Project: run4-v1.0.10.
This report is meant to help explore the results of the derfinder (Collado-Torres, Frazee, Jaffe, and Leek, 2014) package and was generated using regionReport (Collado-Torres, Jaffe, and Leek, 2014) package. While the report is rich, it is meant to just start the exploration of the results and exemplify some of the code used to do so. You will most likely need a more in-depth analysis for your specific data set.
Most plots were made with using ggplot2 (Wickham, 2009).
Theoretically, the p-values should be uniformly distributed between 0 and 1.
## Min. 1st Qu. Median Mean 3rd Qu. Max.
## 0.0001946 0.2162000 0.4159000 0.4413000 0.6498000 0.9990000
This is the numerical summary of the distribution of the p-values.
## Min. 1st Qu. Median Mean 3rd Qu. Max.
## 0.1620 0.5228 0.5228 0.5381 0.5491 0.6335
This is the numerical summary of the distribution of the q-values.
| Cut | Count |
|---|---|
| 0.0001 | 0 |
| 0.0010 | 0 |
| 0.0100 | 0 |
| 0.0250 | 0 |
| 0.0500 | 0 |
| 0.1000 | 0 |
| 0.2000 | 2 |
| 0.3000 | 5 |
| 0.4000 | 18 |
| 0.5000 | 70 |
| 0.6000 | 2350 |
| 0.7000 | 2626 |
| 0.8000 | 2626 |
| 0.9000 | 2626 |
| 1.0000 | 2626 |
This table shows the number of candidate Differentially Expressed Regions (DERs) with q-value less or equal than some commonly used cutoff values.
## Min. 1st Qu. Median Mean 3rd Qu. Max.
## 0.0200 0.4000 0.4100 0.3925 0.4100 0.4100
This is the numerical summary of the distribution of the q-values.
| Cut | Count |
|---|---|
| 0.0001 | 0 |
| 0.0010 | 0 |
| 0.0100 | 0 |
| 0.0250 | 2 |
| 0.0500 | 18 |
| 0.1000 | 37 |
| 0.2000 | 58 |
| 0.3000 | 79 |
| 0.4000 | 697 |
| 0.5000 | 2626 |
| 0.6000 | 2626 |
| 0.7000 | 2626 |
| 0.8000 | 2626 |
| 0.9000 | 2626 |
| 1.0000 | 2626 |
This table shows the number of candidate Differentially Expressed Regions (DERs) with FWER adjusted p-values less or equal than some commonly used cutoff values.
This plot shows the density of the region lengths for all regions.
This plot shows the density of the region areas for all regions.
This plot shows the density of the null region lengths and areas. There were a total of 25698 null regions.
This plot shows the density of the region mean coverage for all regions.
The following plots are MA-style plots comparing each group vs the first one. The mean coverage is calculated using only two groups at a time and is weighted according to the number of samples on each group. Note that the mean coverage and fold change as calculated here do not taking into account the library sizes.
These plots are only shown when there are two or more groups. A total of 4 plot(s) were made.
The following plots were made using ggbio (Yin, Cook, and Lawrence, 2012) which in turn uses ggplot2 (Wickham, 2009). For more details check plotOverview in derfinder (Collado-Torres, Frazee, Jaffe, and Leek, 2014).
This plot shows the genomic locations of the candidate regions found in the analysis. The significant regions (q-value less than 0.1) are highlighted and the area of the regions is shown on top of each chromosome. Note that the area is in a relative scale.
This genomic overview plot shows the annotation region type for the candidate regions. Note that the regions are shown only if the annotation information is available. Below is a table of the actual number of results per annotation region type.
| Region | Count |
|---|---|
| upstream | 630 |
| promoter | 6 |
| overlaps 5' | 0 |
| inside | 636 |
| overlaps 3' | 6 |
| close to 3' | 2 |
| downstream | 797 |
| covers | 0 |
| NA | 549 |
This genomic overview plot shows the annotation region type for the candidate regions that have a q-value less than 0.1. Note that the regions are shown only if the annotation information is available. Plot skipped because there are no significant regions.
Below are the plots for the top 100 candidate DERs as ranked by area. For each plot, annotation is shown if the candidate DER has a minimum overlap of 20 base pairs with annotation information (strand specific). If present, exons are collapsed and shown in blue. Introns are shown in light blue. The title of each plot is composed of the name of the nearest annotation element, the distance to it, and whether the region of the genome the DER falls into; all three pieces of information are based on bumphunter::annotateNearest().
The annotation depends on the Genomic State used. For details on which one was used for this report check the call to mergeResults in the reproducibility details.
Below is a table summarizing the number of genomic states per region.
| Number of Overlapping States | Frequency | State |
|---|---|---|
| 0 | 2277 | exon |
| 1 | 344 | exon |
| 2 | 5 | exon |
| 0 | 1161 | intragenic |
| 1 | 1465 | intragenic |
| 0 | 2298 | intron |
| 1 | 309 | intron |
| 2 | 18 | intron |
| 3 | 1 | intron |
Below is an interactive table with the top 500 regions (out of 2626) as ranked by area. Inf and -Inf are shown as 1e100 and -1e100 respectively.
| areaRank | seqnames | start | end | width | strand | value | area | indexStart | indexEnd | cluster | clusterL | meanCoverage | meanh1 | meanh1.bmp4 | meanh1.mesendoderm | meanh1.msc | meanh1.npc | log2FoldChangeh1.bmp4vsh1 | log2FoldChangeh1.mesendodermvsh1 | log2FoldChangeh1.mscvsh1 | log2FoldChangeh1.npcvsh1 | pvalues | significant | qvalues | significantQval | name | annotation | description | region | distance | subregion | insidedistance | exonnumber | nexons | UTR | annoStrand | geneL | codingL | fwer | significantFWER |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | chr6 | 114743644 | 114747838 | 4195 |
|
45.68984 | 191668.889 | 12440329 | 12444523 | 23 | 5713 | 10109.898 | 2.678570e+04 | 1.342706e+01 | 2.374911e+04 | 2.648391e-01 | 9.871275e-01 | -1.096210e+01 | -1.735892e-01 | -1.662599e+01 | -1.472787e+01 | 0.0001946 | TRUE | 0.1619899 | FALSE | HS3ST5 | NM_153612 NP_705840 XM_006715379 XP_006715442 | upstream | upstream | 80104 | NA | NA | NA | 5 | NA |
|
286790 | 5588 | 0.02 | TRUE |
| 2 | chr3 | 54669829 | 54673866 | 4038 |
|
41.67070 | 168266.300 | 7023070 | 7027107 | 12 | 7966 | 15337.757 | 4.698365e+04 | 6.062927e+01 | 2.957462e+04 | 7.341134e+00 | 6.253987e+01 | -9.597929e+00 | -6.677992e-01 | -1.264387e+01 | -9.553167e+00 | 0.0001946 | TRUE | 0.1619899 | FALSE | ESRG | NR_027122 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.02 | TRUE |
| 3 | chr20 | 38898581 | 38902126 | 3546 |
|
39.82845 | 141231.673 | 4366273 | 4369818 | 10 | 5561 | 6048.769 | 2.142623e+04 | 3.133108e+00 | 8.814309e+03 | 4.272420e-02 | 1.281726e-01 | -1.273950e+01 | -1.281459e+00 | -1.893589e+01 | -1.735093e+01 | 0.0005837 | TRUE | 0.2721431 | FALSE | MAFB | NM_005461 NP_005452 | downstream | downstream | 415750 | NA | NA | NA | 1 | NA |
|
3359 | 971 | 0.03 | TRUE |
| 4 | chr16 | 65263750 | 65267086 | 3337 |
|
42.23135 | 140926.020 | 8136502 | 8139838 | 11 | 5144 | 7540.379 | 2.005473e+04 | 8.788583e+00 | 1.763629e+04 | 8.020677e-01 | 1.284987e+00 | -1.115602e+01 | -1.853958e-01 | -1.460986e+01 | -1.392990e+01 | 0.0006615 | TRUE | 0.2721431 | FALSE | LINC00922 | NM_001101346 NR_027755 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.04 | TRUE |
| 5 | chr12 | 59717007 | 59720598 | 3592 |
|
34.94620 | 125526.749 | 8411590 | 8415181 | 15 | 5621 | 4262.394 | 1.545390e+04 | 3.752366e+00 | 5.850282e+03 | 2.000557e+00 | 2.040785e+00 | -1.200788e+01 | -1.401392e+00 | -1.291528e+01 | -1.288656e+01 | 0.0008172 | TRUE | 0.2721431 | FALSE | SLC16A7 | NM_001270622 NM_001270623 NM_004731 NP_001257551 NP_001257552 NP_004722 NR_073055 NR_073056 XM_005269231 XM_006719693 XP_005269288 XP_006719756 | upstream | upstream | 269223 | NA | NA | NA | 6 | NA |
|
193814 | 74877 | 0.04 | TRUE |
| 6 | chr7 | 83092153 | 83094655 | 2503 |
|
42.92514 | 107441.634 | 9197710 | 9200212 | 13 | 5357 | 7854.302 | 2.115698e+04 | 6.093288e+00 | 1.810757e+04 | 2.622853e-01 | 6.052737e-01 | -1.176163e+01 | -2.245410e-01 | -1.629964e+01 | -1.509319e+01 | 0.0017510 | TRUE | 0.3304594 | FALSE | SEMA3E | NM_001178129 NM_012431 NP_001171600 NP_036563 XM_006716187 XP_006716250 | inside intron | inside | 183824 | inside intron | -1143 | 4 | 17 | inside transcription region |
|
285257 | 280956 | 0.04 | TRUE |
| 7 | chr7 | 83089299 | 83092109 | 2811 |
|
37.18137 | 104516.823 | 9194856 | 9197666 | 13 | 5357 | 5584.961 | 1.480288e+04 | 4.870509e+00 | 1.311620e+04 | 1.045891e-01 | 7.545358e-01 | -1.156952e+01 | -1.745281e-01 | -1.711079e+01 | -1.425993e+01 | 0.0018289 | TRUE | 0.3304594 | FALSE | SEMA3E | NM_001178129 NM_012431 NP_001171600 NP_036563 XM_006716187 XP_006716250 | inside intron | inside | 186370 | inside intron | -3689 | 4 | 17 | inside transcription region |
|
285257 | 280956 | 0.04 | TRUE |
| 8 | chr13 | 56154486 | 56157442 | 2957 |
|
35.27968 | 104322.026 | 4513244 | 4516200 | 12 | 5555 | 4344.186 | 1.714812e+04 | 9.905309e-01 | 4.571339e+03 | 2.561718e-01 | 2.220156e-01 | -1.407949e+01 | -1.907362e+00 | -1.603058e+01 | -1.623703e+01 | 0.0018289 | TRUE | 0.3304594 | FALSE | MIR5007 | NR_049804 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.04 | TRUE |
| 9 | chrX | 91355281 | 91358419 | 3139 |
|
32.82028 | 103022.864 | 6902562 | 6905700 | 13 | 5524 | 3829.454 | 1.235957e+04 | 2.412663e+01 | 6.761252e+03 | 7.883084e-01 | 1.528353e+00 | -9.000787e+00 | -8.702668e-01 | -1.393651e+01 | -1.298136e+01 | 0.0018289 | TRUE | 0.3304594 | FALSE | PCDH11X | NM_001168360 NM_001168361 NM_001168362 NM_001168363 NM_014522 NM_032967 NM_032968 NM_032969 NP_001161832 NP_001161833 NP_001161834 NP_001161835 NP_055337 NP_116749 NP_116750 NP_116751 | inside intron | inside | 264821 | inside intron | 97955 | 3 | 7 | inside transcription region |
|
787768 | 632811 | 0.04 | TRUE |
| 10 | chr1 | 223199730 | 223201702 | 1973 |
|
47.92945 | 94564.806 | 28748920 | 28750892 | 40 | 5414 | 15059.155 | 2.933128e+04 | 1.722892e+02 | 4.578983e+04 | 6.398885e-01 | 1.740497e+00 | -7.411464e+00 | 6.425871e-01 | -1.548426e+01 | -1.404065e+01 | 0.0019845 | TRUE | 0.3304594 | FALSE | DISP1 | NM_032890 NP_116279 XM_005273335 XM_005273336 XM_006711592 XM_006711593 XM_006711594 XM_006711595 XP_005273392 XP_005273393 XP_006711655 XP_006711656 XP_006711657 XP_006711658 | downstream | downstream | 211299 | NA | NA | NA | 10 | NA |
|
190906 | 63148 | 0.04 | TRUE |
| 11 | chr4 | 180089193 | 180091351 | 2159 |
|
39.48598 | 85250.221 | 15658562 | 15660720 | 49 | 3684 | 5911.772 | 1.752941e+04 | 6.785549e-01 | 1.202754e+04 | 0.000000e+00 | 1.228578e+00 | -1.465695e+01 | -5.434361e-01 | -1.000000e+100 | -1.380050e+01 | 0.0025293 | TRUE | 0.3617775 | FALSE | LINC01098 | NM_001085490 NR_028342 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.04 | TRUE |
| 12 | chr13 | 51747208 | 51748903 | 1696 |
|
49.24998 | 83527.969 | 3858043 | 3859738 | 6 | 5837 | 13266.503 | 3.402886e+04 | 2.677182e+00 | 3.229929e+04 | 3.573113e-01 | 1.329304e+00 | -1.363376e+01 | -7.525640e-02 | -1.653922e+01 | -1.464380e+01 | 0.0026071 | TRUE | 0.3617775 | FALSE | LINC00371 | NR_102431 NR_102432 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.04 | TRUE |
| 13 | chr1 | 223197943 | 223199471 | 1529 |
|
48.97254 | 74879.010 | 28747133 | 28748661 | 40 | 5414 | 19662.167 | 3.814555e+04 | 2.237462e+02 | 5.993613e+04 | 2.378025e+00 | 3.036952e+00 | -7.413507e+00 | 6.519113e-01 | -1.396946e+01 | -1.361660e+01 | 0.0031519 | TRUE | 0.3851760 | FALSE | DISP1 | NM_032890 NP_116279 XM_005273335 XM_005273336 XM_006711592 XM_006711593 XM_006711594 XM_006711595 XP_005273392 XP_005273393 XP_006711655 XP_006711656 XP_006711657 XP_006711658 | downstream | downstream | 209512 | NA | NA | NA | 10 | NA |
|
190906 | 63148 | 0.04 | TRUE |
| 14 | chr4 | 180087668 | 180089098 | 1431 |
|
50.33258 | 72025.928 | 15657037 | 15658467 | 49 | 3684 | 13586.016 | 3.980034e+04 | 4.162823e+00 | 2.812396e+04 | 9.175402e-01 | 7.058001e-01 | -1.322293e+01 | -5.009809e-01 | -1.540465e+01 | -1.578316e+01 | 0.0035410 | TRUE | 0.3851760 | FALSE | LINC01098 | NM_001085490 NR_028342 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.04 | TRUE |
| 15 | chr3 | 112139899 | 112141745 | 1847 |
|
38.46586 | 71046.442 | 10614296 | 10616142 | 20 | 4830 | 5863.223 | 2.149578e+04 | 1.684732e+01 | 7.803325e+03 | 5.468330e-02 | 1.093665e-01 | -1.031732e+01 | -1.461892e+00 | -1.858452e+01 | -1.758452e+01 | 0.0037745 | TRUE | 0.3851760 | FALSE | BTLA | NM_001085357 NM_181780 NP_001078826 NP_861445 XM_005247136 XP_005247193 | downstream | downstream | 76663 | NA | NA | NA | 5 | NA |
|
35595 | 33250 | 0.04 | TRUE |
| 16 | chrY | 5811789 | 5814021 | 2233 |
|
31.61959 | 70606.549 | 689344 | 691576 | 4 | 4710 | 3079.194 | 9.467293e+03 | 7.689207e-01 | 5.926987e+03 | 4.523060e-02 | 8.772951e-01 | -1.358783e+01 | -6.756530e-01 | -1.767529e+01 | -1.339760e+01 | 0.0038523 | TRUE | 0.3851760 | FALSE | PCDH11Y | NM_001278619 NM_032971 NM_032972 NM_032973 NP_001265548 NP_116753 NP_116754 NP_116755 | downstream | downstream | 887658 | NA | NA | NA | 5 | NA |
|
686133 | 681118 | 0.04 | TRUE |
| 17 | chr16 | 65267122 | 65268893 | 1772 |
|
37.48242 | 66418.857 | 8139874 | 8141645 | 11 | 5144 | 5228.242 | 1.329795e+04 | 2.907449e+00 | 1.284018e+04 | 0.000000e+00 | 1.709932e-01 | -1.215916e+01 | -5.053880e-02 | -1.000000e+100 | -1.624691e+01 | 0.0041636 | TRUE | 0.3851760 | FALSE | LINC00922 | NM_001101346 NR_027755 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.04 | TRUE |
| 18 | chrX | 113703661 | 113705255 | 1595 |
|
41.54784 | 66268.803 | 9176606 | 9178200 | 24 | 5710 | 7736.595 | 2.855289e+04 | 8.850784e+00 | 1.011912e+04 | 8.833856e-01 | 1.234796e+00 | -1.165554e+01 | -1.496554e+00 | -1.498023e+01 | -1.449708e+01 | 0.0041636 | TRUE | 0.3851760 | FALSE | HTR2C | NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690 | upstream | upstream | 113296 | NA | NA | NA | 6 | NA |
|
326073 | 180632 | 0.04 | TRUE |
| 19 | chr9 | 99977864 | 99979500 | 1637 |
|
34.99459 | 57286.141 | 9815632 | 9817268 | 16 | 5375 | 4574.797 | 1.565454e+04 | 9.132865e+00 | 7.206888e+03 | 7.403787e-01 | 2.683873e+00 | -1.074323e+01 | -1.119133e+00 | -1.436796e+01 | -1.250998e+01 | 0.0057979 | TRUE | 0.4211738 | FALSE | LOC100499484 | NR_036526 | NA | NA | 0 | NA | NA | NA | 16 | NA |
|
0 | 0 | 0.06 | FALSE |
| 20 | chr6 | 114747858 | 114749088 | 1231 |
|
45.29144 | 55753.764 | 12444543 | 12445773 | 23 | 5713 | 11443.697 | 3.021517e+04 | 8.368806e+00 | 2.699453e+04 | 0.000000e+00 | 4.069862e-01 | -1.181796e+01 | -1.626060e-01 | -1.000000e+100 | -1.617993e+01 | 0.0060314 | TRUE | 0.4211738 | FALSE | HS3ST5 | NM_153612 NP_705840 XM_006715379 XP_006715442 | upstream | upstream | 84318 | NA | NA | NA | 5 | NA |
|
286790 | 5588 | 0.06 | FALSE |
| 21 | chr1 | 223201905 | 223203189 | 1285 |
|
43.07772 | 55354.873 | 28751095 | 28752379 | 40 | 5414 | 10091.384 | 2.011751e+04 | 1.087938e+02 | 3.022980e+04 | 7.817121e-01 | 3.929960e-02 | -7.530712e+00 | 5.875199e-01 | -1.465145e+01 | -1.896551e+01 | 0.0061092 | TRUE | 0.4211738 | FALSE | DISP1 | NM_032890 NP_116279 XM_005273335 XM_005273336 XM_006711592 XM_006711593 XM_006711594 XM_006711595 XP_005273392 XP_005273393 XP_006711655 XP_006711656 XP_006711657 XP_006711658 | downstream | downstream | 213474 | NA | NA | NA | 10 | NA |
|
190906 | 63148 | 0.06 | FALSE |
| 22 | chr13 | 56152333 | 56153739 | 1407 |
|
39.32726 | 55333.456 | 4511144 | 4512550 | 12 | 5555 | 6305.571 | 2.477762e+04 | 4.182303e+00 | 6.744273e+03 | 5.383795e-01 | 1.245913e+00 | -1.253245e+01 | -1.877303e+00 | -1.549005e+01 | -1.427955e+01 | 0.0061092 | TRUE | 0.4211738 | FALSE | MIR5007 | NR_049804 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.06 | FALSE |
| 23 | chr3 | 112137303 | 112138546 | 1244 |
|
44.10737 | 54869.570 | 10611700 | 10612943 | 20 | 4830 | 9772.442 | 3.583162e+04 | 1.866712e+02 | 1.284379e+04 | 4.059490e-02 | 8.118970e-02 | -7.584590e+00 | -1.480162e+00 | -1.975151e+01 | -1.875151e+01 | 0.0062648 | TRUE | 0.4211738 | FALSE | BTLA | NM_001085357 NM_181780 NP_001078826 NP_861445 XM_005247136 XP_005247193 | downstream | downstream | 79862 | NA | NA | NA | 5 | NA |
|
35595 | 33250 | 0.06 | FALSE |
| 24 | chr3 | 46622622 | 46623949 | 1328 |
|
39.57793 | 52559.495 | 5033626 | 5034953 | 11 | 4701 | 7461.466 | 2.022045e+04 | 1.882530e+00 | 1.708480e+04 | 1.901355e-01 | 0.000000e+00 | -1.339085e+01 | -2.431015e-01 | -1.669843e+01 | -1.000000e+100 | 0.0064205 | TRUE | 0.4211738 | FALSE | TDGF1 | NM_001174136 NM_003212 NP_001167607 NP_003203 | inside exon | inside | 3546 | inside exon | 0 | 6 | 6 | overlaps 3'UTR |
|
4876 | 3280 | 0.06 | FALSE |
| 25 | chr20 | 12735336 | 12736818 | 1483 |
|
34.09492 | 50562.760 | 1447212 | 1448694 | 3 | 8409 | 3925.830 | 1.499198e+04 | 2.568105e+00 | 4.633005e+03 | 2.724208e-01 | 1.322320e+00 | -1.251120e+01 | -1.694171e+00 | -1.574799e+01 | -1.346883e+01 | 0.0064983 | TRUE | 0.4211738 | FALSE | SPTLC3 | NM_018327 NP_060797 XR_244218 | upstream | upstream | 252809 | NA | NA | NA | 2 | NA |
|
41189 | 40087 | 0.06 | FALSE |
| 26 | chr2 | 189876354 | 189877472 | 1119 |
|
44.06981 | 49314.116 | 20142419 | 20143537 | 41 | 27987 | 26591.306 | 2.190348e+00 | 2.050964e+04 | 8.570152e-01 | 1.124416e+05 | 2.212243e+00 | 1.319285e+01 | -1.353768e+00 | 1.564766e+01 | 1.434950e-02 | 0.0065761 | TRUE | 0.4211738 | FALSE | COL3A1 | NM_000090 NP_000081 | inside exon | inside | 37255 | inside exon | 0 | 51 | 51 | overlaps 3'UTR |
|
38373 | 37284 | 0.06 | FALSE |
| 27 | chr19 | 54337445 | 54339006 | 1562 |
|
30.85261 | 48191.775 | 14738671 | 14740232 | 10 | 5816 | 3182.019 | 1.242850e+04 | 3.054770e+01 | 3.450286e+03 | 2.909731e-01 | 4.705506e-01 | -8.668373e+00 | -1.848864e+00 | -1.538241e+01 | -1.468894e+01 | 0.0071209 | TRUE | 0.4218938 | FALSE | NLRP12 | NM_001277126 NM_001277129 NM_033297 NM_144687 NP_001264055 NP_001264058 NP_653288 | upstream | upstream | 9788 | NA | NA | NA | 10 | NA |
|
30802 | 30125 | 0.06 | FALSE |
| 28 | chr14 | 101200486 | 101201471 | 986 |
|
45.83510 | 45193.406 | 9362988 | 9363973 | 17 | 8209 | 29749.266 | 1.824544e+01 | 6.052941e+01 | 1.219270e+01 | 1.716522e+03 | 1.469388e+05 | 1.730101e+00 | -5.815183e-01 | 6.555809e+00 | 1.297539e+01 | 0.0073544 | TRUE | 0.4218938 | FALSE | DLK1 | NM_001032997 NM_003836 NP_003827 | overlaps 3' | overlaps 3' | 7284 | inside exon | 0 | 5 | 5 | overlaps 3'UTR |
|
8265 | 7827 | 0.06 | FALSE |
| 29 | chr12 | 14859835 | 14861151 | 1317 |
|
32.73786 | 43115.767 | 2902857 | 2904173 | 11 | 5086 | 3501.021 | 1.070951e+04 | 4.726272e+00 | 6.786526e+03 | 2.385725e+00 | 1.955581e+00 | -1.114590e+01 | -6.581476e-01 | -1.213218e+01 | -1.241901e+01 | 0.0077435 | TRUE | 0.4218938 | FALSE | GUCY2C | NM_004963 NP_004954 | upstream | upstream | 10316 | NA | NA | NA | 27 | NA |
|
83951 | 83331 | 0.07 | FALSE |
| 30 | chrX | 91358884 | 91360146 | 1263 |
|
33.46858 | 42270.822 | 6906165 | 6907427 | 13 | 5524 | 3619.294 | 1.097615e+04 | 1.079810e+01 | 7.109364e+03 | 0.000000e+00 | 1.599367e-01 | -9.989379e+00 | -6.265796e-01 | -1.000000e+100 | -1.606651e+01 | 0.0081326 | TRUE | 0.4218938 | FALSE | PCDH11X | NM_001168360 NM_001168361 NM_001168362 NM_001168363 NM_014522 NM_032967 NM_032968 NM_032969 NP_001161832 NP_001161833 NP_001161834 NP_001161835 NP_055337 NP_116749 NP_116750 NP_116751 | inside intron | inside | 268424 | inside intron | 96228 | 3 | 7 | inside transcription region |
|
787768 | 632811 | 0.07 | FALSE |
| 31 | chr2 | 77319847 | 77321265 | 1419 |
|
29.68853 | 42128.030 | 8907400 | 8908818 | 21 | 5816 | 2836.073 | 1.167112e+04 | 1.234109e+01 | 2.495767e+03 | 7.117690e-02 | 1.067653e+00 | -9.885258e+00 | -2.225388e+00 | -1.732310e+01 | -1.341621e+01 | 0.0081326 | TRUE | 0.4218938 | FALSE | LRRTM4 | NM_001134745 NM_001282924 NM_001282928 NM_024993 NP_001128217 NP_001269853 NP_001269857 NP_079269 | inside intron | inside | 428237 | inside intron | 343805 | 4 | 4 | inside transcription region |
|
774652 | 772976 | 0.07 | FALSE |
| 32 | chr2 | 77316359 | 77317685 | 1327 |
|
31.39538 | 41661.673 | 8903912 | 8905238 | 21 | 5816 | 3309.266 | 1.332558e+04 | 7.209495e+00 | 3.212057e+03 | 0.000000e+00 | 1.484175e+00 | -1.085201e+01 | -2.052629e+00 | -1.000000e+100 | -1.313225e+01 | 0.0081326 | TRUE | 0.4218938 | FALSE | LRRTM4 | NM_001134745 NM_001282924 NM_001282928 NM_024993 NP_001128217 NP_001269853 NP_001269857 NP_079269 | inside intron | inside | 431817 | inside intron | 340317 | 4 | 4 | inside transcription region |
|
774652 | 772976 | 0.07 | FALSE |
| 33 | chr13 | 51745692 | 51746733 | 1042 |
|
38.03860 | 39636.224 | 3856527 | 3857568 | 6 | 5837 | 6614.912 | 1.616952e+04 | 1.647793e+00 | 1.689971e+04 | 4.846450e-02 | 3.634837e+00 | -1.326045e+01 | 6.372130e-02 | -1.834792e+01 | -1.211910e+01 | 0.0089109 | TRUE | 0.4218938 | FALSE | LINC00371 | NR_102431 NR_102432 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.08 | FALSE |
| 34 | chr3 | 54668711 | 54669826 | 1116 |
|
35.23096 | 39317.753 | 7021952 | 7023067 | 12 | 7966 | 4121.927 | 1.493856e+04 | 8.009857e+00 | 5.662573e+03 | 1.357527e-01 | 3.570789e-01 | -1.086498e+01 | -1.399511e+00 | -1.674770e+01 | -1.535244e+01 | 0.0091443 | TRUE | 0.4218938 | FALSE | ESRG | NR_027122 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.08 | FALSE |
| 35 | chr12 | 14858399 | 14859410 | 1012 |
|
38.44192 | 38903.228 | 2901421 | 2902432 | 11 | 5086 | 5582.549 | 1.639089e+04 | 8.333498e+00 | 1.151053e+04 | 6.986166e-01 | 2.295454e+00 | -1.094168e+01 | -5.099407e-01 | -1.451803e+01 | -1.280183e+01 | 0.0094556 | TRUE | 0.4218938 | FALSE | GUCY2C | NM_004963 NP_004954 | upstream | upstream | 8880 | NA | NA | NA | 27 | NA |
|
83951 | 83331 | 0.09 | FALSE |
| 36 | chr20 | 12739259 | 12740239 | 981 |
|
38.39673 | 37667.188 | 1451135 | 1452115 | 3 | 8409 | 6041.663 | 2.236485e+04 | 1.065596e+01 | 7.831519e+03 | 0.000000e+00 | 1.286952e+00 | -1.103536e+01 | -1.513869e+00 | -1.000000e+100 | -1.408499e+01 | 0.0096113 | TRUE | 0.4218938 | FALSE | SPTLC3 | NM_018327 NP_060797 XR_244218 | upstream | upstream | 249388 | NA | NA | NA | 2 | NA |
|
41189 | 40087 | 0.09 | FALSE |
| 37 | chr2 | 77318093 | 77319353 | 1261 |
|
29.76274 | 37530.815 | 8905646 | 8906906 | 21 | 5816 | 2904.682 | 1.173164e+04 | 1.194528e+01 | 2.777663e+03 | 1.081285e+00 | 1.081285e+00 | -9.939748e+00 | -2.078461e+00 | -1.340537e+01 | -1.340537e+01 | 0.0097669 | TRUE | 0.4218938 | FALSE | LRRTM4 | NM_001134745 NM_001282924 NM_001282928 NM_024993 NP_001128217 NP_001269853 NP_001269857 NP_079269 | inside intron | inside | 430149 | inside intron | 342051 | 4 | 4 | inside transcription region |
|
774652 | 772976 | 0.10 | FALSE |
| 38 | chr3 | 54666148 | 54667077 | 930 |
|
39.64343 | 36868.391 | 7019389 | 7020318 | 12 | 7966 | 6957.291 | 2.041209e+04 | 7.511290e+00 | 1.436563e+04 | 0.000000e+00 | 1.225269e+00 | -1.140808e+01 | -5.068028e-01 | -1.000000e+100 | -1.402404e+01 | 0.0103895 | TRUE | 0.4218938 | FALSE | ESRG | NR_027122 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.12 | FALSE |
| 39 | chr20 | 12736902 | 12737934 | 1033 |
|
35.22387 | 36386.255 | 1448778 | 1449810 | 3 | 8409 | 4825.570 | 1.837984e+04 | 2.540174e+00 | 5.742647e+03 | 3.422072e-01 | 2.480155e+00 | -1.282091e+01 | -1.678337e+00 | -1.571289e+01 | -1.285541e+01 | 0.0106230 | TRUE | 0.4218938 | FALSE | SPTLC3 | NM_018327 NP_060797 XR_244218 | upstream | upstream | 251693 | NA | NA | NA | 2 | NA |
|
41189 | 40087 | 0.13 | FALSE |
| 40 | chr20 | 38902176 | 38902851 | 676 |
|
53.31317 | 36039.700 | 4369868 | 4370543 | 10 | 5561 | 19439.474 | 6.892029e+04 | 1.219157e+01 | 2.826332e+04 | 6.723373e-01 | 8.964497e-01 | -1.246483e+01 | -1.285998e+00 | -1.664538e+01 | -1.623035e+01 | 0.0106230 | TRUE | 0.4218938 | FALSE | MAFB | NM_005461 NP_005452 | downstream | downstream | 415025 | NA | NA | NA | 1 | NA |
|
3359 | 971 | 0.13 | FALSE |
| 41 | chr13 | 43443665 | 43444574 | 910 |
|
39.38160 | 35837.254 | 2781854 | 2782763 | 5 | 6717 | 5911.284 | 1.951382e+04 | 1.873077e+00 | 1.004017e+04 | 0.000000e+00 | 5.549451e-01 | -1.334680e+01 | -9.587115e-01 | -1.000000e+100 | -1.510179e+01 | 0.0107008 | TRUE | 0.4218938 | FALSE | EPSTI1 | NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959 | downstream | downstream | 121833 | NA | NA | NA | 13 | NA |
|
105883 | 103915 | 0.13 | FALSE |
| 42 | chr13 | 43445103 | 43446160 | 1058 |
|
33.71477 | 35670.231 | 2783292 | 2784349 | 5 | 6717 | 3674.164 | 1.183978e+04 | 1.915879e+00 | 6.527310e+03 | 9.546310e-02 | 1.713611e+00 | -1.259335e+01 | -8.590824e-01 | -1.692027e+01 | -1.275432e+01 | 0.0107786 | TRUE | 0.4218938 | FALSE | EPSTI1 | NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959 | downstream | downstream | 120247 | NA | NA | NA | 13 | NA |
|
105883 | 103915 | 0.13 | FALSE |
| 43 | chr3 | 112138937 | 112139692 | 756 |
|
45.27525 | 34228.091 | 10613334 | 10614089 | 20 | 4830 | 10803.498 | 3.925196e+04 | 4.507077e+01 | 1.471753e+04 | 2.137566e+00 | 8.015873e-01 | -9.766357e+00 | -1.415229e+00 | -1.416451e+01 | -1.557955e+01 | 0.0111677 | TRUE | 0.4218938 | FALSE | BTLA | NM_001085357 NM_181780 NP_001078826 NP_861445 XM_005247136 XP_005247193 | downstream | downstream | 78716 | NA | NA | NA | 5 | NA |
|
35595 | 33250 | 0.14 | FALSE |
| 44 | chr16 | 13446582 | 13447737 | 1156 |
|
29.50583 | 34108.734 | 2740906 | 2742061 | 5 | 5109 | 2593.724 | 9.482847e+03 | 2.121540e+00 | 3.482998e+03 | 0.000000e+00 | 6.552768e-01 | -1.212599e+01 | -1.444991e+00 | -1.000000e+100 | -1.382093e+01 | 0.0113234 | TRUE | 0.4218938 | FALSE | SHISA9 | NM_001145204 NM_001145205 NP_001138676 NP_001138677 XM_005255539 XP_005255596 | downstream | downstream | 451105 | NA | NA | NA | 5 | NA |
|
338796 | 333344 | 0.15 | FALSE |
| 45 | chrX | 113702592 | 113703534 | 943 |
|
35.67699 | 33643.405 | 9175537 | 9176479 | 24 | 5710 | 4351.814 | 1.649177e+04 | 1.927890e+00 | 5.265227e+03 | 0.000000e+00 | 1.505832e-01 | -1.306244e+01 | -1.647178e+00 | -1.000000e+100 | -1.674083e+01 | 0.0114012 | TRUE | 0.4218938 | FALSE | HTR2C | NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690 | upstream | upstream | 115017 | NA | NA | NA | 6 | NA |
|
326073 | 180632 | 0.15 | FALSE |
| 46 | chrX | 113701754 | 113702573 | 820 |
|
39.37737 | 32289.446 | 9174699 | 9175518 | 24 | 5710 | 6245.835 | 2.319275e+04 | 4.387805e+00 | 8.031000e+03 | 2.463415e-01 | 7.884146e-01 | -1.236789e+01 | -1.530023e+00 | -1.652266e+01 | -1.484436e+01 | 0.0118682 | TRUE | 0.4296254 | FALSE | HTR2C | NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690 | upstream | upstream | 115978 | NA | NA | NA | 6 | NA |
|
326073 | 180632 | 0.15 | FALSE |
| 47 | chr12 | 59720981 | 59721796 | 816 |
|
36.82290 | 30047.488 | 8415564 | 8416379 | 15 | 5621 | 4784.554 | 1.656842e+04 | 9.901961e-01 | 7.350127e+03 | 6.188730e-02 | 3.173407e+00 | -1.403036e+01 | -1.172595e+00 | -1.803036e+01 | -1.235012e+01 | 0.0138138 | TRUE | 0.4629966 | FALSE | SLC16A7 | NM_001270622 NM_001270623 NM_004731 NP_001257551 NP_001257552 NP_004722 NR_073055 NR_073056 XM_005269231 XM_006719693 XP_005269288 XP_006719756 | upstream | upstream | 268025 | NA | NA | NA | 6 | NA |
|
193814 | 74877 | 0.20 | FALSE |
| 48 | chr9 | 96110667 | 96111632 | 966 |
|
29.82942 | 28815.223 | 8985901 | 8986866 | 14 | 5407 | 2528.552 | 9.300250e+03 | 5.745342e-01 | 3.341883e+03 | 0.000000e+00 | 5.227740e-02 | -1.398259e+01 | -1.476608e+00 | -1.000000e+100 | -1.744072e+01 | 0.0145920 | TRUE | 0.4629966 | FALSE | C9orf129 | NM_001098808 NP_001092278 XM_006717117 XP_006717180 | promoter | promoter | 1971 | NA | NA | NA | 5 | NA |
|
28215 | 17555 | 0.20 | FALSE |
| 49 | chr12 | 91501895 | 91502777 | 883 |
|
32.04780 | 28298.212 | 10932604 | 10933486 | 28 | 3324 | 9140.618 | 0.000000e+00 | 1.961170e+04 | 2.978482e-01 | 2.606243e+04 | 2.867101e+01 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 0.0146698 | TRUE | 0.4629966 | FALSE | LUM | NM_002345 NP_002336 | inside exon | inside | 2765 | inside exon | 0 | 2 | 3 | overlaps 5' UTR |
|
8310 | 4814 | 0.20 | FALSE |
| 50 | chr10 | 53796050 | 53796872 | 823 |
|
33.83028 | 27842.321 | 5493670 | 5494492 | 7 | 5594 | 3959.730 | 1.314923e+04 | 8.654314e+00 | 6.635670e+03 | 1.534022e+00 | 3.558931e+00 | -1.056927e+01 | -9.866648e-01 | -1.306537e+01 | -1.185125e+01 | 0.0149033 | TRUE | 0.4629966 | FALSE | PRKG1 | NM_001098512 NM_006258 NP_001091982 NP_006249 XM_005269970 XM_005269971 XM_005269972 XP_005270027 XP_005270028 XP_005270029 | inside intron | inside | 961816 | inside intron | 17372 | 6 | 18 | inside transcription region |
|
1223876 | 1219309 | 0.20 | FALSE |
| 51 | chr8 | 42032754 | 42033669 | 916 |
|
30.05498 | 27530.365 | 4917787 | 4918702 | 7 | 17976 | 10880.047 | 1.283843e+02 | 7.289629e+01 | 7.078057e+01 | 5.403957e+04 | 8.859771e+01 | -8.165513e-01 | -8.590433e-01 | 8.717404e+00 | -5.351273e-01 | 0.0150590 | TRUE | 0.4629966 | FALSE | PLAT | NM_000930 NM_000931 NM_033011 NP_000921 NP_127509 | inside exon | inside | 31525 | inside exon | 0 | 11 | 11 | overlaps 3'UTR |
|
32958 | 17192 | 0.20 | FALSE |
| 52 | chrX | 113705708 | 113706402 | 695 |
|
39.53324 | 27475.602 | 9178653 | 9179347 | 24 | 5710 | 6092.398 | 2.344471e+04 | 2.111511e+00 | 7.014391e+03 | 0.000000e+00 | 7.776978e-01 | -1.343870e+01 | -1.740873e+00 | -1.000000e+100 | -1.487969e+01 | 0.0150590 | TRUE | 0.4629966 | FALSE | HTR2C | NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690 | upstream | upstream | 112149 | NA | NA | NA | 6 | NA |
|
326073 | 180632 | 0.20 | FALSE |
| 53 | chr13 | 51744860 | 51745575 | 716 |
|
37.94642 | 27169.636 | 3855695 | 3856410 | 6 | 5837 | 5121.421 | 1.273524e+04 | 2.115922e-01 | 1.287137e+04 | 1.410615e-01 | 1.410615e-01 | -1.587718e+01 | 1.533860e-02 | -1.646214e+01 | -1.646214e+01 | 0.0152146 | TRUE | 0.4629966 | FALSE | LINC00371 | NR_102431 NR_102432 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.20 | FALSE |
| 54 | chr19 | 54339110 | 54339902 | 793 |
|
33.86311 | 26853.447 | 14740336 | 14741128 | 10 | 5816 | 4576.323 | 1.798254e+04 | 3.564817e+01 | 4.863298e+03 | 0.000000e+00 | 1.273644e-01 | -8.978553e+00 | -1.886590e+00 | -1.000000e+100 | -1.710727e+01 | 0.0152924 | TRUE | 0.4629966 | FALSE | NLRP12 | NM_001277126 NM_001277129 NM_033297 NM_144687 NP_001264055 NP_001264058 NP_653288 | upstream | upstream | 11453 | NA | NA | NA | 10 | NA |
|
30802 | 30125 | 0.20 | FALSE |
| 55 | chrY | 5810169 | 5811120 | 952 |
|
28.17944 | 26826.827 | 687724 | 688675 | 4 | 4710 | 2124.968 | 6.470268e+03 | 0.000000e+00 | 4.154574e+03 | 0.000000e+00 | 0.000000e+00 | -1.000000e+100 | -6.391250e-01 | -1.000000e+100 | -1.000000e+100 | 0.0152924 | TRUE | 0.4629966 | FALSE | PCDH11Y | NM_001278619 NM_032971 NM_032972 NM_032973 NP_001265548 NP_116753 NP_116754 NP_116755 | downstream | downstream | 886038 | NA | NA | NA | 5 | NA |
|
686133 | 681118 | 0.20 | FALSE |
| 56 | chr5 | 126177401 | 126178273 | 873 |
|
29.68796 | 25917.586 | 11958598 | 11959470 | 23 | 5984 | 2763.606 | 1.099494e+04 | 5.181558e+00 | 2.815971e+03 | 2.302405e-01 | 1.709622e+00 | -1.105117e+01 | -1.965135e+00 | -1.554334e+01 | -1.265087e+01 | 0.0159928 | TRUE | 0.4636263 | FALSE | LMNB1 | NM_001198557 NM_005573 NP_001185486 NP_005564 | downstream | downstream | 65086 | NA | NA | NA | 11 | NA |
|
60397 | 58755 | 0.20 | FALSE |
| 57 | chr6 | 126025296 | 126026112 | 817 |
|
31.67800 | 25880.928 | 13418336 | 13419152 | 35 | 5548 | 3738.113 | 1.155828e+04 | 1.942228e+01 | 7.109034e+03 | 6.150551e-01 | 3.214198e+00 | -9.216999e+00 | -7.012014e-01 | -1.419785e+01 | -1.181218e+01 | 0.0159928 | TRUE | 0.4636263 | FALSE | RP1-293L8.2 | NR_038906 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.20 | FALSE |
| 58 | chr19 | 54339935 | 54340563 | 629 |
|
39.95045 | 25128.831 | 14741161 | 14741789 | 10 | 5816 | 7873.913 | 3.154147e+04 | 5.725358e+01 | 7.770436e+03 | 8.028620e-02 | 3.211447e-01 | -9.105669e+00 | -2.021183e+00 | -1.858367e+01 | -1.658367e+01 | 0.0161485 | TRUE | 0.4636263 | FALSE | NLRP12 | NM_001277126 NM_001277129 NM_033297 NM_144687 NP_001264055 NP_001264058 NP_653288 | upstream | upstream | 12278 | NA | NA | NA | 10 | NA |
|
30802 | 30125 | 0.20 | FALSE |
| 59 | chr12 | 91497324 | 91498096 | 773 |
|
31.54829 | 24386.830 | 10928145 | 10928917 | 27 | 773 | 8802.313 | 0.000000e+00 | 1.951036e+04 | 6.934023e-01 | 2.447242e+04 | 2.808926e+01 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 0.0171602 | TRUE | 0.4769408 | FALSE | LUM | NM_002345 NP_002336 | inside exon | inside | 7446 | inside exon | 0 | 3 | 3 | overlaps 3'UTR |
|
8310 | 4814 | 0.21 | FALSE |
| 60 | chr4 | 88852622 | 88853235 | 614 |
|
38.84404 | 23850.238 | 8287102 | 8287715 | 19 | 5968 | 7636.154 | 2.205431e+04 | 9.840472e+01 | 1.602698e+04 | 8.224760e-02 | 9.869707e-01 | -7.808117e+00 | -4.605580e-01 | -1.803266e+01 | -1.444769e+01 | 0.0173158 | TRUE | 0.4769408 | FALSE | SPP1 | NM_000582 NM_001040058 NM_001040060 NM_001251829 NM_001251830 NP_000573 NP_001035147 NP_001035149 NP_001238758 NP_001238759 | upstream | upstream | 43567 | NA | NA | NA | 7 | NA |
|
7761 | 6000 | 0.21 | FALSE |
| 61 | chr4 | 1160721 | 1161444 | 724 |
|
32.59108 | 23595.940 | 489693 | 490416 | 1 | 5842 | 12587.806 | 5.971064e+01 | 2.053736e+02 | 5.566298e+00 | 6.255169e+04 | 1.166851e+02 | 1.782191e+00 | -3.423198e+00 | 1.003285e+01 | 9.665603e-01 | 0.0174715 | TRUE | 0.4769408 | FALSE | SPON2 | NM_001128325 NM_001199021 NM_012445 NP_001121797 NP_001185950 NP_036577 | overlaps 3' | overlaps 3' | 3830 | inside exon | 0 | 2 | 2 | 3'UTR |
|
4551 | 887 | 0.21 | FALSE |
| 62 | chr6 | 132240585 | 132241372 | 788 |
|
29.24542 | 23045.394 | 13987988 | 13988775 | 42 | 1116 | 2380.382 | 8.627980e+03 | 2.563452e-01 | 3.273673e+03 | 0.000000e+00 | 0.000000e+00 | -1.503865e+01 | -1.398113e+00 | -1.000000e+100 | -1.000000e+100 | 0.0184054 | TRUE | 0.4905980 | FALSE | ENPP1 | NM_006208 NP_006199 XM_005267017 XP_005267074 | downstream | downstream | 111429 | NA | NA | NA | 25 | NA |
|
87139 | 82475 | 0.21 | FALSE |
| 63 | chr13 | 43442807 | 43443357 | 551 |
|
41.49560 | 22864.078 | 2781159 | 2781709 | 5 | 6717 | 7296.915 | 2.398613e+04 | 5.190563e+00 | 1.249146e+04 | 1.146098e+00 | 6.406534e-01 | -1.217402e+01 | -9.412582e-01 | -1.435318e+01 | -1.519230e+01 | 0.0185610 | TRUE | 0.4905980 | FALSE | EPSTI1 | NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959 | downstream | downstream | 123050 | NA | NA | NA | 13 | NA |
|
105883 | 103915 | 0.21 | FALSE |
| 64 | chr9 | 96112820 | 96113451 | 632 |
|
35.62526 | 22515.166 | 8988054 | 8988685 | 14 | 5407 | 4901.347 | 1.776297e+04 | 5.929589e+00 | 6.732492e+03 | 1.598101e+00 | 3.746835e+00 | -1.154865e+01 | -1.399660e+00 | -1.344023e+01 | -1.221091e+01 | 0.0192614 | TRUE | 0.4970776 | FALSE | C9orf129 | NM_001098808 NP_001092278 XM_006717117 XP_006717180 | upstream | upstream | 4124 | NA | NA | NA | 5 | NA |
|
28215 | 17555 | 0.23 | FALSE |
| 65 | chr20 | 38902878 | 38903359 | 482 |
|
46.57342 | 22448.390 | 4370570 | 4371051 | 10 | 5561 | 11972.730 | 4.252558e+04 | 1.140145e+01 | 1.732449e+04 | 1.862033e+00 | 3.143154e-01 | -1.186490e+01 | -1.295518e+00 | -1.447916e+01 | -1.704576e+01 | 0.0194949 | TRUE | 0.4970776 | FALSE | MAFB | NM_005461 NP_005452 | downstream | downstream | 414517 | NA | NA | NA | 1 | NA |
|
3359 | 971 | 0.25 | FALSE |
| 66 | chr2 | 217540128 | 217540942 | 815 |
|
26.74077 | 21793.729 | 23441075 | 23441889 | 55 | 6953 | 5998.566 | 6.548098e+01 | 9.984825e+03 | 9.565644e+00 | 1.171249e+04 | 8.220471e+03 | 7.252517e+00 | -2.775142e+00 | 7.482756e+00 | 6.972001e+00 | 0.0202732 | TRUE | 0.4970776 | FALSE | IGFBP5 | NM_000599 NP_000590 | inside exon | inside | 19330 | inside exon | 0 | 4 | 4 | 3'UTR |
|
23444 | 18024 | 0.25 | FALSE |
| 67 | chr5 | 126175555 | 126176211 | 657 |
|
33.10154 | 21747.713 | 11956752 | 11957408 | 23 | 5984 | 4099.549 | 1.630220e+04 | 7.638508e+00 | 4.183302e+03 | 4.794521e-01 | 4.125571e+00 | -1.105949e+01 | -1.962353e+00 | -1.505332e+01 | -1.194819e+01 | 0.0202732 | TRUE | 0.4970776 | FALSE | LMNB1 | NM_001198557 NM_005573 NP_001185486 NP_005564 | downstream | downstream | 63240 | NA | NA | NA | 11 | NA |
|
60397 | 58755 | 0.25 | FALSE |
| 68 | chr2 | 67566474 | 67567099 | 626 |
|
34.05405 | 21317.836 | 7291286 | 7291911 | 17 | 8129 | 4319.711 | 1.942472e+04 | 0.000000e+00 | 2.173832e+03 | 0.000000e+00 | 0.000000e+00 | -1.000000e+100 | -3.159582e+00 | -1.000000e+100 | -1.000000e+100 | 0.0206623 | TRUE | 0.4970776 | FALSE | ETAA1 | NM_019002 NP_061875 XM_005264374 XM_005264375 XM_005264376 XM_005264377 XM_005264378 XP_005264431 XP_005264432 XP_005264433 XP_005264434 XP_005264435 | upstream | upstream | 57343 | NA | NA | NA | 6 | NA |
|
13091 | 12589 | 0.25 | FALSE |
| 69 | chrX | 113706467 | 113706940 | 474 |
|
44.92992 | 21296.784 | 9179412 | 9179885 | 24 | 5710 | 9643.632 | 3.546896e+04 | 2.401899e+00 | 1.274563e+04 | 8.143460e-01 | 3.586498e-01 | -1.385009e+01 | -1.476554e+00 | -1.541056e+01 | -1.659362e+01 | 0.0206623 | TRUE | 0.4970776 | FALSE | HTR2C | NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690 | upstream | upstream | 111611 | NA | NA | NA | 6 | NA |
|
326073 | 180632 | 0.25 | FALSE |
| 70 | chr16 | 3064718 | 3065393 | 676 |
|
31.18130 | 21078.559 | 1323244 | 1323919 | 1 | 3440 | 8697.893 | 1.987659e+04 | 1.292044e+04 | 1.039832e+04 | 1.267012e+00 | 2.928476e+02 | -6.214153e-01 | -9.347202e-01 | -1.393735e+01 | -6.084776e+00 | 0.0208958 | TRUE | 0.4970776 | FALSE | CLDN6 | NM_021195 NP_067018 | inside exon | inside | 2795 | inside exon | 0 | 2 | 2 | overlaps 3'UTR |
|
3475 | 662 | 0.26 | FALSE |
| 71 | chr20 | 12738097 | 12738691 | 595 |
|
34.77718 | 20692.424 | 1449973 | 1450567 | 3 | 8409 | 4168.758 | 1.652513e+04 | 1.582353e+00 | 4.315570e+03 | 0.000000e+00 | 1.512605e+00 | -1.335030e+01 | -1.937039e+00 | -1.000000e+100 | -1.341534e+01 | 0.0215962 | TRUE | 0.5065037 | FALSE | SPTLC3 | NM_018327 NP_060797 XR_244218 | upstream | upstream | 250936 | NA | NA | NA | 2 | NA |
|
41189 | 40087 | 0.27 | FALSE |
| 72 | chr5 | 126179621 | 126180319 | 699 |
|
27.78393 | 19420.967 | 11960818 | 11961516 | 23 | 5984 | 2125.733 | 8.620291e+03 | 0.000000e+00 | 2.008157e+03 | 1.444921e-01 | 7.224610e-02 | -1.000000e+100 | -2.101865e+00 | -1.586446e+01 | -1.686446e+01 | 0.0238531 | TRUE | 0.5228326 | FALSE | LMNB1 | NM_001198557 NM_005573 NP_001185486 NP_005564 | downstream | downstream | 67306 | NA | NA | NA | 11 | NA |
|
60397 | 58755 | 0.29 | FALSE |
| 73 | chr13 | 43442188 | 43442724 | 537 |
|
36.06601 | 19367.447 | 2780540 | 2781076 | 5 | 6717 | 4767.599 | 1.562287e+04 | 6.855680e+00 | 8.206292e+03 | 1.249534e+00 | 7.243948e-01 | -1.115407e+01 | -9.288571e-01 | -1.360998e+01 | -1.439652e+01 | 0.0238531 | TRUE | 0.5228326 | FALSE | EPSTI1 | NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959 | downstream | downstream | 123683 | NA | NA | NA | 13 | NA |
|
105883 | 103915 | 0.29 | FALSE |
| 74 | chr4 | 120917640 | 120918255 | 616 |
|
30.82949 | 18990.969 | 11514360 | 11514975 | 33 | 5835 | 3488.000 | 1.193247e+04 | 3.525162e+00 | 5.498869e+03 | 3.835227e+00 | 1.298701e+00 | -1.172492e+01 | -1.117687e+00 | -1.160329e+01 | -1.316554e+01 | 0.0240087 | TRUE | 0.5228326 | FALSE | MAD2L1 | NM_002358 NP_002349 | downstream | downstream | 69758 | NA | NA | NA | 5 | NA |
|
7434 | 6616 | 0.29 | FALSE |
| 75 | chr13 | 43444584 | 43445085 | 502 |
|
37.33831 | 18743.832 | 2782773 | 2783274 | 5 | 6717 | 5829.651 | 1.898859e+04 | 6.219124e+00 | 1.015318e+04 | 1.005976e-01 | 1.593625e-01 | -1.157613e+01 | -9.032012e-01 | -1.752618e+01 | -1.686246e+01 | 0.0243200 | TRUE | 0.5228326 | FALSE | EPSTI1 | NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959 | downstream | downstream | 121322 | NA | NA | NA | 13 | NA |
|
105883 | 103915 | 0.29 | FALSE |
| 76 | chr9 | 96113643 | 96114208 | 566 |
|
32.46175 | 18373.352 | 8988877 | 8989442 | 14 | 5407 | 3135.107 | 1.151133e+04 | 9.814488e-01 | 4.163220e+03 | 0.000000e+00 | 0.000000e+00 | -1.351778e+01 | -1.467283e+00 | -1.000000e+100 | -1.000000e+100 | 0.0250983 | TRUE | 0.5228326 | FALSE | C9orf129 | NM_001098808 NP_001092278 XM_006717117 XP_006717180 | upstream | upstream | 4947 | NA | NA | NA | 5 | NA |
|
28215 | 17555 | 0.29 | FALSE |
| 77 | chr13 | 51748975 | 51749463 | 489 |
|
36.97313 | 18079.863 | 3859810 | 3860298 | 6 | 5837 | 5363.331 | 1.391253e+04 | 1.018200e+01 | 1.289363e+04 | 3.098160e-01 | 0.000000e+00 | -1.041615e+01 | -1.097261e-01 | -1.545461e+01 | -1.000000e+100 | 0.0254874 | TRUE | 0.5228326 | FALSE | LINC00371 | NR_102431 NR_102432 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.29 | FALSE |
| 78 | chr10 | 53794449 | 53795035 | 587 |
|
30.71760 | 18031.230 | 5492069 | 5492655 | 7 | 5594 | 2766.999 | 9.687255e+03 | 2.302385e+00 | 4.145267e+03 | 0.000000e+00 | 1.720613e-01 | -1.203874e+01 | -1.224623e+00 | -1.000000e+100 | -1.578088e+01 | 0.0254874 | TRUE | 0.5228326 | FALSE | PRKG1 | NM_001098512 NM_006258 NP_001091982 NP_006249 XM_005269970 XM_005269971 XM_005269972 XP_005270027 XP_005270028 XP_005270029 | inside intron | inside | 960215 | inside intron | 19209 | 6 | 18 | inside transcription region |
|
1223876 | 1219309 | 0.29 | FALSE |
| 79 | chr1 | 26753216 | 26753888 | 673 |
|
26.62943 | 17921.605 | 4959068 | 4959740 | 5 | 4338 | 11278.685 | 1.287923e+04 | 1.058828e+03 | 1.656111e+04 | 0.000000e+00 | 2.589425e+04 | -3.604506e+00 | 3.627527e-01 | -1.000000e+100 | 1.007585e+00 | 0.0258765 | TRUE | 0.5228326 | FALSE | LIN28A | NM_024674 NP_078950 XM_006710899 XM_006710900 XP_006710962 XP_006710963 | inside exon | inside | 15947 | inside exon | 0 | 4 | 4 | 3'UTR |
|
18950 | 15566 | 0.30 | FALSE |
| 80 | chr13 | 56153882 | 56154307 | 426 |
|
40.54547 | 17272.368 | 4512640 | 4513065 | 12 | 5555 | 7090.373 | 2.754669e+04 | 7.823944e+00 | 7.896170e+03 | 1.185446e-01 | 1.066901e+00 | -1.178170e+01 | -1.802654e+00 | -1.782609e+01 | -1.465616e+01 | 0.0268882 | TRUE | 0.5228326 | FALSE | MIR5007 | NR_049804 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.31 | FALSE |
| 81 | chrX | 113836574 | 113837059 | 486 |
|
35.39590 | 17202.405 | 9203672 | 9204157 | 25 | 4367 | 4272.884 | 1.473874e+04 | 2.287037e+00 | 6.621034e+03 | 7.818930e-02 | 2.279835e+00 | -1.265385e+01 | -1.154485e+00 | -1.752421e+01 | -1.265840e+01 | 0.0271995 | TRUE | 0.5228326 | FALSE | HTR2C | NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690 | inside intron | inside | 18023 | inside intron | 11214 | 2 | 7 | 5' UTR |
|
326073 | 180632 | 0.32 | FALSE |
| 82 | chr13 | 51746745 | 51747159 | 415 |
|
41.27155 | 17127.694 | 3857580 | 3857994 | 6 | 5837 | 8118.227 | 2.179070e+04 | 8.028916e+00 | 1.878299e+04 | 7.355422e+00 | 2.068675e+00 | -1.140622e+01 | -2.142857e-01 | -1.153262e+01 | -1.336272e+01 | 0.0272773 | TRUE | 0.5228326 | FALSE | LINC00371 | NR_102431 NR_102432 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.32 | FALSE |
| 83 | chr9 | 99979785 | 99980304 | 520 |
|
32.72675 | 17017.910 | 9817553 | 9818072 | 16 | 5375 | 3525.356 | 1.270449e+04 | 5.606731e+00 | 4.911163e+03 | 3.536538e+00 | 1.985577e+00 | -1.114589e+01 | -1.371202e+00 | -1.181071e+01 | -1.264349e+01 | 0.0273552 | TRUE | 0.5228326 | FALSE | LOC100499484 | NR_036526 | NA | NA | 0 | NA | NA | NA | 16 | NA |
|
0 | 0 | 0.32 | FALSE |
| 84 | chr16 | 3065436 | 3066043 | 608 |
|
27.58377 | 16770.934 | 1323962 | 1324569 | 1 | 3440 | 5275.413 | 1.258239e+04 | 7.601294e+03 | 6.011984e+03 | 9.934211e-01 | 1.803997e+02 | -7.270896e-01 | -1.065494e+00 | -1.362864e+01 | -6.124066e+00 | 0.0283669 | TRUE | 0.5228326 | FALSE | CLDN6 | NM_021195 NP_067018 | inside exon | inside | 2145 | inside exon | 0 | 2 | 2 | overlaps 5' UTR |
|
3475 | 662 | 0.32 | FALSE |
| 85 | chr9 | 99980938 | 99981519 | 582 |
|
28.69672 | 16701.494 | 9818706 | 9819287 | 16 | 5375 | 2530.087 | 9.586055e+03 | 5.504295e+00 | 3.056032e+03 | 0.000000e+00 | 2.846220e+00 | -1.076616e+01 | -1.649278e+00 | -1.000000e+100 | -1.171767e+01 | 0.0284447 | TRUE | 0.5228326 | FALSE | LOC100499484 | NR_036526 | NA | NA | 0 | NA | NA | NA | 16 | NA |
|
0 | 0 | 0.32 | FALSE |
| 86 | chr11 | 2016404 | 2017024 | 621 |
|
26.45597 | 16429.160 | 638587 | 639207 | 1 | 1841 | 30779.267 | 6.327858e+01 | 1.359313e+05 | 2.803704e+01 | 1.767472e+04 | 1.990354e+02 | 1.106887e+01 | -1.174383e+00 | 8.125755e+00 | 1.653236e+00 | 0.0288338 | TRUE | 0.5228326 | FALSE | H19 | NR_002196 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.32 | FALSE |
| 87 | chr9 | 90030709 | 90031165 | 457 |
|
35.73261 | 16329.804 | 8216426 | 8216882 | 12 | 5446 | 5090.214 | 1.625399e+04 | 1.824726e+01 | 9.177902e+03 | 5.273523e-01 | 4.059081e-01 | -9.798898e+00 | -8.245576e-01 | -1.491167e+01 | -1.528928e+01 | 0.0290673 | TRUE | 0.5228326 | FALSE | DAPK1 | NM_001288729 NM_001288730 NM_001288731 NM_004938 NP_001275658 NP_001275659 NP_001275660 NP_004929 XM_005251757 XM_006716988 XP_005251814 XP_006717051 | upstream | upstream | 81493 | NA | NA | NA | 26 | NA |
|
210891 | 208286 | 0.32 | FALSE |
| 88 | chr20 | 38898062 | 38898550 | 489 |
|
32.35083 | 15819.555 | 4365754 | 4366242 | 10 | 5561 | 3710.479 | 1.311042e+04 | 7.229039e-01 | 5.427930e+03 | 0.000000e+00 | 1.332209e+01 | -1.414655e+01 | -1.272240e+00 | -1.000000e+100 | -9.942678e+00 | 0.0313242 | TRUE | 0.5228326 | FALSE | MAFB | NM_005461 NP_005452 | downstream | downstream | 419326 | NA | NA | NA | 1 | NA |
|
3359 | 971 | 0.32 | FALSE |
| 89 | chr11 | 96461598 | 96462056 | 459 |
|
34.42289 | 15800.107 | 12948890 | 12949348 | 22 | 2483 | 4982.913 | 1.426658e+04 | 1.058279e+01 | 1.063238e+04 | 6.318083e-01 | 4.382353e+00 | -1.039670e+01 | -4.241748e-01 | -1.446279e+01 | -1.166865e+01 | 0.0313242 | TRUE | 0.5228326 | FALSE | JRKL-AS1 | NR_047481 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.32 | FALSE |
| 90 | chr10 | 53795521 | 53795971 | 451 |
|
35.01622 | 15792.315 | 5493141 | 5493591 | 7 | 5594 | 4281.393 | 1.601845e+04 | 2.817073e+00 | 5.384358e+03 | 0.000000e+00 | 1.343681e+00 | -1.247325e+01 | -1.572888e+00 | -1.000000e+100 | -1.354126e+01 | 0.0313242 | TRUE | 0.5228326 | FALSE | PRKG1 | NM_001098512 NM_006258 NP_001091982 NP_006249 XM_005269970 XM_005269971 XM_005269972 XP_005270027 XP_005270028 XP_005270029 | inside intron | inside | 961287 | inside intron | 18273 | 6 | 18 | inside transcription region |
|
1223876 | 1219309 | 0.32 | FALSE |
| 91 | chr12 | 14861975 | 14862472 | 498 |
|
31.53517 | 15704.516 | 2904997 | 2905494 | 11 | 5086 | 2972.004 | 9.096644e+03 | 8.112450e-01 | 5.760839e+03 | 0.000000e+00 | 1.723896e+00 | -1.345291e+01 | -6.590553e-01 | -1.000000e+100 | -1.236545e+01 | 0.0315576 | TRUE | 0.5228326 | FALSE | GUCY2C | NM_004963 NP_004954 | upstream | upstream | 12456 | NA | NA | NA | 27 | NA |
|
83951 | 83331 | 0.32 | FALSE |
| 92 | chr9 | 96115163 | 96115582 | 420 |
|
37.29741 | 15664.912 | 8990397 | 8990816 | 14 | 5407 | 5181.100 | 1.607174e+04 | 1.724524e+01 | 9.815190e+03 | 7.940476e-01 | 5.297619e-01 | -9.864112e+00 | -7.114381e-01 | -1.430494e+01 | -1.488882e+01 | 0.0315576 | TRUE | 0.5228326 | FALSE | C9orf129 | NM_001098808 NP_001092278 XM_006717117 XP_006717180 | upstream | upstream | 6467 | NA | NA | NA | 5 | NA |
|
28215 | 17555 | 0.32 | FALSE |
| 93 | chr4 | 88845652 | 88846211 | 560 |
|
27.48896 | 15393.817 | 8280193 | 8280752 | 18 | 5462 | 2869.611 | 1.059714e+04 | 1.968125e+01 | 3.707593e+03 | 2.345536e+01 | 1.803571e-01 | -9.072638e+00 | -1.515121e+00 | -8.819542e+00 | -1.584246e+01 | 0.0320246 | TRUE | 0.5228326 | FALSE | SPP1 | NM_000582 NM_001040058 NM_001040060 NM_001251829 NM_001251830 NP_000573 NP_001035147 NP_001035149 NP_001238758 NP_001238759 | upstream | upstream | 50591 | NA | NA | NA | 7 | NA |
|
7761 | 6000 | 0.32 | FALSE |
| 94 | chr4 | 88847895 | 88848389 | 495 |
|
30.99509 | 15342.567 | 8282436 | 8282930 | 18 | 5462 | 3052.250 | 9.491968e+03 | 2.034848e+01 | 5.748856e+03 | 7.676770e-02 | 0.000000e+00 | -8.865642e+00 | -7.234324e-01 | -1.691585e+01 | -1.000000e+100 | 0.0321802 | TRUE | 0.5228326 | FALSE | SPP1 | NM_000582 NM_001040058 NM_001040060 NM_001251829 NM_001251830 NP_000573 NP_001035147 NP_001035149 NP_001238758 NP_001238759 | upstream | upstream | 48413 | NA | NA | NA | 7 | NA |
|
7761 | 6000 | 0.32 | FALSE |
| 95 | chr5 | 120033292 | 120033743 | 452 |
|
33.75582 | 15257.631 | 11488498 | 11488949 | 19 | 4521 | 4051.761 | 1.306790e+04 | 1.323562e+01 | 7.177277e+03 | 1.681416e-01 | 2.234513e-01 | -9.947386e+00 | -8.645188e-01 | -1.624599e+01 | -1.583571e+01 | 0.0323359 | TRUE | 0.5228326 | FALSE | PRR16 | NM_016644 NP_057728 XM_005272010 XM_005272011 XM_005272012 XP_005272067 XP_005272068 XP_005272069 | downstream | downstream | 233273 | NA | NA | NA | 3 | NA |
|
222945 | 205505 | 0.32 | FALSE |
| 96 | chr4 | 88844632 | 88845102 | 471 |
|
32.38390 | 15252.817 | 8279173 | 8279643 | 18 | 5462 | 3562.843 | 1.235567e+04 | 2.519639e+01 | 5.432314e+03 | 0.000000e+00 | 1.031847e+00 | -8.937741e+00 | -1.185534e+00 | -1.000000e+100 | -1.354766e+01 | 0.0323359 | TRUE | 0.5228326 | FALSE | SPP1 | NM_000582 NM_001040058 NM_001040060 NM_001251829 NM_001251830 NP_000573 NP_001035147 NP_001035149 NP_001238758 NP_001238759 | upstream | upstream | 51700 | NA | NA | NA | 7 | NA |
|
7761 | 6000 | 0.32 | FALSE |
| 97 | chr6 | 95264149 | 95264625 | 477 |
|
31.32779 | 14943.354 | 10591832 | 10592308 | 19 | 4107 | 4400.684 | 1.338332e+04 | 2.282075e+01 | 8.580763e+03 | 7.199161e+00 | 9.316562e+00 | -9.195874e+00 | -6.412582e-01 | -1.086032e+01 | -1.048835e+01 | 0.0327250 | TRUE | 0.5228326 | FALSE | MANEA | NM_024641 NP_078917 XM_005267147 XP_005267204 | upstream | upstream | 760748 | NA | NA | NA | 2 | NA |
|
9881 | 596 | 0.32 | FALSE |
| 98 | chr9 | 99981864 | 99982252 | 389 |
|
38.37747 | 14928.835 | 9819632 | 9820020 | 16 | 5375 | 5420.202 | 1.968798e+04 | 1.151671e+00 | 7.411486e+03 | 1.298201e-01 | 2.596401e-01 | -1.406130e+01 | -1.409480e+00 | -1.721044e+01 | -1.621044e+01 | 0.0328028 | TRUE | 0.5228326 | FALSE | LOC100499484 | NR_036526 | NA | NA | 0 | NA | NA | NA | 16 | NA |
|
0 | 0 | 0.32 | FALSE |
| 99 | chr2 | 67563792 | 67564338 | 547 |
|
26.96341 | 14748.988 | 7288604 | 7289150 | 17 | 8129 | 2273.538 | 1.045125e+04 | 3.692870e+00 | 9.119113e+02 | 9.141000e-04 | 8.308958e-01 | -1.146665e+01 | -3.518639e+00 | -2.344679e+01 | -1.361865e+01 | 0.0330363 | TRUE | 0.5228326 | FALSE | ETAA1 | NM_019002 NP_061875 XM_005264374 XM_005264375 XM_005264376 XM_005264377 XM_005264378 XP_005264431 XP_005264432 XP_005264433 XP_005264434 XP_005264435 | upstream | upstream | 60104 | NA | NA | NA | 6 | NA |
|
13091 | 12589 | 0.33 | FALSE |
| 100 | chr1 | 26755712 | 26756212 | 501 |
|
29.08615 | 14572.160 | 4961564 | 4962064 | 5 | 4338 | 15135.704 | 1.787545e+04 | 1.423259e+03 | 2.377972e+04 | 0.000000e+00 | 3.260009e+04 | -3.650709e+00 | 4.117520e-01 | -1.000000e+100 | 8.668966e-01 | 0.0333476 | TRUE | 0.5228326 | FALSE | LIN28A | NM_024674 NP_078950 XM_006710899 XM_006710900 XP_006710962 XP_006710963 | inside exon | inside | 18443 | inside exon | 0 | 4 | 4 | 3'UTR |
|
18950 | 15566 | 0.33 | FALSE |
| 101 | chr8 | 115308068 | 115308479 | 412 |
|
35.25251 | 14524.034 | 10978075 | 10978486 | 27 | 1886 | 4427.031 | 1.792430e+04 | 1.225728e-01 | 4.210734e+03 | 0.000000e+00 | 0.000000e+00 | -1.715792e+01 | -2.089773e+00 | -1.000000e+100 | -1.000000e+100 | 0.0334254 | TRUE | 0.5228326 | FALSE | CSMD3 | NM_052900 NM_198123 NM_198124 NP_443132 NP_937756 NP_937757 | upstream | upstream | 858826 | NA | NA | NA | 71 | NA |
|
1214083 | 1212083 | 0.33 | FALSE |
| 102 | chr8 | 115297057 | 115297479 | 423 |
|
33.83561 | 14312.465 | 10967064 | 10967486 | 26 | 5529 | 4545.169 | 1.357679e+04 | 1.791371e+01 | 9.124734e+03 | 3.342790e+00 | 3.062648e+00 | -9.565863e+00 | -5.732882e-01 | -1.198780e+01 | -1.211408e+01 | 0.0338145 | TRUE | 0.5228326 | FALSE | CSMD3 | NM_052900 NM_198123 NM_198124 NP_443132 NP_937756 NP_937757 | upstream | upstream | 847815 | NA | NA | NA | 71 | NA |
|
1214083 | 1212083 | 0.33 | FALSE |
| 103 | chr9 | 76703336 | 76703764 | 429 |
|
33.26880 | 14272.317 | 7024316 | 7024744 | 5 | 5530 | 3614.107 | 1.252153e+04 | 2.075758e+00 | 5.543555e+03 | 2.867133e+00 | 5.023310e-01 | -1.255849e+01 | -1.175528e+00 | -1.209251e+01 | -1.460541e+01 | 0.0338924 | TRUE | 0.5228326 | FALSE | RORB | NM_006914 NP_008845 | upstream | upstream | 408488 | NA | NA | NA | 10 | NA |
|
189865 | 187641 | 0.33 | FALSE |
| 104 | chr1 | 26754506 | 26754983 | 478 |
|
29.77623 | 14233.036 | 4960358 | 4960835 | 5 | 4338 | 16599.265 | 1.956677e+04 | 1.609012e+03 | 2.415231e+04 | 0.000000e+00 | 3.766823e+04 | -3.604159e+00 | 3.037554e-01 | -1.000000e+100 | 9.449424e-01 | 0.0340480 | TRUE | 0.5228326 | FALSE | LIN28A | NM_024674 NP_078950 XM_006710899 XM_006710900 XP_006710962 XP_006710963 | inside exon | inside | 17237 | inside exon | 0 | 4 | 4 | 3'UTR |
|
18950 | 15566 | 0.33 | FALSE |
| 105 | chr2 | 217559593 | 217560093 | 501 |
|
28.29420 | 14175.393 | 23460265 | 23460765 | 56 | 1039 | 7990.144 | 1.051846e+02 | 1.095417e+04 | 7.575848e+00 | 1.717863e+04 | 1.170516e+04 | 6.702412e+00 | -3.795373e+00 | 7.351547e+00 | 6.798077e+00 | 0.0341258 | TRUE | 0.5228326 | FALSE | IGFBP5 | NM_000599 NP_000590 | inside exon | inside | 179 | inside exon | 0 | 1 | 4 | 5' UTR |
|
23444 | 18024 | 0.33 | FALSE |
| 106 | chr6 | 95266021 | 95266426 | 406 |
|
33.03470 | 13412.086 | 10593704 | 10594109 | 19 | 4107 | 3885.321 | 1.351524e+04 | 7.044335e+00 | 5.898990e+03 | 2.487685e-01 | 5.084975e+00 | -1.090584e+01 | -1.196047e+00 | -1.572942e+01 | -1.137606e+01 | 0.0359158 | TRUE | 0.5228326 | FALSE | MANEA | NM_024641 NP_078917 XM_005267147 XP_005267204 | upstream | upstream | 758947 | NA | NA | NA | 2 | NA |
|
9881 | 596 | 0.33 | FALSE |
| 107 | chr8 | 120118039 | 120118556 | 518 |
|
25.63179 | 13277.267 | 11210801 | 11211318 | 32 | 10012 | 1719.041 | 3.851351e-01 | 9.749030e-02 | 8.108108e-01 | 8.593599e+03 | 3.137066e-01 | -1.982034e+00 | 1.074001e+00 | 1.444561e+01 | -2.959490e-01 | 0.0361493 | TRUE | 0.5228326 | FALSE | COLEC10 | NM_006438 NP_006429 XM_005250756 XP_005250813 | inside exon | inside | 38615 | inside exon | 0 | 6 | 6 | overlaps 3'UTR |
|
39778 | 38909 | 0.33 | FALSE |
| 108 | chr11 | 94390137 | 94390621 | 485 |
|
27.37572 | 13277.225 | 12613174 | 12613658 | 19 | 6962 | 2158.864 | 4.324822e+03 | 1.988660e+00 | 6.465221e+03 | 2.287629e+00 | 0.000000e+00 | -1.108663e+01 | 5.800590e-01 | -1.088457e+01 | -1.000000e+100 | 0.0361493 | TRUE | 0.5228326 | FALSE | PIWIL4 | NM_152431 NP_689644 | NA | NA | 0 | NA | NA | NA | 19 | NA |
|
0 | 0 | 0.33 | FALSE |
| 109 | chr5 | 75656223 | 75656603 | 381 |
|
34.70456 | 13222.437 | 7390193 | 7390573 | 9 | 2435 | 4790.536 | 1.707749e+04 | 1.609055e+01 | 6.849895e+03 | 3.321522e+00 | 5.884514e+00 | -1.005167e+01 | -1.317942e+00 | -1.232796e+01 | -1.150288e+01 | 0.0363827 | TRUE | 0.5228326 | FALSE | SV2C | NM_014979 NP_055794 XM_005248470 XP_005248527 | downstream | downstream | 276918 | NA | NA | NA | 13 | NA |
|
242111 | 193796 | 0.33 | FALSE |
| 110 | chr20 | 12738794 | 12739189 | 396 |
|
32.92935 | 13040.021 | 1450670 | 1451065 | 3 | 8409 | 3498.707 | 1.346230e+04 | 4.891414e+00 | 4.025984e+03 | 1.085859e-01 | 2.550505e-01 | -1.142639e+01 | -1.741512e+00 | -1.691973e+01 | -1.568778e+01 | 0.0365384 | TRUE | 0.5228326 | FALSE | SPTLC3 | NM_018327 NP_060797 XR_244218 | upstream | upstream | 250438 | NA | NA | NA | 2 | NA |
|
41189 | 40087 | 0.33 | FALSE |
| 111 | chr6 | 31137993 | 31138374 | 382 |
|
34.10470 | 13027.994 | 3905381 | 3905762 | 10 | 382 | 4458.500 | 9.074832e+03 | 1.206021e+01 | 1.320199e+04 | 0.000000e+00 | 3.616492e+00 | -9.555472e+00 | 5.408124e-01 | -1.000000e+100 | -1.129306e+01 | 0.0366940 | TRUE | 0.5228326 | FALSE | POU5F1 | NM_001173531 NM_001285986 NM_001285987 NM_002701 NM_203289 NP_001167002 NP_001272915 NP_001272916 NP_002692 NP_976034 | inside exon | inside | 77 | inside exon | 0 | 1 | 5 | inside transcription region |
|
6337 | 6019 | 0.33 | FALSE |
| 112 | chr2 | 189873650 | 189873947 | 298 |
|
43.23194 | 12883.117 | 20139715 | 20140012 | 41 | 27987 | 19167.536 | 6.124161e-01 | 1.521884e+04 | 6.879195e-01 | 8.061664e+04 | 9.077181e-01 | 1.460099e+01 | 1.677274e-01 | 1.700621e+01 | 5.677321e-01 | 0.0370832 | TRUE | 0.5228326 | FALSE | COL3A1 | NM_000090 NP_000081 | inside exon | inside | 34551 | inside exon | 0 | 48 | 51 | inside transcription region |
|
38373 | 37284 | 0.33 | FALSE |
| 113 | chr9 | 96114293 | 96114687 | 395 |
|
32.46915 | 12825.315 | 8989527 | 8989921 | 14 | 5407 | 3320.672 | 1.211646e+04 | 2.548101e+00 | 4.483900e+03 | 3.835443e-01 | 6.455700e-02 | -1.221526e+01 | -1.434143e+00 | -1.494722e+01 | -1.751796e+01 | 0.0373945 | TRUE | 0.5228326 | FALSE | C9orf129 | NM_001098808 NP_001092278 XM_006717117 XP_006717180 | upstream | upstream | 5597 | NA | NA | NA | 5 | NA |
|
28215 | 17555 | 0.33 | FALSE |
| 114 | chr16 | 13448534 | 13448926 | 393 |
|
32.58147 | 12804.517 | 2742858 | 2743250 | 5 | 5109 | 3461.378 | 1.268077e+04 | 1.653181e+01 | 4.609341e+03 | 1.170483e-01 | 1.284987e-01 | -9.583182e+00 | -1.460010e+00 | -1.672518e+01 | -1.659053e+01 | 0.0375501 | TRUE | 0.5228326 | FALSE | SHISA9 | NM_001145204 NM_001145205 NP_001138676 NP_001138677 XM_005255539 XP_005255596 | downstream | downstream | 453057 | NA | NA | NA | 5 | NA |
|
338796 | 333344 | 0.33 | FALSE |
| 115 | chr6 | 115358107 | 115358429 | 323 |
|
38.59639 | 12466.636 | 12490798 | 12491120 | 24 | 2818 | 8055.180 | 2.564254e+04 | 3.335449e+01 | 1.457874e+04 | 1.063158e+01 | 1.063158e+01 | -9.586443e+00 | -8.146732e-01 | -1.123597e+01 | -1.123597e+01 | 0.0389509 | TRUE | 0.5228326 | FALSE | HS3ST5 | NM_153612 NP_705840 XM_006715379 XP_006715442 | upstream | upstream | 694567 | NA | NA | NA | 5 | NA |
|
286790 | 5588 | 0.33 | FALSE |
| 116 | chr5 | 92919338 | 92919757 | 420 |
|
29.48181 | 12382.361 | 9118758 | 9119177 | 12 | 4724 | 1970.104 | 0.000000e+00 | 6.892857e-01 | 3.404762e-01 | 7.240733e+03 | 2.608758e+03 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 0.0393401 | TRUE | 0.5228326 | FALSE | NR2F1 | NM_005654 NP_005645 | inside exon | inside | 295 | inside exon | 0 | 1 | 3 | 5' UTR |
|
10743 | 8818 | 0.33 | FALSE |
| 117 | chr14 | 38663051 | 38663423 | 373 |
|
33.16679 | 12371.214 | 2169938 | 2170310 | 3 | 5592 | 4154.092 | 1.501784e+04 | 9.276139e+00 | 5.733349e+03 | 2.081769e+00 | 7.916890e+00 | -1.066086e+01 | -1.389227e+00 | -1.281658e+01 | -1.088946e+01 | 0.0393401 | TRUE | 0.5228326 | FALSE | SSTR1 | NM_001049 NP_001040 | upstream | upstream | 13781 | NA | NA | NA | 3 | NA |
|
5064 | 1175 | 0.33 | FALSE |
| 118 | chr12 | 59720606 | 59720948 | 343 |
|
35.81625 | 12284.974 | 8415189 | 8415531 | 15 | 5621 | 4679.413 | 1.560075e+04 | 3.083090e+00 | 7.777882e+03 | 8.746360e-02 | 1.526093e+01 | -1.230495e+01 | -1.004166e+00 | -1.744450e+01 | -9.997556e+00 | 0.0398848 | TRUE | 0.5228326 | FALSE | SLC16A7 | NM_001270622 NM_001270623 NM_004731 NP_001257551 NP_001257552 NP_004722 NR_073055 NR_073056 XM_005269231 XM_006719693 XP_005269288 XP_006719756 | upstream | upstream | 268873 | NA | NA | NA | 6 | NA |
|
193814 | 74877 | 0.33 | FALSE |
| 119 | chr4 | 88858004 | 88858439 | 436 |
|
27.67109 | 12064.593 | 8292484 | 8292919 | 19 | 5968 | 2221.359 | 8.119538e+03 | 9.517202e+00 | 2.976435e+03 | 5.332569e-01 | 7.729358e-01 | -9.736644e+00 | -1.447812e+00 | -1.389428e+01 | -1.335876e+01 | 0.0408965 | TRUE | 0.5228326 | FALSE | SPP1 | NM_000582 NM_001040058 NM_001040060 NM_001251829 NM_001251830 NP_000573 NP_001035147 NP_001035149 NP_001238758 NP_001238759 | upstream | upstream | 38363 | NA | NA | NA | 7 | NA |
|
7761 | 6000 | 0.33 | FALSE |
| 120 | chr12 | 79939060 | 79939363 | 304 |
|
39.19671 | 11915.798 | 10243033 | 10243336 | 22 | 5631 | 6113.919 | 1.956355e+04 | 8.866776e+00 | 1.099502e+04 | 4.983553e-01 | 1.661184e+00 | -1.110747e+01 | -8.313179e-01 | -1.526063e+01 | -1.352367e+01 | 0.0412857 | TRUE | 0.5228326 | FALSE | PAWR | NM_002583 NP_002574 XM_006719435 XM_006719436 XP_006719498 XP_006719499 | downstream | downstream | 145427 | NA | NA | NA | 7 | NA |
|
99045 | 97637 | 0.33 | FALSE |
| 121 | chr1 | 185919814 | 185920163 | 350 |
|
33.95527 | 11884.343 | 25066963 | 25067312 | 32 | 5595 | 4135.115 | 1.407415e+04 | 1.247143e+01 | 6.586234e+03 | 0.000000e+00 | 2.721429e+00 | -1.014021e+01 | -1.095522e+00 | -1.000000e+100 | -1.233640e+01 | 0.0414413 | TRUE | 0.5228326 | FALSE | HMCN1 | NM_031935 NP_114141 | inside intron | inside | 216131 | inside intron | 11487 | 12 | 107 | inside transcription region |
|
456402 | 455098 | 0.33 | FALSE |
| 122 | chrX | 86940474 | 86940885 | 412 |
|
28.79489 | 11863.496 | 6794748 | 6795159 | 11 | 4336 | 2468.723 | 8.041492e+03 | 2.278641e+01 | 4.278993e+03 | 7.524270e-02 | 2.669903e-01 | -8.463146e+00 | -9.101919e-01 | -1.670555e+01 | -1.487839e+01 | 0.0415191 | TRUE | 0.5228326 | FALSE | KLHL4 | NM_019117 NM_057162 NP_061990 NP_476503 | downstream | downstream | 167759 | NA | NA | NA | 11 | NA |
|
152335 | 148637 | 0.33 | FALSE |
| 123 | chr2 | 189875374 | 189875616 | 243 |
|
48.31063 | 11739.484 | 20141439 | 20141681 | 41 | 27987 | 30593.053 | 2.991770e+00 | 2.481816e+04 | 3.456790e-01 | 1.281426e+05 | 1.164609e+00 | 1.301811e+01 | -3.113494e+00 | 1.538639e+01 | -1.361153e+00 | 0.0419861 | TRUE | 0.5228326 | FALSE | COL3A1 | NM_000090 NP_000081 | inside exon | inside | 36275 | inside exon | 0 | 50 | 51 | inside transcription region |
|
38373 | 37284 | 0.33 | FALSE |
| 124 | chr2 | 67561534 | 67561921 | 388 |
|
30.22362 | 11726.764 | 7286346 | 7286733 | 17 | 8129 | 3213.077 | 1.480877e+04 | 3.123711e+00 | 1.252853e+03 | 2.590206e-01 | 3.827320e-01 | -1.221090e+01 | -3.563162e+00 | -1.580303e+01 | -1.523976e+01 | 0.0420639 | TRUE | 0.5228326 | FALSE | ETAA1 | NM_019002 NP_061875 XM_005264374 XM_005264375 XM_005264376 XM_005264377 XM_005264378 XP_005264431 XP_005264432 XP_005264433 XP_005264434 XP_005264435 | upstream | upstream | 62521 | NA | NA | NA | 6 | NA |
|
13091 | 12589 | 0.33 | FALSE |
| 125 | chr10 | 53795111 | 53795481 | 371 |
|
31.60442 | 11725.239 | 5492731 | 5493101 | 7 | 5594 | 3039.199 | 1.126393e+04 | 0.000000e+00 | 3.932066e+03 | 0.000000e+00 | 0.000000e+00 | -1.000000e+100 | -1.518350e+00 | -1.000000e+100 | -1.000000e+100 | 0.0420639 | TRUE | 0.5228326 | FALSE | PRKG1 | NM_001098512 NM_006258 NP_001091982 NP_006249 XM_005269970 XM_005269971 XM_005269972 XP_005270027 XP_005270028 XP_005270029 | inside intron | inside | 960877 | inside intron | 18763 | 6 | 18 | inside transcription region |
|
1223876 | 1219309 | 0.33 | FALSE |
| 126 | chr9 | 76701619 | 76701963 | 345 |
|
33.42157 | 11530.442 | 7022599 | 7022943 | 5 | 5530 | 4009.857 | 1.256670e+04 | 3.476812e+00 | 7.477796e+03 | 0.000000e+00 | 1.317391e+00 | -1.181955e+01 | -7.489204e-01 | -1.000000e+100 | -1.321963e+01 | 0.0435426 | TRUE | 0.5228326 | FALSE | RORB | NM_006914 NP_008845 | upstream | upstream | 410289 | NA | NA | NA | 10 | NA |
|
189865 | 187641 | 0.33 | FALSE |
| 127 | chr6 | 132225441 | 132225809 | 369 |
|
31.23908 | 11527.221 | 13972844 | 13973212 | 41 | 4872 | 3548.744 | 1.126588e+04 | 2.048238e+01 | 6.451726e+03 | 7.601626e-01 | 4.872629e+00 | -9.103360e+00 | -8.042024e-01 | -1.385529e+01 | -1.117497e+01 | 0.0435426 | TRUE | 0.5228326 | FALSE | ENPP1 | NM_006208 NP_006199 XM_005267017 XP_005267074 | downstream | downstream | 96285 | NA | NA | NA | 25 | NA |
|
87139 | 82475 | 0.33 | FALSE |
| 128 | chr10 | 53794160 | 53794411 | 252 |
|
45.45602 | 11454.916 | 5491780 | 5492031 | 7 | 5594 | 10469.738 | 3.734098e+04 | 5.376984e+00 | 1.499961e+04 | 5.615079e-01 | 2.162698e+00 | -1.276167e+01 | -1.315835e+00 | -1.602109e+01 | -1.407564e+01 | 0.0440095 | TRUE | 0.5228326 | FALSE | PRKG1 | NM_001098512 NM_006258 NP_001091982 NP_006249 XM_005269970 XM_005269971 XM_005269972 XP_005270027 XP_005270028 XP_005270029 | inside intron | inside | 959926 | inside intron | 19833 | 6 | 18 | inside transcription region |
|
1223876 | 1219309 | 0.33 | FALSE |
| 129 | chr16 | 13450360 | 13450741 | 382 |
|
29.95802 | 11443.963 | 2744684 | 2745065 | 5 | 5109 | 2590.868 | 8.853296e+03 | 1.321990e-01 | 4.100724e+03 | 1.321990e-01 | 5.759160e-02 | -1.603122e+01 | -1.110336e+00 | -1.603122e+01 | -1.723000e+01 | 0.0440095 | TRUE | 0.5228326 | FALSE | SHISA9 | NM_001145204 NM_001145205 NP_001138676 NP_001138677 XM_005255539 XP_005255596 | downstream | downstream | 454883 | NA | NA | NA | 5 | NA |
|
338796 | 333344 | 0.33 | FALSE |
| 130 | chr4 | 88845216 | 88845546 | 331 |
|
34.55218 | 11436.771 | 8279757 | 8280087 | 18 | 5462 | 4620.713 | 1.443148e+04 | 5.934139e+01 | 8.611116e+03 | 7.024169e-01 | 9.184290e-01 | -7.925965e+00 | -7.449476e-01 | -1.432653e+01 | -1.393969e+01 | 0.0440095 | TRUE | 0.5228326 | FALSE | SPP1 | NM_000582 NM_001040058 NM_001040060 NM_001251829 NM_001251830 NP_000573 NP_001035147 NP_001035149 NP_001238758 NP_001238759 | upstream | upstream | 51256 | NA | NA | NA | 7 | NA |
|
7761 | 6000 | 0.33 | FALSE |
| 131 | chr15 | 35082428 | 35082756 | 329 |
|
34.75101 | 11433.082 | 1974583 | 1974911 | 1 | 5287 | 24686.754 | 5.816717e+02 | 1.141394e+05 | 8.046252e+03 | 3.103343e+00 | 6.633040e+02 | 7.616377e+00 | 3.790040e+00 | -7.550238e+00 | 1.894649e-01 | 0.0440095 | TRUE | 0.5228326 | FALSE | ACTC1 | NM_005159 NP_005150 | inside exon | inside | 5171 | inside exon | 0 | 7 | 7 | overlaps 3'UTR |
|
7630 | 4396 | 0.33 | FALSE |
| 132 | chr12 | 79934858 | 79935185 | 328 |
|
34.40001 | 11283.205 | 10238831 | 10239158 | 22 | 5631 | 4358.353 | 1.300287e+04 | 4.492378e+00 | 8.776675e+03 | 0.000000e+00 | 7.728658e+00 | -1.149906e+01 | -5.670834e-01 | -1.000000e+100 | -1.071632e+01 | 0.0447099 | TRUE | 0.5228326 | FALSE | PAWR | NM_002583 NP_002574 XM_006719435 XM_006719436 XP_006719498 XP_006719499 | downstream | downstream | 149605 | NA | NA | NA | 7 | NA |
|
99045 | 97637 | 0.33 | FALSE |
| 133 | chr6 | 87795219 | 87795551 | 333 |
|
33.75496 | 11240.402 | 9872877 | 9873209 | 15 | 2707 | 39194.465 | 0.000000e+00 | 1.959703e+05 | 6.066066e-01 | 1.424925e+00 | 0.000000e+00 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | NaN | 0.0449434 | TRUE | 0.5228326 | FALSE | CGA | NM_000735 NM_001252383 NP_000726 NP_001239312 | inside exon | inside | 9314 | inside exon | 0 | 5 | 5 | overlaps 3'UTR |
|
9649 | 2444 | 0.33 | FALSE |
| 134 | chr2 | 217537053 | 217537440 | 388 |
|
28.90477 | 11215.050 | 23438000 | 23438387 | 55 | 6953 | 6481.196 | 5.552320e+01 | 7.680643e+03 | 7.096649e+00 | 1.309123e+04 | 1.157149e+04 | 7.111993e+00 | -2.967881e+00 | 7.881294e+00 | 7.703269e+00 | 0.0450212 | TRUE | 0.5228326 | FALSE | IGFBP5 | NM_000599 NP_000590 | inside exon | inside | 22832 | inside exon | 0 | 4 | 4 | 3'UTR |
|
23444 | 18024 | 0.33 | FALSE |
| 135 | chr5 | 120035949 | 120036292 | 344 |
|
32.45465 | 11164.399 | 11491155 | 11491498 | 19 | 4521 | 3767.339 | 1.490153e+04 | 7.835756e+00 | 3.925358e+03 | 1.571221e+00 | 3.938953e-01 | -1.089310e+01 | -1.924565e+00 | -1.321129e+01 | -1.520729e+01 | 0.0456438 | TRUE | 0.5228326 | FALSE | PRR16 | NM_016644 NP_057728 XM_005272010 XM_005272011 XM_005272012 XP_005272067 XP_005272068 XP_005272069 | downstream | downstream | 235930 | NA | NA | NA | 3 | NA |
|
222945 | 205505 | 0.35 | FALSE |
| 136 | chr10 | 53793561 | 53793862 | 302 |
|
36.83200 | 11123.265 | 5491186 | 5491487 | 7 | 5594 | 6324.201 | 1.564287e+04 | 5.344536e+01 | 1.592469e+04 | 0.000000e+00 | 0.000000e+00 | -8.193225e+00 | 2.575960e-02 | -1.000000e+100 | -1.000000e+100 | 0.0460329 | TRUE | 0.5228326 | FALSE | PRKG1 | NM_001098512 NM_006258 NP_001091982 NP_006249 XM_005269970 XM_005269971 XM_005269972 XP_005270027 XP_005270028 XP_005270029 | inside intron | inside | 959327 | inside intron | 20382 | 6 | 18 | inside transcription region |
|
1223876 | 1219309 | 0.35 | FALSE |
| 137 | chr5 | 92929683 | 92930062 | 380 |
|
29.09485 | 11056.042 | 9128801 | 9129180 | 13 | 857 | 1859.638 | 3.144737e-01 | 6.644737e-01 | 3.986842e-01 | 6.503689e+03 | 2.793121e+03 | 1.079273e+00 | 3.423072e-01 | 1.433603e+01 | 1.311665e+01 | 0.0465777 | TRUE | 0.5228326 | FALSE | NR2F1 | NM_005654 NP_005645 | overlaps 3' | overlaps 3' | 8953 | inside exon | 0 | 4 | 4 | 3'UTR |
|
9056 | 8818 | 0.35 | FALSE |
| 138 | chr6 | 91380410 | 91380690 | 281 |
|
38.82218 | 10909.032 | 10443541 | 10443821 | 17 | 3481 | 8932.939 | 2.798177e+04 | 5.157473e+01 | 1.659841e+04 | 1.508363e+01 | 1.785587e+01 | -9.083607e+00 | -7.534419e-01 | -1.085729e+01 | -1.061387e+01 | 0.0475116 | TRUE | 0.5228326 | FALSE | MAP3K7 | NM_003188 NM_145331 NM_145332 NM_145333 NP_003179 NP_663304 NP_663305 NP_663306 XM_006715553 XP_006715616 | upstream | upstream | 83390 | NA | NA | NA | 17 | NA |
|
73728 | 70382 | 0.35 | FALSE |
| 139 | chr6 | 31132421 | 31132644 | 224 |
|
48.61635 | 10890.063 | 3899824 | 3900047 | 9 | 1641 | 18081.934 | 3.749322e+04 | 6.802679e+01 | 5.283186e+04 | 1.890625e+00 | 1.468080e+01 | -9.106311e+00 | 4.947785e-01 | -1.427548e+01 | -1.131848e+01 | 0.0475116 | TRUE | 0.5228326 | FALSE | POU5F1 | NM_001173531 NM_001285986 NM_001285987 NM_002701 NM_203289 NP_001167002 NP_001272915 NP_001272916 NP_002692 NP_976034 | inside exon | inside | 5807 | inside exon | 0 | 5 | 5 | inside transcription region |
|
6337 | 6019 | 0.35 | FALSE |
| 140 | chr5 | 121812130 | 121812455 | 326 |
|
33.36353 | 10876.512 | 11608426 | 11608751 | 21 | 3455 | 3994.339 | 1.216550e+04 | 1.416871e+01 | 7.788117e+03 | 2.363497e+00 | 1.549080e+00 | -9.745871e+00 | -6.434489e-01 | -1.232958e+01 | -1.293910e+01 | 0.0475116 | TRUE | 0.5228326 | FALSE | MGC32805 | NR_051996 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.35 | FALSE |
| 141 | chr3 | 112138588 | 112138829 | 242 |
|
44.94289 | 10876.180 | 10612985 | 10613226 | 20 | 4830 | 14458.867 | 5.504348e+04 | 4.913017e+01 | 1.719761e+04 | 2.272727e+00 | 1.845041e+00 | -1.012975e+01 | -1.678364e+00 | -1.456386e+01 | -1.486463e+01 | 0.0475116 | TRUE | 0.5228326 | FALSE | BTLA | NM_001085357 NM_181780 NP_001078826 NP_861445 XM_005247136 XP_005247193 | downstream | downstream | 79579 | NA | NA | NA | 5 | NA |
|
35595 | 33250 | 0.35 | FALSE |
| 142 | chr5 | 75655754 | 75656101 | 348 |
|
31.22180 | 10865.186 | 7389724 | 7390071 | 9 | 2435 | 3486.138 | 1.027050e+04 | 1.810345e+01 | 7.132165e+03 | 6.724138e+00 | 3.196839e+00 | -9.148026e+00 | -5.260942e-01 | -1.057687e+01 | -1.164957e+01 | 0.0475116 | TRUE | 0.5228326 | FALSE | SV2C | NM_014979 NP_055794 XM_005248470 XP_005248527 | downstream | downstream | 276449 | NA | NA | NA | 13 | NA |
|
242111 | 193796 | 0.35 | FALSE |
| 143 | chr13 | 51744369 | 51744657 | 289 |
|
37.57257 | 10858.473 | 3855204 | 3855492 | 6 | 5837 | 5024.803 | 1.248068e+04 | 2.958478e-01 | 1.264256e+04 | 0.000000e+00 | 4.775087e-01 | -1.536448e+01 | 1.859160e-02 | -1.000000e+100 | -1.467381e+01 | 0.0475116 | TRUE | 0.5228326 | FALSE | LINC00371 | NR_102431 NR_102432 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.35 | FALSE |
| 144 | chr20 | 12324746 | 12325113 | 368 |
|
29.46459 | 10842.970 | 1422222 | 1422589 | 2 | 4153 | 2541.613 | 9.642151e+03 | 2.487772e+00 | 3.061981e+03 | 0.000000e+00 | 1.445652e+00 | -1.192029e+01 | -1.654890e+00 | -1.000000e+100 | -1.270342e+01 | 0.0475894 | TRUE | 0.5228326 | FALSE | BTBD3 | NM_001282550 NM_001282551 NM_001282552 NM_001282554 NM_014962 NM_181443 NP_001269479 NP_001269480 NP_001269481 NP_001269483 NP_055777 NP_852108 XM_006723550 XM_006723551 XP_006723613 XP_006723614 | downstream | downstream | 453269 | NA | NA | NA | 5 | NA |
|
35766 | 5207 | 0.35 | FALSE |
| 145 | chr13 | 56157484 | 56157848 | 365 |
|
29.68172 | 10833.827 | 4516242 | 4516606 | 12 | 5555 | 2608.458 | 1.038647e+04 | 5.263014e+00 | 2.650477e+03 | 0.000000e+00 | 8.356160e-02 | -1.094653e+01 | -1.970381e+00 | -1.000000e+100 | -1.692343e+01 | 0.0475894 | TRUE | 0.5228326 | FALSE | MIR5007 | NR_049804 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.35 | FALSE |
| 146 | chr5 | 120034920 | 120035239 | 320 |
|
33.82118 | 10822.777 | 11490126 | 11490445 | 19 | 4521 | 5176.292 | 1.401236e+04 | 3.442656e+01 | 1.183404e+04 | 2.906250e-01 | 3.375000e-01 | -8.668962e+00 | -2.437571e-01 | -1.555718e+01 | -1.534145e+01 | 0.0475894 | TRUE | 0.5228326 | FALSE | PRR16 | NM_016644 NP_057728 XM_005272010 XM_005272011 XM_005272012 XP_005272067 XP_005272068 XP_005272069 | downstream | downstream | 234901 | NA | NA | NA | 3 | NA |
|
222945 | 205505 | 0.35 | FALSE |
| 147 | chr5 | 120036353 | 120036701 | 349 |
|
31.01040 | 10822.628 | 11491559 | 11491907 | 19 | 4521 | 3012.731 | 1.223663e+04 | 2.002865e+00 | 2.825020e+03 | 0.000000e+00 | 0.000000e+00 | -1.257685e+01 | -2.114874e+00 | -1.000000e+100 | -1.000000e+100 | 0.0475894 | TRUE | 0.5228326 | FALSE | PRR16 | NM_016644 NP_057728 XM_005272010 XM_005272011 XM_005272012 XP_005272067 XP_005272068 XP_005272069 | downstream | downstream | 236334 | NA | NA | NA | 3 | NA |
|
222945 | 205505 | 0.35 | FALSE |
| 148 | chrX | 91360196 | 91360513 | 318 |
|
33.58445 | 10679.855 | 6907477 | 6907794 | 13 | 5524 | 4106.989 | 1.189369e+04 | 3.050314e+01 | 8.609958e+03 | 0.000000e+00 | 7.940252e-01 | -8.607023e+00 | -4.661186e-01 | -1.000000e+100 | -1.387065e+01 | 0.0485233 | TRUE | 0.5228326 | FALSE | PCDH11X | NM_001168360 NM_001168361 NM_001168362 NM_001168363 NM_014522 NM_032967 NM_032968 NM_032969 NP_001161832 NP_001161833 NP_001161834 NP_001161835 NP_055337 NP_116749 NP_116750 NP_116751 | inside intron | inside | 269736 | inside intron | 95861 | 3 | 7 | inside transcription region |
|
787768 | 632811 | 0.35 | FALSE |
| 149 | chr16 | 13449230 | 13449601 | 372 |
|
28.52249 | 10610.366 | 2743554 | 2743925 | 5 | 5109 | 2319.302 | 7.922539e+03 | 8.560484e+00 | 3.664595e+03 | 5.430108e-01 | 2.715054e-01 | -9.854055e+00 | -1.112309e+00 | -1.383269e+01 | -1.483269e+01 | 0.0492237 | TRUE | 0.5228326 | FALSE | SHISA9 | NM_001145204 NM_001145205 NP_001138676 NP_001138677 XM_005255539 XP_005255596 | downstream | downstream | 453753 | NA | NA | NA | 5 | NA |
|
338796 | 333344 | 0.35 | FALSE |
| 150 | chr14 | 47577617 | 47577911 | 295 |
|
35.77314 | 10553.077 | 2717997 | 2718291 | 7 | 4412 | 4821.758 | 1.494442e+04 | 2.466102e+01 | 9.137661e+03 | 5.135593e-01 | 1.540678e+00 | -9.243158e+00 | -7.097096e-01 | -1.482872e+01 | -1.324375e+01 | 0.0495350 | TRUE | 0.5228326 | FALSE | MDGA2 | NM_001113498 NM_182830 NP_001106970 NP_878250 NR_103766 XM_006720068 XP_006720131 | inside intron | inside | 517817 | inside intron | 11291 | 6 | 15 | 5' UTR |
|
755585 | 189427 | 0.35 | FALSE |
| 151 | chr14 | 38662564 | 38662913 | 350 |
|
29.98959 | 10496.357 | 2169451 | 2169800 | 3 | 5592 | 2789.569 | 9.513387e+03 | 1.114000e+01 | 4.422614e+03 | 4.171429e-01 | 2.885714e-01 | -9.738066e+00 | -1.105060e+00 | -1.447713e+01 | -1.500874e+01 | 0.0496906 | TRUE | 0.5228326 | FALSE | SSTR1 | NM_001049 NP_001040 | upstream | upstream | 14291 | NA | NA | NA | 3 | NA |
|
5064 | 1175 | 0.35 | FALSE |
| 152 | chr4 | 88846724 | 88847060 | 337 |
|
31.10626 | 10482.811 | 8281265 | 8281601 | 18 | 5462 | 3438.477 | 1.187944e+04 | 3.507122e+01 | 5.274605e+03 | 3.265579e+00 | 0.000000e+00 | -8.403964e+00 | -1.171332e+00 | -1.182884e+01 | -1.000000e+100 | 0.0497685 | TRUE | 0.5228326 | FALSE | SPP1 | NM_000582 NM_001040058 NM_001040060 NM_001251829 NM_001251830 NP_000573 NP_001035147 NP_001035149 NP_001238758 NP_001238759 | upstream | upstream | 49742 | NA | NA | NA | 7 | NA |
|
7761 | 6000 | 0.35 | FALSE |
| 153 | chr10 | 91844959 | 91845224 | 266 |
|
39.11111 | 10403.556 | 9358333 | 9358598 | 15 | 3399 | 7572.206 | 1.971768e+04 | 4.406391e+01 | 1.808853e+04 | 3.796992e+00 | 6.958647e+00 | -8.805676e+00 | -1.244142e-01 | -1.234234e+01 | -1.146840e+01 | 0.0500798 | FALSE | 0.5228326 | FALSE | LINC00865 | NR_038382 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.35 | FALSE |
| 154 | chr2 | 64482298 | 64482661 | 364 |
|
28.27498 | 10292.093 | 6919547 | 6919910 | 15 | 2909 | 3094.671 | 1.073615e+04 | 2.164148e+01 | 4.702339e+03 | 2.960165e+00 | 1.026099e+01 | -8.954462e+00 | -1.191026e+00 | -1.182451e+01 | -1.003109e+01 | 0.0509358 | FALSE | 0.5228326 | FALSE | LINC00309 | NR_033837 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.36 | FALSE |
| 155 | chr13 | 56229789 | 56230096 | 308 |
|
33.31487 | 10260.980 | 4530253 | 4530560 | 13 | 4045 | 3850.772 | 1.527416e+04 | 3.719156e+00 | 3.973953e+03 | 5.016234e-01 | 1.529221e+00 | -1.200383e+01 | -1.942446e+00 | -1.489413e+01 | -1.328601e+01 | 0.0509358 | FALSE | 0.5228326 | FALSE | MIR5007 | NR_049804 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.36 | FALSE |
| 156 | chrX | 124525360 | 124525694 | 335 |
|
30.34314 | 10164.953 | 10073511 | 10073845 | 30 | 5372 | 2758.854 | 8.217360e+03 | 1.971642e+00 | 5.574037e+03 | 1.194030e-01 | 7.835821e-01 | -1.202506e+01 | -5.599523e-01 | -1.607055e+01 | -1.335630e+01 | 0.0523367 | FALSE | 0.5228326 | FALSE | LOC100129520 | NM_001195272 NP_001182201 XM_005262352 XP_005262409 | downstream | downstream | 71391 | NA | NA | NA | 1 | NA |
|
2981 | 2981 | 0.36 | FALSE |
| 157 | chr1 | 215583978 | 215584236 | 259 |
|
39.16608 | 10144.015 | 28103836 | 28104094 | 35 | 4889 | 8733.091 | 2.765404e+04 | 5.861969e+01 | 1.592406e+04 | 1.205985e+01 | 1.667375e+01 | -8.881889e+00 | -7.962815e-01 | -1.116306e+01 | -1.069570e+01 | 0.0523367 | FALSE | 0.5228326 | FALSE | KCTD3 | NM_016121 NP_057205 XM_005273156 XM_005273157 XM_005273158 XP_005273213 XP_005273214 XP_005273215 | upstream | upstream | 156499 | NA | NA | NA | 18 | NA |
|
54414 | 52931 | 0.36 | FALSE |
| 158 | chr4 | 187163158 | 187163451 | 294 |
|
34.46163 | 10131.719 | 16444125 | 16444418 | 51 | 294 | 3912.412 | 9.703162e+03 | 3.435374e-01 | 9.858029e+03 | 0.000000e+00 | 5.272109e-01 | -1.478570e+01 | 2.284430e-02 | -1.000000e+100 | -1.416779e+01 | 0.0523367 | FALSE | 0.5228326 | FALSE | KLKB1 | NM_000892 NP_000883 XM_005262987 XM_006714213 XP_005263044 XP_006714276 | inside intron | inside | 14486 | inside intron | -3639 | 7 | 15 | inside transcription region |
|
30953 | 25911 | 0.36 | FALSE |
| 159 | chr1 | 55490840 | 55491122 | 283 |
|
35.75147 | 10117.665 | 10679232 | 10679514 | 10 | 5549 | 5357.094 | 1.293638e+04 | 4.537986e+01 | 1.379639e+04 | 5.531802e+00 | 1.784452e+00 | -8.155166e+00 | 9.285630e-02 | -1.119140e+01 | -1.282367e+01 | 0.0525701 | FALSE | 0.5228326 | FALSE | PCSK9 | NM_174936 NP_777596 NR_110451 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.36 | FALSE |
| 160 | chr6 | 115355612 | 115355933 | 322 |
|
31.30581 | 10080.469 | 12488740 | 12489061 | 24 | 2818 | 3521.688 | 1.036132e+04 | 1.602329e+01 | 7.220081e+03 | 4.861801e+00 | 6.158385e+00 | -9.336821e+00 | -5.211205e-01 | -1.105743e+01 | -1.071637e+01 | 0.0529593 | FALSE | 0.5228326 | FALSE | HS3ST5 | NM_153612 NP_705840 XM_006715379 XP_006715442 | upstream | upstream | 692072 | NA | NA | NA | 5 | NA |
|
286790 | 5588 | 0.36 | FALSE |
| 161 | chr11 | 27652852 | 27653198 | 347 |
|
28.97012 | 10052.633 | 3884184 | 3884530 | 11 | 5437 | 2652.198 | 1.065127e+04 | 1.375793e+01 | 2.592764e+03 | 2.910663e+00 | 2.910663e-01 | -9.596547e+00 | -2.038463e+00 | -1.183739e+01 | -1.515932e+01 | 0.0530371 | FALSE | 0.5228326 | FALSE | BDNF-AS | NR_002832 NR_033312 NR_033313 NR_033314 NR_033315 | NA | NA | 0 | NA | NA | NA | 7 | NA |
|
0 | 0 | 0.36 | FALSE |
| 162 | chr20 | 13340738 | 13341009 | 272 |
|
36.78382 | 10005.199 | 1484602 | 1484873 | 4 | 4259 | 5965.106 | 2.195889e+04 | 1.002941e+01 | 7.845642e+03 | 2.143382e+00 | 8.825368e+00 | -1.109635e+01 | -1.484842e+00 | -1.332263e+01 | -1.128086e+01 | 0.0534262 | FALSE | 0.5228326 | FALSE | TASP1 | NM_017714 NP_060184 XM_006723589 XM_006723590 XP_006723652 XP_006723653 XR_430268 | NA | NA | 0 | NA | NA | NA | 10 | NA |
|
0 | 0 | 0.36 | FALSE |
| 163 | chr3 | 46619249 | 46619494 | 246 |
|
40.66714 | 10004.116 | 5030253 | 5030498 | 11 | 4701 | 6777.180 | 1.900786e+04 | 2.172764e+00 | 1.487587e+04 | 0.000000e+00 | 0.000000e+00 | -1.309478e+01 | -3.536223e-01 | -1.000000e+100 | -1.000000e+100 | 0.0534262 | FALSE | 0.5228326 | FALSE | LRRC2 | NM_024512 NM_024750 NP_078788 XM_006713332 XP_006713395 | inside intron | inside | 2078 | inside intron | -1933 | 1 | 9 | 5' UTR |
|
64694 | 32577 | 0.36 | FALSE |
| 164 | chr5 | 75657904 | 75658188 | 285 |
|
34.95377 | 9961.825 | 7391866 | 7392150 | 9 | 2435 | 4366.318 | 1.522206e+04 | 6.128070e+00 | 6.600898e+03 | 7.070175e-01 | 1.798246e+00 | -1.127844e+01 | -1.205429e+00 | -1.439406e+01 | -1.304729e+01 | 0.0537375 | FALSE | 0.5228326 | FALSE | SV2C | NM_014979 NP_055794 XM_005248470 XP_005248527 | downstream | downstream | 278599 | NA | NA | NA | 13 | NA |
|
242111 | 193796 | 0.36 | FALSE |
| 165 | chr11 | 68458385 | 68458644 | 260 |
|
37.77039 | 9820.301 | 9302606 | 9302865 | 15 | 6594 | 13136.770 | 1.214501e+04 | 2.415038e+02 | 5.325202e+04 | 3.501923e+00 | 4.181731e+01 | -5.652174e+00 | 2.132472e+00 | -1.175993e+01 | -8.182048e+00 | 0.0551383 | FALSE | 0.5228326 | FALSE | GAL | NM_015973 NP_057057 XM_006718580 XP_006718643 | overlaps 3' | overlaps 3' | 6402 | inside exon | 0 | 6 | 6 | overlaps 3'UTR |
|
6660 | 6063 | 0.36 | FALSE |
| 166 | chr11 | 27650665 | 27650969 | 305 |
|
32.18282 | 9815.761 | 3881997 | 3882301 | 11 | 5437 | 3656.262 | 1.214985e+04 | 6.632623e+01 | 6.064244e+03 | 2.032787e-01 | 6.868852e-01 | -7.517143e+00 | -1.002539e+00 | -1.586712e+01 | -1.411051e+01 | 0.0552162 | FALSE | 0.5228326 | FALSE | BDNF-AS | NR_002832 NR_033312 NR_033313 NR_033314 NR_033315 | NA | NA | 0 | NA | NA | NA | 7 | NA |
|
0 | 0 | 0.36 | FALSE |
| 167 | chr8 | 72614479 | 72614768 | 290 |
|
33.83121 | 9811.050 | 7370486 | 7370775 | 12 | 1416 | 3879.399 | 1.081176e+04 | 4.806897e+00 | 8.580428e+03 | 0.000000e+00 | 0.000000e+00 | -1.113521e+01 | -3.334800e-01 | -1.000000e+100 | -1.000000e+100 | 0.0552162 | FALSE | 0.5228326 | FALSE | MSC | NM_005098 NP_005089 | downstream | downstream | 141963 | NA | NA | NA | 2 | NA |
|
2954 | 1517 | 0.36 | FALSE |
| 168 | chr4 | 120919951 | 120920299 | 349 |
|
28.10474 | 9808.555 | 11516671 | 11517019 | 33 | 5835 | 2250.552 | 8.612185e+03 | 5.027221e+00 | 2.635403e+03 | 0.000000e+00 | 1.446991e-01 | -1.074240e+01 | -1.708356e+00 | -1.000000e+100 | -1.586104e+01 | 0.0552940 | FALSE | 0.5228326 | FALSE | MAD2L1 | NM_002358 NP_002349 | downstream | downstream | 67714 | NA | NA | NA | 5 | NA |
|
7434 | 6616 | 0.36 | FALSE |
| 169 | chr9 | 96111727 | 96112067 | 341 |
|
28.74277 | 9801.285 | 8986961 | 8987301 | 14 | 5407 | 2404.440 | 8.378496e+03 | 2.438416e+00 | 3.634896e+03 | 4.442815e-01 | 5.923754e+00 | -1.174653e+01 | -1.204777e+00 | -1.420293e+01 | -1.046596e+01 | 0.0553718 | FALSE | 0.5228326 | FALSE | C9orf129 | NM_001098808 NP_001092278 XM_006717117 XP_006717180 | upstream | upstream | 3031 | NA | NA | NA | 5 | NA |
|
28215 | 17555 | 0.36 | FALSE |
| 170 | chr1 | 183585783 | 183586083 | 301 |
|
32.46501 | 9771.968 | 24772610 | 24772910 | 31 | 3424 | 4080.118 | 1.297081e+04 | 4.075748e+01 | 7.381470e+03 | 1.674419e+00 | 5.872093e+00 | -8.313989e+00 | -8.132889e-01 | -1.291932e+01 | -1.110911e+01 | 0.0556831 | FALSE | 0.5228326 | FALSE | ARPC5 | NM_001270439 NM_005717 NP_001257368 NP_005708 | downstream | downstream | 18993 | NA | NA | NA | 4 | NA |
|
9748 | 8127 | 0.36 | FALSE |
| 171 | chr2 | 67563374 | 67563711 | 338 |
|
28.75356 | 9718.702 | 7288186 | 7288523 | 17 | 8129 | 2772.069 | 1.289273e+04 | 1.677515e+00 | 9.637041e+02 | 1.964497e+00 | 2.662722e-01 | -1.290795e+01 | -3.741824e+00 | -1.268011e+01 | -1.556330e+01 | 0.0560722 | FALSE | 0.5228326 | FALSE | ETAA1 | NM_019002 NP_061875 XM_005264374 XM_005264375 XM_005264376 XM_005264377 XM_005264378 XP_005264431 XP_005264432 XP_005264433 XP_005264434 XP_005264435 | upstream | upstream | 60731 | NA | NA | NA | 6 | NA |
|
13091 | 12589 | 0.36 | FALSE |
| 172 | chr2 | 189849486 | 189849688 | 203 |
|
47.75536 | 9694.339 | 20118885 | 20119087 | 41 | 27987 | 31040.112 | 2.766010e+00 | 2.495216e+04 | 1.123153e+00 | 1.302420e+05 | 2.487685e+00 | 1.313907e+01 | -1.300252e+00 | 1.552303e+01 | -1.530026e-01 | 0.0561500 | FALSE | 0.5228326 | FALSE | COL3A1 | NM_000090 NP_000081 | inside exon | inside | 10387 | inside exon | 0 | 2 | 51 | inside transcription region |
|
38373 | 37284 | 0.36 | FALSE |
| 173 | chr8 | 114524388 | 114524622 | 235 |
|
40.91917 | 9616.004 | 10925045 | 10925279 | 24 | 2224 | 8596.909 | 2.479842e+04 | 1.073617e+01 | 1.816013e+04 | 1.310851e+01 | 2.148936e+00 | -1.117355e+01 | -4.494735e-01 | -1.088553e+01 | -1.349434e+01 | 0.0573952 | FALSE | 0.5228326 | FALSE | CSMD3 | NM_052900 NM_198123 NM_198124 NP_443132 NP_937756 NP_937757 | upstream | upstream | 75146 | NA | NA | NA | 71 | NA |
|
1214083 | 1212083 | 0.36 | FALSE |
| 174 | chr1 | 222150302 | 222150534 | 233 |
|
40.68719 | 9480.114 | 28572595 | 28572827 | 39 | 8614 | 9823.109 | 1.895463e+04 | 8.763519e+01 | 3.005749e+04 | 8.090129e-01 | 1.497639e+01 | -7.756824e+00 | 6.651742e-01 | -1.451603e+01 | -1.030564e+01 | 0.0587182 | FALSE | 0.5228326 | FALSE | DUSP10 | NM_007207 NM_144728 NM_144729 NP_009138 NP_653329 NP_653330 | upstream | upstream | 234786 | NA | NA | NA | 4 | NA |
|
40752 | 37332 | 0.36 | FALSE |
| 175 | chr9 | 85501959 | 85502238 | 280 |
|
33.80580 | 9465.625 | 7688936 | 7689215 | 9 | 2367 | 4375.700 | 1.616701e+04 | 1.239821e+01 | 5.688286e+03 | 7.214286e+00 | 3.596429e+00 | -1.034870e+01 | -1.506987e+00 | -1.112991e+01 | -1.213420e+01 | 0.0589517 | FALSE | 0.5228326 | FALSE | RASEF | NM_152573 NP_689786 XM_005251730 XM_005251731 XP_005251787 XP_005251788 | downstream | downstream | 175805 | NA | NA | NA | 17 | NA |
|
83543 | 80190 | 0.36 | FALSE |
| 176 | chr16 | 13449979 | 13450338 | 360 |
|
26.21657 | 9437.965 | 2744303 | 2744662 | 5 | 5109 | 1764.109 | 6.152786e+03 | 6.333333e-01 | 2.666149e+03 | 1.361111e-01 | 8.416667e-01 | -1.324599e+01 | -1.206483e+00 | -1.546417e+01 | -1.283570e+01 | 0.0590295 | FALSE | 0.5228326 | FALSE | SHISA9 | NM_001145204 NM_001145205 NP_001138676 NP_001138677 XM_005255539 XP_005255596 | downstream | downstream | 454502 | NA | NA | NA | 5 | NA |
|
338796 | 333344 | 0.36 | FALSE |
| 177 | chr6 | 6028378 | 6028633 | 256 |
|
36.63690 | 9379.045 | 725333 | 725588 | 1 | 256 | 6528.202 | 2.155446e+04 | 3.594531e+01 | 1.103030e+04 | 2.958984e+00 | 1.734180e+01 | -9.227967e+00 | -9.665145e-01 | -1.283060e+01 | -1.027952e+01 | 0.0594965 | FALSE | 0.5228326 | FALSE | NRN1 | NM_001278710 NM_001278711 NM_016588 NP_001265639 NP_001265640 NP_057672 XM_006715106 XM_006715107 XP_006715169 XP_006715170 | upstream | upstream | 20745 | NA | NA | NA | 3 | NA |
|
9400 | 7773 | 0.36 | FALSE |
| 178 | chr8 | 115296467 | 115296742 | 276 |
|
33.91086 | 9359.398 | 10966474 | 10966749 | 26 | 5529 | 3749.466 | 1.391326e+04 | 0.000000e+00 | 4.834067e+03 | 0.000000e+00 | 0.000000e+00 | -1.000000e+100 | -1.525152e+00 | -1.000000e+100 | -1.000000e+100 | 0.0596521 | FALSE | 0.5228326 | FALSE | CSMD3 | NM_052900 NM_198123 NM_198124 NP_443132 NP_937756 NP_937757 | upstream | upstream | 847225 | NA | NA | NA | 71 | NA |
|
1214083 | 1212083 | 0.36 | FALSE |
| 179 | chr13 | 51749917 | 51750205 | 289 |
|
32.19980 | 9305.742 | 3860752 | 3861040 | 6 | 5837 | 3247.074 | 7.748125e+03 | 3.425606e-01 | 8.486901e+03 | 0.000000e+00 | 0.000000e+00 | -1.446520e+01 | 1.313908e-01 | -1.000000e+100 | -1.000000e+100 | 0.0601969 | FALSE | 0.5228326 | FALSE | LINC00371 | NR_102431 NR_102432 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.36 | FALSE |
| 180 | chr3 | 78634578 | 78634802 | 225 |
|
41.33894 | 9301.261 | 8717328 | 8717552 | 16 | 1246 | 8458.931 | 3.168996e+04 | 2.372444e+01 | 1.058052e+04 | 2.244444e-01 | 2.244444e-01 | -1.038344e+01 | -1.582615e+00 | -1.710731e+01 | -1.710731e+01 | 0.0601969 | FALSE | 0.5228326 | FALSE | ROBO1 | NM_001145845 NM_002941 NM_133631 NP_001139317 NP_002932 NP_598334 XM_006713276 XM_006713277 XM_006713278 XP_006713339 XP_006713340 XP_006713341 | downstream | downstream | 103120 | NA | NA | NA | 23 | NA |
|
91534 | 60790 | 0.36 | FALSE |
| 181 | chrX | 115951834 | 115952085 | 252 |
|
36.90650 | 9300.439 | 9407387 | 9407638 | 26 | 5174 | 5575.753 | 1.620834e+04 | 1.513690e+01 | 1.165228e+04 | 2.003968e-01 | 2.799603e+00 | -1.006445e+01 | -4.761239e-01 | -1.630352e+01 | -1.249923e+01 | 0.0601969 | FALSE | 0.5228326 | FALSE | CT83 | NM_001017978 NP_001017978 | upstream | upstream | 357640 | NA | NA | NA | 2 | NA |
|
1341 | 1109 | 0.36 | FALSE |
| 182 | chr8 | 133097951 | 133098147 | 197 |
|
46.48821 | 9158.176 | 12343759 | 12343955 | 37 | 5510 | 11130.019 | 2.756772e+04 | 2.380711e+00 | 2.807856e+04 | 0.000000e+00 | 1.439086e+00 | -1.349930e+01 | 2.648870e-02 | -1.000000e+100 | -1.422554e+01 | 0.0612086 | FALSE | 0.5228326 | FALSE | HHLA1 | NM_001145095 NM_005712 NP_001138567 | inside intron | inside | 19365 | inside intron | -1753 | 9 | 16 | inside transcription region |
|
43779 | 41270 | 0.36 | FALSE |
| 183 | chr6 | 132225828 | 132226114 | 287 |
|
31.90077 | 9155.521 | 13973231 | 13973517 | 41 | 4872 | 3258.073 | 1.174632e+04 | 2.109756e+00 | 4.539469e+03 | 0.000000e+00 | 2.463415e+00 | -1.244285e+01 | -1.371614e+00 | -1.000000e+100 | -1.221926e+01 | 0.0612086 | FALSE | 0.5228326 | FALSE | ENPP1 | NM_006208 NP_006199 XM_005267017 XP_005267074 | downstream | downstream | 96672 | NA | NA | NA | 25 | NA |
|
87139 | 82475 | 0.36 | FALSE |
| 184 | chr20 | 36757358 | 36757691 | 334 |
|
27.31890 | 9124.511 | 4128075 | 4128408 | 5 | 1818 | 7189.699 | 2.022455e+01 | 1.113601e+04 | 1.766617e+01 | 2.475453e+04 | 2.006287e+01 | 9.104909e+00 | -1.951186e-01 | 1.025737e+01 | -1.157940e-02 | 0.0614421 | FALSE | 0.5228326 | FALSE | TGM2 | NM_004613 NM_198951 NP_004604 NP_945189 | inside exon | inside | 36009 | inside exon | 0 | 12 | 12 | 3'UTR |
|
36836 | 34979 | 0.36 | FALSE |
| 185 | chr15 | 35085446 | 35085770 | 325 |
|
27.86645 | 9056.597 | 1977601 | 1977925 | 1 | 5287 | 10644.072 | 2.417246e+02 | 4.958842e+04 | 3.051491e+03 | 2.136923e+00 | 3.365846e+02 | 7.680495e+00 | 3.658078e+00 | -6.821686e+00 | 4.776048e-01 | 0.0616756 | FALSE | 0.5228326 | FALSE | ACTC1 | NM_005159 NP_005150 | inside exon | inside | 2157 | inside exon | 0 | 3 | 7 | inside transcription region |
|
7630 | 4396 | 0.36 | FALSE |
| 186 | chr11 | 27653248 | 27653510 | 263 |
|
34.38575 | 9043.452 | 3884580 | 3884842 | 11 | 5437 | 4682.775 | 1.487039e+04 | 1.736122e+01 | 8.519312e+03 | 5.946768e+00 | 8.688213e-01 | -9.742358e+00 | -8.036333e-01 | -1.128805e+01 | -1.406302e+01 | 0.0616756 | FALSE | 0.5228326 | FALSE | BDNF-AS | NR_002832 NR_033312 NR_033313 NR_033314 NR_033315 | NA | NA | 0 | NA | NA | NA | 7 | NA |
|
0 | 0 | 0.36 | FALSE |
| 187 | chr18 | 54085755 | 54085974 | 220 |
|
41.01858 | 9024.087 | 4710649 | 4710868 | 5 | 3207 | 7994.013 | 2.280833e+04 | 1.551364e+01 | 1.714300e+04 | 1.363636e-01 | 3.086364e+00 | -1.052181e+01 | -4.119409e-01 | -1.735174e+01 | -1.285136e+01 | 0.0617534 | FALSE | 0.5228326 | FALSE | TXNL1 | NM_004786 NP_004777 NR_024546 XM_006722580 XM_006722581 XP_006722643 XP_006722644 XR_430086 | downstream | downstream | 220296 | NA | NA | NA | 8 | NA |
|
36217 | 35413 | 0.36 | FALSE |
| 188 | chr9 | 96114728 | 96114942 | 215 |
|
41.96411 | 9022.283 | 8989962 | 8990176 | 14 | 5407 | 7540.959 | 2.827816e+04 | 3.655814e+00 | 9.422979e+03 | 0.000000e+00 | 0.000000e+00 | -1.291721e+01 | -1.585433e+00 | -1.000000e+100 | -1.000000e+100 | 0.0617534 | FALSE | 0.5228326 | FALSE | C9orf129 | NM_001098808 NP_001092278 XM_006717117 XP_006717180 | upstream | upstream | 6032 | NA | NA | NA | 5 | NA |
|
28215 | 17555 | 0.36 | FALSE |
| 189 | chr2 | 188905017 | 188905321 | 305 |
|
29.39468 | 8965.378 | 20032156 | 20032460 | 39 | 482 | 3224.548 | 4.844734e+03 | 4.838197e+01 | 1.122902e+04 | 6.000000e-01 | 0.000000e+00 | -6.645804e+00 | 1.212743e+00 | -1.297917e+01 | -1.000000e+100 | 0.0622203 | FALSE | 0.5228326 | FALSE | GULP1 | NM_001252668 NM_001252669 NM_016315 NP_001239597 NP_001239598 NP_057399 NR_045562 NR_045563 XM_006712580 XM_006712581 XM_006712582 XM_006712583 XM_006712584 XM_006712585 XM_006712586 XM_006712587 XM_006712588 XM_006712589 XM_006712590 XM_006712591 XP_006712643 XP_006712644 XP_006712645 XP_006712646 XP_006712647 XP_006712648 XP_006712649 XP_006712650 XP_006712651 XP_006712652 XP_006712653 XP_006712654 | upstream | upstream | 251075 | NA | NA | NA | 7 | NA |
|
250443 | 63720 | 0.36 | FALSE |
| 190 | chr9 | 76702939 | 76703243 | 305 |
|
29.36740 | 8957.057 | 7023919 | 7024223 | 5 | 5530 | 2689.068 | 9.124679e+03 | 1.454098e+00 | 4.313995e+03 | 7.655738e-01 | 4.444262e+00 | -1.261543e+01 | -1.080749e+00 | -1.354094e+01 | -1.100361e+01 | 0.0622981 | FALSE | 0.5228326 | FALSE | RORB | NM_006914 NP_008845 | upstream | upstream | 409009 | NA | NA | NA | 10 | NA |
|
189865 | 187641 | 0.36 | FALSE |
| 191 | chr19 | 54336134 | 54336434 | 301 |
|
29.49213 | 8877.132 | 14737360 | 14737660 | 10 | 5816 | 2675.779 | 1.080562e+04 | 1.481063e+01 | 2.558468e+03 | 0.000000e+00 | 0.000000e+00 | -9.510933e+00 | -2.078429e+00 | -1.000000e+100 | -1.000000e+100 | 0.0633099 | FALSE | 0.5228326 | FALSE | NLRP12 | NM_001277126 NM_001277129 NM_033297 NM_144687 NP_001264055 NP_001264058 NP_653288 | upstream | upstream | 8477 | NA | NA | NA | 10 | NA |
|
30802 | 30125 | 0.36 | FALSE |
| 192 | chr4 | 88854138 | 88854467 | 330 |
|
26.87453 | 8868.594 | 8288618 | 8288947 | 19 | 5968 | 2102.881 | 6.287276e+03 | 2.767273e+01 | 4.199005e+03 | 2.984848e-01 | 1.530303e-01 | -7.827826e+00 | -5.823877e-01 | -1.436249e+01 | -1.532633e+01 | 0.0633877 | FALSE | 0.5228326 | FALSE | SPP1 | NM_000582 NM_001040058 NM_001040060 NM_001251829 NM_001251830 NP_000573 NP_001035147 NP_001035149 NP_001238758 NP_001238759 | upstream | upstream | 42335 | NA | NA | NA | 7 | NA |
|
7761 | 6000 | 0.36 | FALSE |
| 193 | chr16 | 9766930 | 9767216 | 287 |
|
30.89179 | 8865.943 | 2220397 | 2220683 | 4 | 8636 | 3465.800 | 1.523754e+04 | 5.982578e+00 | 2.084115e+03 | 8.153310e-01 | 5.505226e-01 | -1.131457e+01 | -2.870123e+00 | -1.418988e+01 | -1.475647e+01 | 0.0633877 | FALSE | 0.5228326 | FALSE | GRIN2A | NM_000833 NM_001134407 NM_001134408 NP_000824 NP_001127879 NP_001127880 XM_005255267 XM_005255268 XP_005255324 XP_005255325 | downstream | downstream | 509047 | NA | NA | NA | 13 | NA |
|
428998 | 417262 | 0.36 | FALSE |
| 194 | chr2 | 8012994 | 8013299 | 306 |
|
28.85031 | 8828.195 | 586739 | 587044 | 2 | 5921 | 3228.958 | 8.630928e+03 | 3.024673e+01 | 7.471877e+03 | 8.251634e-01 | 1.091340e+01 | -8.156593e+00 | -2.080449e-01 | -1.335255e+01 | -9.627271e+00 | 0.0637768 | FALSE | 0.5228326 | FALSE | LINC00298 | NR_015405 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.36 | FALSE |
| 195 | chr4 | 120920468 | 120920761 | 294 |
|
29.97391 | 8812.329 | 11517188 | 11517481 | 33 | 5835 | 2654.847 | 9.504044e+03 | 2.610544e+00 | 3.767452e+03 | 0.000000e+00 | 1.275510e-01 | -1.182998e+01 | -1.334952e+00 | -1.000000e+100 | -1.618518e+01 | 0.0639324 | FALSE | 0.5228326 | FALSE | MAD2L1 | NM_002358 NP_002349 | downstream | downstream | 67252 | NA | NA | NA | 5 | NA |
|
7434 | 6616 | 0.36 | FALSE |
| 196 | chrX | 86939753 | 86940059 | 307 |
|
28.49616 | 8748.322 | 6794027 | 6794333 | 11 | 4336 | 2260.241 | 7.046248e+03 | 2.257329e+00 | 4.252041e+03 | 0.000000e+00 | 6.579805e-01 | -1.160802e+01 | -7.286998e-01 | -1.000000e+100 | -1.338652e+01 | 0.0648663 | FALSE | 0.5228326 | FALSE | KLHL4 | NM_019117 NM_057162 NP_061990 NP_476503 | downstream | downstream | 167038 | NA | NA | NA | 11 | NA |
|
152335 | 148637 | 0.36 | FALSE |
| 197 | chr20 | 12734844 | 12735111 | 268 |
|
32.15181 | 8616.686 | 1446720 | 1446987 | 3 | 8409 | 3174.104 | 1.210019e+04 | 1.061567e+00 | 3.769271e+03 | 0.000000e+00 | 0.000000e+00 | -1.347655e+01 | -1.682673e+00 | -1.000000e+100 | -1.000000e+100 | 0.0656446 | FALSE | 0.5228326 | FALSE | SPTLC3 | NM_018327 NP_060797 XR_244218 | upstream | upstream | 254516 | NA | NA | NA | 2 | NA |
|
41189 | 40087 | 0.36 | FALSE |
| 198 | chr4 | 24505446 | 24505695 | 250 |
|
34.09952 | 8524.880 | 3124776 | 3125025 | 9 | 1356 | 3966.249 | 1.099132e+04 | 1.852600e+01 | 8.821200e+03 | 0.000000e+00 | 2.020000e-01 | -9.212597e+00 | -3.173176e-01 | -1.000000e+100 | -1.573165e+01 | 0.0664228 | FALSE | 0.5228326 | FALSE | MIR573 | NR_030299 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.36 | FALSE |
| 199 | chr19 | 20269525 | 20269757 | 233 |
|
36.52052 | 8509.280 | 6363543 | 6363775 | 2 | 1721 | 6112.150 | 2.220310e+04 | 1.248069e+01 | 8.327509e+03 | 1.624464e+00 | 1.603219e+01 | -1.079685e+01 | -1.414805e+00 | -1.373851e+01 | -1.043557e+01 | 0.0666563 | FALSE | 0.5228326 | FALSE | ZNF486 | NM_052852 NP_443084 | upstream | upstream | 8266 | NA | NA | NA | 4 | NA |
|
33276 | 30771 | 0.36 | FALSE |
| 200 | chr14 | 101193263 | 101193472 | 210 |
|
40.28070 | 8458.948 | 9355825 | 9356034 | 17 | 8209 | 15435.314 | 7.711905e+00 | 2.388095e+01 | 5.252381e+00 | 6.978024e+02 | 7.644192e+04 | 1.630701e+00 | -5.541157e-01 | 6.499587e+00 | 1.327499e+01 | 0.0669676 | FALSE | 0.5228326 | FALSE | DLK1 | NM_001032997 NM_003836 NP_003827 | inside exon | inside | 61 | inside exon | 0 | 1 | 5 | overlaps 5' UTR |
|
8265 | 7827 | 0.36 | FALSE |
| 201 | chr2 | 189874904 | 189875091 | 188 |
|
44.88912 | 8439.154 | 20140969 | 20141156 | 41 | 27987 | 23140.560 | 3.063830e+00 | 1.864658e+04 | 4.627660e-01 | 9.705108e+04 | 1.609043e+00 | 1.257129e+01 | -2.726981e+00 | 1.495112e+01 | -9.291337e-01 | 0.0672011 | FALSE | 0.5228326 | FALSE | COL3A1 | NM_000090 NP_000081 | inside exon | inside | 35805 | inside exon | 0 | 49 | 51 | inside transcription region |
|
38373 | 37284 | 0.36 | FALSE |
| 202 | chr4 | 17002655 | 17002912 | 258 |
|
32.65203 | 8424.224 | 2630795 | 2631052 | 6 | 5803 | 4300.266 | 1.755138e+04 | 1.100388e+01 | 3.934855e+03 | 0.000000e+00 | 4.089147e+00 | -1.063936e+01 | -2.157202e+00 | -1.000000e+100 | -1.206750e+01 | 0.0673567 | FALSE | 0.5228326 | FALSE | LDB2 | NM_001130834 NM_001290 NP_001124306 NP_001281 XM_005248197 XM_005248198 XM_005248201 XM_005248202 XM_005248203 XM_005248205 XM_006713975 XM_006713976 XM_006713977 XM_006713978 XM_006713979 XM_006713980 XM_006713981 XM_006713982 XM_006713983 XM_006713984 XP_005248254 XP_005248255 XP_005248258 XP_005248259 XP_005248260 XP_005248262 XP_006714038 XP_006714039 XP_006714040 XP_006714041 XP_006714042 XP_006714043 XP_006714044 XP_006714045 XP_006714046 XP_006714047 | upstream | upstream | 102231 | NA | NA | NA | 8 | NA |
|
397259 | 395842 | 0.36 | FALSE |
| 203 | chr1 | 216321956 | 216322119 | 164 |
|
51.01474 | 8366.418 | 28158506 | 28158669 | 37 | 3091 | 17846.946 | 4.599412e+04 | 9.097561e+00 | 4.323120e+04 | 0.000000e+00 | 3.079268e-01 | -1.230368e+01 | -8.937640e-02 | -1.000000e+100 | -1.718850e+01 | 0.0679793 | FALSE | 0.5228326 | FALSE | USH2A | NM_007123 NM_206933 NP_009054 NP_996816 | inside intron | inside | 274619 | inside intron | -26475 | 21 | 72 | inside transcription region |
|
800502 | 796555 | 0.37 | FALSE |
| 204 | chr1 | 113362803 | 113363087 | 285 |
|
29.23176 | 8331.052 | 16408742 | 16409026 | 26 | 285 | 4990.530 | 3.594146e+03 | 7.728293e+03 | 1.353586e+04 | 0.000000e+00 | 9.435439e+01 | 1.104501e+00 | 1.913065e+00 | -1.000000e+100 | -5.251416e+00 | 0.0681349 | FALSE | 0.5228326 | FALSE | SLC16A1 | NM_001166496 NM_003051 NP_001159968 NP_003042 | downstream | downstream | 135598 | NA | NA | NA | 5 | NA |
|
44215 | 15417 | 0.37 | FALSE |
| 205 | chr13 | 43446228 | 43446507 | 280 |
|
29.65144 | 8302.403 | 2784417 | 2784696 | 5 | 6717 | 2420.129 | 7.645741e+03 | 9.428571e-01 | 4.453812e+03 | 0.000000e+00 | 1.482143e-01 | -1.298533e+01 | -7.796155e-01 | -1.000000e+100 | -1.565468e+01 | 0.0686019 | FALSE | 0.5228326 | FALSE | EPSTI1 | NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959 | downstream | downstream | 119900 | NA | NA | NA | 13 | NA |
|
105883 | 103915 | 0.37 | FALSE |
| 206 | chrX | 113836281 | 113836505 | 225 |
|
36.89764 | 8301.968 | 9203379 | 9203603 | 25 | 4367 | 4965.352 | 1.778489e+04 | 1.466889e+01 | 7.026753e+03 | 0.000000e+00 | 4.488889e-01 | -1.024368e+01 | -1.339722e+00 | -1.000000e+100 | -1.527393e+01 | 0.0686019 | FALSE | 0.5228326 | FALSE | HTR2C | NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690 | inside intron | inside | 17730 | inside intron | 11768 | 2 | 7 | 5' UTR |
|
326073 | 180632 | 0.37 | FALSE |
| 207 | chr6 | 31132905 | 31133063 | 159 |
|
52.19864 | 8299.584 | 3900308 | 3900466 | 9 | 1641 | 21538.189 | 4.450317e+04 | 6.999057e+01 | 6.309882e+04 | 1.773585e+00 | 1.718868e+01 | -9.312532e+00 | 5.037051e-01 | -1.461495e+01 | -1.133823e+01 | 0.0686019 | FALSE | 0.5228326 | FALSE | POU5F1 | NM_001173531 NM_001285986 NM_001285987 NM_002701 NM_203289 NP_001167002 NP_001272915 NP_001272916 NP_002692 NP_976034 | inside exon | inside | 5388 | inside exon | 0 | 4 | 5 | inside transcription region |
|
6337 | 6019 | 0.37 | FALSE |
| 208 | chr5 | 12665719 | 12665992 | 274 |
|
30.22452 | 8281.519 | 1280575 | 1280848 | 7 | 4264 | 3030.256 | 8.408047e+03 | 1.319343e+01 | 6.720814e+03 | 1.350365e+00 | 7.875912e+00 | -9.315807e+00 | -3.231349e-01 | -1.260421e+01 | -1.006011e+01 | 0.0686797 | FALSE | 0.5228326 | FALSE | LINC01194 | NR_033383 | NA | NA | 0 | NA | NA | NA | 3 | NA |
|
0 | 0 | 0.37 | FALSE |
| 209 | chr5 | 126176936 | 126177252 | 317 |
|
26.09906 | 8273.401 | 11958133 | 11958449 | 23 | 5984 | 1841.655 | 7.403121e+03 | 5.520500e-02 | 1.804434e+03 | 0.000000e+00 | 6.640379e-01 | -1.703297e+01 | -2.036587e+00 | -1.000000e+100 | -1.344458e+01 | 0.0687575 | FALSE | 0.5228326 | FALSE | LMNB1 | NM_001198557 NM_005573 NP_001185486 NP_005564 | downstream | downstream | 64621 | NA | NA | NA | 11 | NA |
|
60397 | 58755 | 0.37 | FALSE |
| 210 | chr2 | 217538023 | 217538319 | 297 |
|
27.76193 | 8245.293 | 23438970 | 23439266 | 55 | 6953 | 7724.775 | 9.464310e+01 | 1.231872e+04 | 1.190909e+01 | 1.513310e+04 | 1.106551e+04 | 7.024139e+00 | -2.990434e+00 | 7.320995e+00 | 6.869357e+00 | 0.0693023 | FALSE | 0.5228326 | FALSE | IGFBP5 | NM_000599 NP_000590 | inside exon | inside | 21953 | inside exon | 0 | 4 | 4 | 3'UTR |
|
23444 | 18024 | 0.37 | FALSE |
| 211 | chr1 | 226413721 | 226414041 | 321 |
|
25.58215 | 8211.870 | 29406340 | 29406660 | 42 | 1568 | 4450.195 | 3.677414e+01 | 4.597819e+01 | 2.216110e+04 | 3.728972e+00 | 3.398754e+00 | 3.222580e-01 | 9.235122e+00 | -3.301842e+00 | -3.435614e+00 | 0.0697693 | FALSE | 0.5228326 | FALSE | MIXL1 | NM_001282402 NM_031944 NP_001269331 NP_114150 | close to 3' | close to 3' | 2338 | NA | NA | NA | 2 | NA |
|
2130 | 2130 | 0.37 | FALSE |
| 212 | chr12 | 14859430 | 14859723 | 294 |
|
27.61399 | 8118.514 | 2902452 | 2902745 | 11 | 5086 | 2362.565 | 6.942406e+03 | 1.914966e+00 | 4.862403e+03 | 5.756803e+00 | 3.418367e-01 | -1.182390e+01 | -5.137663e-01 | -1.023595e+01 | -1.430984e+01 | 0.0708588 | FALSE | 0.5228326 | FALSE | GUCY2C | NM_004963 NP_004954 | upstream | upstream | 9911 | NA | NA | NA | 27 | NA |
|
83951 | 83331 | 0.37 | FALSE |
| 213 | chr6 | 21362489 | 21362739 | 251 |
|
31.93808 | 8016.457 | 2102224 | 2102474 | 8 | 4726 | 3493.452 | 1.284376e+04 | 1.180876e+01 | 4.606683e+03 | 1.408367e+00 | 3.601594e+00 | -1.008699e+01 | -1.479267e+00 | -1.315476e+01 | -1.180014e+01 | 0.0719483 | FALSE | 0.5228326 | FALSE | CDKAL1 | NM_017774 NP_060244 XM_006715127 XM_006715128 XP_006715190 XP_006715191 | downstream | downstream | 827801 | NA | NA | NA | 16 | NA |
|
697946 | 684688 | 0.37 | FALSE |
| 214 | chr5 | 107889986 | 107890205 | 220 |
|
36.40159 | 8008.350 | 10351842 | 10352061 | 18 | 2567 | 7760.347 | 2.006359e+04 | 7.490682e+01 | 1.863718e+04 | 1.099091e+01 | 1.507045e+01 | -8.065267e+00 | -1.063965e-01 | -1.083405e+01 | -1.037864e+01 | 0.0720261 | FALSE | 0.5228326 | FALSE | FBXL17 | NM_001163315 NM_022824 NP_001156787 XM_005272048 XM_005272050 XP_005272105 XP_005272107 XR_427717 | upstream | upstream | 172187 | NA | NA | NA | 9 | NA |
|
523065 | 519971 | 0.37 | FALSE |
| 215 | chr3 | 115513104 | 115513358 | 255 |
|
31.39695 | 8006.223 | 11064308 | 11064562 | 21 | 5485 | 3230.134 | 1.148074e+04 | 6.488235e+00 | 4.658957e+03 | 7.921569e-01 | 3.692157e+00 | -1.078910e+01 | -1.301137e+00 | -1.382307e+01 | -1.160246e+01 | 0.0721040 | FALSE | 0.5228326 | FALSE | LSAMP | NM_002338 NP_002329 XM_005247454 XM_006713638 XP_005247511 XP_006713701 | downstream | downstream | 651027 | NA | NA | NA | 7 | NA |
|
643175 | 634714 | 0.37 | FALSE |
| 216 | chr20 | 12323179 | 12323389 | 211 |
|
37.75472 | 7966.246 | 1420784 | 1420994 | 2 | 4153 | 5855.428 | 2.237594e+04 | 5.026066e+00 | 6.891945e+03 | 9.004739e-01 | 3.327014e+00 | -1.212023e+01 | -1.698965e+00 | -1.460090e+01 | -1.271543e+01 | 0.0725709 | FALSE | 0.5228326 | FALSE | BTBD3 | NM_001282550 NM_001282551 NM_001282552 NM_001282554 NM_014962 NM_181443 NP_001269479 NP_001269480 NP_001269481 NP_001269483 NP_055777 NP_852108 XM_006723550 XM_006723551 XP_006723613 XP_006723614 | downstream | downstream | 451702 | NA | NA | NA | 5 | NA |
|
35766 | 5207 | 0.37 | FALSE |
| 217 | chr2 | 216790408 | 216790688 | 281 |
|
28.25847 | 7940.629 | 23212931 | 23213211 | 54 | 5522 | 2840.089 | 9.762528e+03 | 9.390747e+01 | 4.337651e+03 | 3.542705e+00 | 2.814947e+00 | -6.699871e+00 | -1.170341e+00 | -1.142819e+01 | -1.175993e+01 | 0.0728822 | FALSE | 0.5228326 | FALSE | MREG | NM_018000 NP_060470 | downstream | downstream | 87658 | NA | NA | NA | 5 | NA |
|
71032 | 68464 | 0.37 | FALSE |
| 218 | chr9 | 99981566 | 99981792 | 227 |
|
34.75307 | 7888.946 | 9819334 | 9819560 | 16 | 5375 | 4743.908 | 1.677604e+04 | 1.389868e+01 | 6.923960e+03 | 2.002203e+00 | 3.640969e+00 | -1.023724e+01 | -1.276733e+00 | -1.303253e+01 | -1.216979e+01 | 0.0738161 | FALSE | 0.5228326 | FALSE | LOC100499484 | NR_036526 | NA | NA | 0 | NA | NA | NA | 16 | NA |
|
0 | 0 | 0.37 | FALSE |
| 219 | chr15 | 78640269 | 78640559 | 291 |
|
27.08837 | 7882.716 | 8536201 | 8536491 | 7 | 291 | 11608.532 | 5.936156e+03 | 2.161340e+01 | 6.673309e+03 | 5.171821e-01 | 4.541107e+04 | -8.101459e+00 | 1.688733e-01 | -1.348657e+01 | 2.935443e+00 | 0.0740496 | FALSE | 0.5228326 | FALSE | CRABP1 | NM_004378 NP_004369 | inside exon | inside | 7603 | inside exon | 0 | 4 | 4 | overlaps 3'UTR |
|
7906 | 7548 | 0.37 | FALSE |
| 220 | chr15 | 97416911 | 97417115 | 205 |
|
38.31219 | 7853.999 | 11244637 | 11244841 | 14 | 4991 | 7432.581 | 1.567696e+04 | 8.610488e+01 | 2.139984e+04 | 0.000000e+00 | 0.000000e+00 | -7.508335e+00 | 4.489548e-01 | -1.000000e+100 | -1.000000e+100 | 0.0742052 | FALSE | 0.5228326 | FALSE | SPATA8 | NM_173499 NP_775770 | downstream | downstream | 90232 | NA | NA | NA | 3 | NA |
|
2166 | 1461 | 0.37 | FALSE |
| 221 | chr8 | 98216307 | 98216524 | 218 |
|
36.00548 | 7849.195 | 9556990 | 9557207 | 21 | 3640 | 5486.013 | 2.011140e+04 | 8.509174e+00 | 7.299796e+03 | 2.793578e+00 | 7.564220e+00 | -1.120671e+01 | -1.462086e+00 | -1.281361e+01 | -1.137653e+01 | 0.0742830 | FALSE | 0.5228326 | FALSE | CPQ | NM_016134 NP_057218 XM_005250755 XM_006716498 XP_005250812 XP_006716561 XR_428374 | downstream | downstream | 558808 | NA | NA | NA | 8 | NA |
|
498223 | 358285 | 0.37 | FALSE |
| 222 | chr7 | 120958823 | 120959023 | 201 |
|
38.91912 | 7822.743 | 13743739 | 13743939 | 19 | 3029 | 7246.172 | 2.710580e+04 | 2.347015e+01 | 9.098590e+03 | 2.057214e+00 | 9.427861e-01 | -1.017356e+01 | -1.574887e+00 | -1.368562e+01 | -1.481131e+01 | 0.0744387 | FALSE | 0.5228326 | FALSE | WNT16 | NM_016087 NM_057168 NP_057171 NP_476509 | upstream | upstream | 6398 | NA | NA | NA | 4 | NA |
|
15737 | 13929 | 0.37 | FALSE |
| 223 | chrX | 113701497 | 113701741 | 245 |
|
31.81697 | 7795.159 | 9174442 | 9174686 | 24 | 5710 | 3091.773 | 1.179843e+04 | 1.218367e+00 | 3.659053e+03 | 0.000000e+00 | 1.612245e-01 | -1.324136e+01 | -1.689053e+00 | -1.000000e+100 | -1.615916e+01 | 0.0751391 | FALSE | 0.5228326 | FALSE | HTR2C | NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690 | upstream | upstream | 116810 | NA | NA | NA | 6 | NA |
|
326073 | 180632 | 0.37 | FALSE |
| 224 | chr8 | 115308506 | 115308756 | 251 |
|
30.97772 | 7775.408 | 10978513 | 10978763 | 27 | 1886 | 2943.870 | 1.216366e+04 | 2.011952e-01 | 2.555492e+03 | 0.000000e+00 | 0.000000e+00 | -1.588362e+01 | -2.250904e+00 | -1.000000e+100 | -1.000000e+100 | 0.0753726 | FALSE | 0.5228326 | FALSE | CSMD3 | NM_052900 NM_198123 NM_198124 NP_443132 NP_937756 NP_937757 | upstream | upstream | 859264 | NA | NA | NA | 71 | NA |
|
1214083 | 1212083 | 0.37 | FALSE |
| 225 | chr4 | 88843325 | 88843546 | 222 |
|
34.85863 | 7738.617 | 8277866 | 8278087 | 18 | 5462 | 4410.020 | 1.363192e+04 | 3.794369e+01 | 8.380005e+03 | 2.297297e-01 | 0.000000e+00 | -8.488913e+00 | -7.019660e-01 | -1.585669e+01 | -1.000000e+100 | 0.0760730 | FALSE | 0.5228326 | FALSE | SPP1 | NM_000582 NM_001040058 NM_001040060 NM_001251829 NM_001251830 NP_000573 NP_001035147 NP_001035149 NP_001238758 NP_001238759 | upstream | upstream | 53256 | NA | NA | NA | 7 | NA |
|
7761 | 6000 | 0.37 | FALSE |
| 226 | chr5 | 12664633 | 12664851 | 219 |
|
35.07567 | 7681.571 | 1279489 | 1279707 | 7 | 4264 | 4799.825 | 1.315305e+04 | 3.839041e+01 | 1.080657e+04 | 8.904110e-01 | 2.305936e-01 | -8.420435e+00 | -2.834887e-01 | -1.385057e+01 | -1.579968e+01 | 0.0766956 | FALSE | 0.5228326 | FALSE | LINC01194 | NR_033383 | NA | NA | 0 | NA | NA | NA | 3 | NA |
|
0 | 0 | 0.37 | FALSE |
| 227 | chr3 | 54668488 | 54668704 | 217 |
|
35.25594 | 7650.539 | 7021729 | 7021945 | 12 | 7966 | 4765.505 | 1.482357e+04 | 5.944700e+00 | 8.997862e+03 | 0.000000e+00 | 1.451613e-01 | -1.128400e+01 | -7.202392e-01 | -1.000000e+100 | -1.663988e+01 | 0.0770847 | FALSE | 0.5228326 | FALSE | ESRG | NR_027122 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.37 | FALSE |
| 228 | chr10 | 53797222 | 53797512 | 291 |
|
26.23934 | 7635.647 | 5494842 | 5495132 | 7 | 5594 | 1767.964 | 6.131737e+03 | 2.079038e+00 | 2.706005e+03 | 0.000000e+00 | 0.000000e+00 | -1.152616e+01 | -1.180131e+00 | -1.000000e+100 | -1.000000e+100 | 0.0773960 | FALSE | 0.5228326 | FALSE | PRKG1 | NM_001098512 NM_006258 NP_001091982 NP_006249 XM_005269970 XM_005269971 XM_005269972 XP_005270027 XP_005270028 XP_005270029 | inside intron | inside | 962988 | inside intron | 16732 | 6 | 18 | inside transcription region |
|
1223876 | 1219309 | 0.37 | FALSE |
| 229 | chr3 | 98115654 | 98115897 | 244 |
|
31.26662 | 7629.054 | 9327743 | 9327986 | 17 | 244 | 3180.016 | 9.699439e+03 | 1.954508e+01 | 6.180268e+03 | 4.918033e-01 | 3.360656e-01 | -8.954952e+00 | -6.502317e-01 | -1.426753e+01 | -1.481687e+01 | 0.0773960 | FALSE | 0.5228326 | FALSE | OR5K3 | NM_001005516 NP_001005516 | downstream | downstream | 6144 | NA | NA | NA | 1 | NA |
|
965 | 965 | 0.37 | FALSE |
| 230 | chr2 | 67562519 | 67562819 | 301 |
|
25.30012 | 7615.335 | 7287331 | 7287631 | 17 | 8129 | 1918.979 | 8.976148e+03 | 0.000000e+00 | 6.171312e+02 | 1.616279e+00 | 0.000000e+00 | -1.000000e+100 | -3.862447e+00 | -1.243920e+01 | -1.000000e+100 | 0.0779408 | FALSE | 0.5228326 | FALSE | ETAA1 | NM_019002 NP_061875 XM_005264374 XM_005264375 XM_005264376 XM_005264377 XM_005264378 XP_005264431 XP_005264432 XP_005264433 XP_005264434 XP_005264435 | upstream | upstream | 61623 | NA | NA | NA | 6 | NA |
|
13091 | 12589 | 0.37 | FALSE |
| 231 | chr1 | 231967939 | 231968127 | 189 |
|
40.15767 | 7589.800 | 30376105 | 30376293 | 47 | 904 | 7797.052 | 2.854665e+04 | 2.658466e+01 | 1.040302e+04 | 1.896825e+00 | 7.119048e+00 | -1.006851e+01 | -1.456319e+00 | -1.387745e+01 | -1.196935e+01 | 0.0782521 | FALSE | 0.5228326 | FALSE | DISC1 | NM_001012957 NM_001012958 NM_001012959 NM_001039383 NM_001164537 NM_001164538 NM_001164539 NM_001164540 NM_001164541 NM_001164542 NM_001164544 NM_001164545 NM_001164546 NM_001164547 NM_001164548 NM_001164549 NM_001164550 NM_001164551 NM_001164552 NM_001164553 NM_001164554 NM_001164555 NM_001164556 NM_018662 NP_001012975 NP_001012976 NP_001012977 NP_001158009 NP_001158010 NP_001158011 NP_001158012 NP_001158013 NP_001158014 NP_001158016 NP_001158017 NP_001158018 NP_001158019 NP_001158020 NP_001158021 NP_001158022 NP_001158023 NP_001158024 NP_001158025 NP_001158026 NP_001158027 NP_001158028 NP_061132 | inside intron | inside | 205378 | inside intron | -13676 | 7 | 11 | inside transcription region |
|
414458 | 409963 | 0.37 | FALSE |
| 232 | chr12 | 79938637 | 79938832 | 196 |
|
38.54134 | 7554.102 | 10242610 | 10242805 | 22 | 5631 | 6468.906 | 2.148027e+04 | 3.980357e+01 | 1.082193e+04 | 2.576531e-01 | 2.270408e+00 | -9.075899e+00 | -9.890549e-01 | -1.634722e+01 | -1.320777e+01 | 0.0791081 | FALSE | 0.5228326 | FALSE | PAWR | NM_002583 NP_002574 XM_006719435 XM_006719436 XP_006719498 XP_006719499 | downstream | downstream | 145958 | NA | NA | NA | 7 | NA |
|
99045 | 97637 | 0.37 | FALSE |
| 233 | chr20 | 36758105 | 36758386 | 282 |
|
26.64619 | 7514.225 | 4128822 | 4129103 | 5 | 1818 | 6813.113 | 1.472518e+01 | 1.045410e+04 | 1.493440e+01 | 2.355679e+04 | 2.501064e+01 | 9.471569e+00 | 2.035400e-02 | 1.064364e+01 | 7.642569e-01 | 0.0796529 | FALSE | 0.5228326 | FALSE | TGM2 | NM_004613 NM_198951 NP_004604 NP_945189 | inside exon | inside | 35314 | inside exon | 0 | 12 | 12 | 3'UTR |
|
36836 | 34979 | 0.37 | FALSE |
| 234 | chrX | 110790954 | 110791195 | 242 |
|
30.83038 | 7460.951 | 8810380 | 8810621 | 22 | 4520 | 2892.391 | 1.062599e+04 | 3.743802e+00 | 3.830085e+03 | 3.925620e-01 | 1.741736e+00 | -1.147081e+01 | -1.472150e+00 | -1.472432e+01 | -1.257478e+01 | 0.0801198 | FALSE | 0.5228326 | FALSE | LINC00890 | NR_033974 | NA | NA | 0 | NA | NA | NA | 3 | NA |
|
0 | 0 | 0.37 | FALSE |
| 235 | chr4 | 24505768 | 24506007 | 240 |
|
30.96204 | 7430.891 | 3125098 | 3125337 | 9 | 1356 | 3175.939 | 1.169215e+04 | 1.931458e+01 | 4.165494e+03 | 2.104167e-01 | 2.527083e+00 | -9.241634e+00 | -1.488981e+00 | -1.576193e+01 | -1.217578e+01 | 0.0806646 | FALSE | 0.5228326 | FALSE | MIR573 | NR_030299 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.37 | FALSE |
| 236 | chr12 | 10489821 | 10490039 | 219 |
|
33.89933 | 7423.954 | 2153162 | 2153380 | 7 | 3160 | 4281.666 | 1.343127e+04 | 4.100457e+00 | 7.963740e+03 | 0.000000e+00 | 9.223744e+00 | -1.167752e+01 | -7.540774e-01 | -1.000000e+100 | -1.050796e+01 | 0.0807424 | FALSE | 0.5228326 | FALSE | KLRD1 | NM_001114396 NM_002262 NM_007334 NP_001107868 NP_002253 NP_031360 XM_005253363 XM_006719065 XM_006719066 XM_006719067 XM_006719068 XP_005253420 XP_006719128 XP_006719129 XP_006719130 XP_006719131 | downstream | downstream | 32771 | NA | NA | NA | 7 | NA |
|
12800 | 6715 | 0.37 | FALSE |
| 237 | chr4 | 79637334 | 79637547 | 214 |
|
34.63061 | 7410.951 | 7319107 | 7319320 | 15 | 3968 | 4995.028 | 1.801615e+04 | 8.852804e+00 | 6.940271e+03 | 1.976635e+00 | 7.883178e+00 | -1.099087e+01 | -1.376227e+00 | -1.315396e+01 | -1.115823e+01 | 0.0808203 | FALSE | 0.5228326 | FALSE | LINC01094 | NR_038303 NR_038304 NR_038305 NR_038306 NR_038307 NR_038308 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.37 | FALSE |
| 238 | chr8 | 115307736 | 115307988 | 253 |
|
29.26377 | 7403.734 | 10977743 | 10977995 | 27 | 1886 | 2448.929 | 9.950267e+03 | 0.000000e+00 | 2.294377e+03 | 0.000000e+00 | 0.000000e+00 | -1.000000e+100 | -2.116632e+00 | -1.000000e+100 | -1.000000e+100 | 0.0808203 | FALSE | 0.5228326 | FALSE | CSMD3 | NM_052900 NM_198123 NM_198124 NP_443132 NP_937756 NP_937757 | upstream | upstream | 858494 | NA | NA | NA | 71 | NA |
|
1214083 | 1212083 | 0.37 | FALSE |
| 239 | chr2 | 76800884 | 76801101 | 218 |
|
33.94134 | 7399.213 | 8866468 | 8866685 | 20 | 4047 | 4086.634 | 1.295281e+04 | 2.900688e+01 | 7.450087e+03 | 3.830275e-01 | 8.853211e-01 | -8.802654e+00 | -7.979356e-01 | -1.504546e+01 | -1.383670e+01 | 0.0809759 | FALSE | 0.5228326 | FALSE | LRRTM4 | NM_001134745 NM_001282924 NM_001282928 NM_024993 NP_001128217 NP_001269853 NP_001269857 NP_079269 | downstream | downstream | 948401 | NA | NA | NA | 4 | NA |
|
774652 | 772976 | 0.37 | FALSE |
| 240 | chr6 | 121944505 | 121944749 | 245 |
|
30.18354 | 7394.967 | 13049963 | 13050207 | 26 | 2940 | 3431.521 | 1.066780e+04 | 1.430612e+01 | 6.456935e+03 | 6.730612e+00 | 1.182857e+01 | -9.542415e+00 | -7.243419e-01 | -1.063024e+01 | -9.816772e+00 | 0.0810537 | FALSE | 0.5228326 | FALSE | GJA1 | NM_000165 NP_000156 | downstream | downstream | 187760 | NA | NA | NA | 2 | NA |
|
14128 | 1148 | 0.37 | FALSE |
| 241 | chr4 | 80477466 | 80477672 | 207 |
|
35.71306 | 7392.604 | 7391469 | 7391675 | 16 | 2580 | 4947.571 | 1.843585e+04 | 1.209662e+01 | 6.284150e+03 | 2.091787e+00 | 3.664251e+00 | -1.057369e+01 | -1.552725e+00 | -1.310549e+01 | -1.229671e+01 | 0.0811316 | FALSE | 0.5228326 | FALSE | LINC00989 | NR_038826 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.37 | FALSE |
| 242 | chrX | 124523605 | 124523869 | 265 |
|
27.89268 | 7391.561 | 10071756 | 10072020 | 30 | 5372 | 2095.298 | 5.991328e+03 | 1.128302e+00 | 4.484034e+03 | 0.000000e+00 | 0.000000e+00 | -1.237451e+01 | -4.180787e-01 | -1.000000e+100 | -1.000000e+100 | 0.0811316 | FALSE | 0.5228326 | FALSE | LOC100129520 | NM_001195272 NP_001182201 XM_005262352 XP_005262409 | downstream | downstream | 69636 | NA | NA | NA | 1 | NA |
|
2981 | 2981 | 0.37 | FALSE |
| 243 | chr19 | 54335412 | 54335675 | 264 |
|
27.97005 | 7384.093 | 14736638 | 14736901 | 10 | 5816 | 2353.672 | 9.354430e+03 | 1.684659e+01 | 2.397085e+03 | 0.000000e+00 | 0.000000e+00 | -9.117049e+00 | -1.964368e+00 | -1.000000e+100 | -1.000000e+100 | 0.0812872 | FALSE | 0.5228326 | FALSE | NLRP12 | NM_001277126 NM_001277129 NM_033297 NM_144687 NP_001264055 NP_001264058 NP_653288 | upstream | upstream | 7755 | NA | NA | NA | 10 | NA |
|
30802 | 30125 | 0.37 | FALSE |
| 244 | chr13 | 54844096 | 54844285 | 190 |
|
38.70708 | 7354.345 | 4372338 | 4372527 | 10 | 2340 | 6123.505 | 1.760921e+04 | 6.031579e+00 | 1.299867e+04 | 1.328947e+00 | 2.286842e+00 | -1.151151e+01 | -4.379657e-01 | -1.369376e+01 | -1.291069e+01 | 0.0815207 | FALSE | 0.5228326 | FALSE | MIR1297 | NR_031628 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.37 | FALSE |
| 245 | chr9 | 93177564 | 93177767 | 204 |
|
36.01644 | 7347.353 | 8539777 | 8539980 | 13 | 5274 | 4599.017 | 1.663615e+04 | 3.171569e+00 | 6.355765e+03 | 0.000000e+00 | 0.000000e+00 | -1.235684e+01 | -1.388184e+00 | -1.000000e+100 | -1.000000e+100 | 0.0816763 | FALSE | 0.5228326 | FALSE | RP11-555F9.2 | NM_001105317 NR_034157 | downstream | downstream | 167261 | NA | NA | NA | 6 | NA |
|
120314 | 42211 | 0.37 | FALSE |
| 246 | chr8 | 120122038 | 120122310 | 273 |
|
26.89892 | 7343.405 | 11214800 | 11215072 | 32 | 10012 | 1997.872 | 1.144689e+00 | 0.000000e+00 | 4.798535e-01 | 9.986328e+03 | 1.406593e+00 | -1.000000e+100 | -1.254289e+00 | 1.309078e+01 | 2.972501e-01 | 0.0817542 | FALSE | 0.5228326 | FALSE | COLEC10 | NM_006438 NP_006429 XM_005250756 XP_005250813 | downstream | downstream | 42614 | NA | NA | NA | 6 | NA |
|
39778 | 38909 | 0.37 | FALSE |
| 247 | chrX | 93954801 | 93955028 | 228 |
|
32.16157 | 7332.837 | 7074693 | 7074920 | 16 | 5905 | 3280.539 | 1.149912e+04 | 1.982456e+00 | 4.899654e+03 | 1.644737e-01 | 1.774123e+00 | -1.250195e+01 | -1.230772e+00 | -1.609331e+01 | -1.266213e+01 | 0.0819876 | FALSE | 0.5228326 | FALSE | FAM133A | NM_001171109 NM_001171110 NM_001171111 NM_173698 NP_001164580 NP_001164581 NP_001164582 NP_775969 XM_006724641 XP_006724704 | downstream | downstream | 1025789 | NA | NA | NA | 4 | NA |
|
38261 | 746 | 0.37 | FALSE |
| 248 | chr9 | 76704283 | 76704525 | 243 |
|
30.04531 | 7301.010 | 7025263 | 7025505 | 5 | 5530 | 2911.704 | 8.219626e+03 | 2.756173e+01 | 6.310918e+03 | 0.000000e+00 | 4.156379e-01 | -8.220263e+00 | -3.812229e-01 | -1.000000e+100 | -1.427146e+01 | 0.0822211 | FALSE | 0.5228326 | FALSE | RORB | NM_006914 NP_008845 | upstream | upstream | 407727 | NA | NA | NA | 10 | NA |
|
189865 | 187641 | 0.37 | FALSE |
| 249 | chr4 | 62632632 | 62632867 | 236 |
|
30.84561 | 7279.563 | 5878286 | 5878521 | 13 | 5422 | 2877.176 | 1.029293e+04 | 3.368644e+00 | 4.086803e+03 | 0.000000e+00 | 2.781780e+00 | -1.157720e+01 | -1.332609e+00 | -1.000000e+100 | -1.185336e+01 | 0.0827659 | FALSE | 0.5228326 | FALSE | LPHN3 | NM_015236 NP_056051 XM_006714153 XM_006714154 XM_006714155 XM_006714156 XP_006714216 XP_006714217 XP_006714218 XP_006714219 | inside intron | inside | 34160 | inside intron | -33360 | 1 | 6 | inside transcription region |
|
202269 | 202149 | 0.37 | FALSE |
| 250 | chr1 | 222146939 | 222147146 | 208 |
|
34.81839 | 7242.225 | 28569744 | 28569951 | 39 | 8614 | 7348.296 | 2.158256e+04 | 5.972596e+01 | 1.505823e+04 | 1.569231e+01 | 2.527885e+01 | -8.497292e+00 | -5.193140e-01 | -1.042559e+01 | -9.737720e+00 | 0.0833885 | FALSE | 0.5228326 | FALSE | DUSP10 | NM_007207 NM_144728 NM_144729 NP_009138 NP_653329 NP_653330 | upstream | upstream | 231423 | NA | NA | NA | 4 | NA |
|
40752 | 37332 | 0.37 | FALSE |
| 251 | chr9 | 90031239 | 90031497 | 259 |
|
27.94101 | 7236.723 | 8216956 | 8217214 | 12 | 5446 | 2352.681 | 6.822077e+03 | 7.598456e+00 | 4.929710e+03 | 2.277992e-01 | 3.791506e+00 | -9.810289e+00 | -4.687082e-01 | -1.487016e+01 | -1.081322e+01 | 0.0834663 | FALSE | 0.5228326 | FALSE | DAPK1 | NM_001288729 NM_001288730 NM_001288731 NM_004938 NP_001275658 NP_001275659 NP_001275660 NP_004929 XM_005251757 XM_006716988 XP_005251814 XP_006717051 | upstream | upstream | 81161 | NA | NA | NA | 26 | NA |
|
210891 | 208286 | 0.37 | FALSE |
| 252 | chr4 | 1165640 | 1165862 | 223 |
|
32.43322 | 7232.608 | 494612 | 494834 | 1 | 5842 | 9533.140 | 3.475336e+01 | 1.810202e+02 | 2.318386e+00 | 4.736894e+04 | 7.866816e+01 | 2.380926e+00 | -3.905960e+00 | 1.041257e+01 | 1.178627e+00 | 0.0835441 | FALSE | 0.5228326 | FALSE | SPON2 | NM_001128325 NM_001199021 NM_012445 NP_001121797 NP_001185950 NP_036577 | inside exon | inside | 36888 | inside exon | 0 | 4 | 8 | overlaps 5' UTR |
|
42029 | 4599 | 0.37 | FALSE |
| 253 | chr9 | 96112260 | 96112501 | 242 |
|
29.81481 | 7215.183 | 8987494 | 8987735 | 14 | 5407 | 2551.674 | 9.363709e+03 | 4.173554e-01 | 3.394244e+03 | 0.000000e+00 | 0.000000e+00 | -1.445352e+01 | -1.463990e+00 | -1.000000e+100 | -1.000000e+100 | 0.0839332 | FALSE | 0.5228326 | FALSE | C9orf129 | NM_001098808 NP_001092278 XM_006717117 XP_006717180 | upstream | upstream | 3564 | NA | NA | NA | 5 | NA |
|
28215 | 17555 | 0.37 | FALSE |
| 254 | chr13 | 66802303 | 66802540 | 238 |
|
30.29890 | 7211.138 | 4792562 | 4792799 | 18 | 4101 | 2902.363 | 8.616082e+03 | 2.440546e+01 | 5.870216e+03 | 1.617647e-01 | 9.474790e-01 | -8.463684e+00 | -5.536183e-01 | -1.570085e+01 | -1.315065e+01 | 0.0840111 | FALSE | 0.5228326 | FALSE | PCDH9 | NM_020403 NM_203487 NP_065136 NP_982354 XM_005266406 XM_005266407 XM_005266408 XP_005266463 XP_005266464 XP_005266465 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.37 | FALSE |
| 255 | chrX | 97779864 | 97780069 | 206 |
|
34.98567 | 7207.048 | 7294932 | 7295137 | 19 | 4431 | 4386.265 | 1.629010e+04 | 1.618932e+00 | 5.637638e+03 | 2.014563e-01 | 1.759709e+00 | -1.329667e+01 | -1.530833e+00 | -1.630317e+01 | -1.317637e+01 | 0.0840111 | FALSE | 0.5228326 | FALSE | DIAPH2 | NM_006729 NM_007309 NP_006720 NP_009293 | downstream | downstream | 1840202 | NA | NA | NA | 27 | NA |
|
915935 | 914258 | 0.37 | FALSE |
| 256 | chr2 | 77324835 | 77325079 | 245 |
|
29.38297 | 7198.827 | 8912388 | 8912632 | 22 | 2098 | 2742.942 | 1.147011e+04 | 1.012449e+01 | 2.232378e+03 | 0.000000e+00 | 2.102041e+00 | -1.014581e+01 | -2.361226e+00 | -1.000000e+100 | -1.241380e+01 | 0.0841667 | FALSE | 0.5228326 | FALSE | LRRTM4 | NM_001134745 NM_001282924 NM_001282928 NM_024993 NP_001128217 NP_001269853 NP_001269857 NP_079269 | inside intron | inside | 424423 | inside intron | 348793 | 4 | 4 | inside transcription region |
|
774652 | 772976 | 0.37 | FALSE |
| 257 | chr12 | 86272123 | 86272347 | 225 |
|
31.85983 | 7168.462 | 10641366 | 10641590 | 24 | 4217 | 5780.449 | 7.360873e+03 | 5.539778e+01 | 2.146773e+04 | 0.000000e+00 | 1.824444e+01 | -7.053905e+00 | 1.544221e+00 | -1.000000e+100 | -8.656276e+00 | 0.0847893 | FALSE | 0.5228326 | FALSE | NTS | NM_006183 NP_006174 | inside exon | inside | 4050 | inside exon | 0 | 3 | 4 | inside transcription region |
|
8697 | 7971 | 0.37 | FALSE |
| 258 | chr4 | 88846274 | 88846448 | 175 |
|
40.90325 | 7158.068 | 8280815 | 8280989 | 18 | 5462 | 8001.927 | 3.028034e+04 | 3.063143e+01 | 9.698086e+03 | 2.885714e-01 | 2.885714e-01 | -9.949153e+00 | -1.642610e+00 | -1.667909e+01 | -1.667909e+01 | 0.0848671 | FALSE | 0.5228326 | FALSE | SPP1 | NM_000582 NM_001040058 NM_001040060 NM_001251829 NM_001251830 NP_000573 NP_001035147 NP_001035149 NP_001238758 NP_001238759 | upstream | upstream | 50354 | NA | NA | NA | 7 | NA |
|
7761 | 6000 | 0.37 | FALSE |
| 259 | chr9 | 126795175 | 126795439 | 265 |
|
26.95742 | 7143.716 | 12931788 | 12932052 | 23 | 537 | 3586.362 | 8.847170e+00 | 7.641509e+00 | 2.310000e+01 | 3.283019e-01 | 1.789189e+04 | -2.113584e-01 | 1.384605e+00 | -4.752121e+00 | 1.098180e+01 | 0.0849449 | FALSE | 0.5228326 | FALSE | LHX2 | NM_004789 NP_004780 XM_006717323 XP_006717386 | inside exon | inside | 21286 | inside exon | 0 | 5 | 5 | 3'UTR |
|
21553 | 20358 | 0.37 | FALSE |
| 260 | chr9 | 99977170 | 99977407 | 238 |
|
29.94196 | 7126.188 | 9814938 | 9815175 | 16 | 5375 | 2587.063 | 9.551189e+03 | 1.140756e+00 | 3.382874e+03 | 0.000000e+00 | 1.134454e-01 | -1.303147e+01 | -1.497431e+00 | -1.000000e+100 | -1.636139e+01 | 0.0851784 | FALSE | 0.5228326 | FALSE | LOC100499484 | NR_036526 | NA | NA | 0 | NA | NA | NA | 16 | NA |
|
0 | 0 | 0.37 | FALSE |
| 261 | chrX | 91360586 | 91360804 | 219 |
|
32.49699 | 7116.840 | 6907867 | 6908085 | 13 | 5524 | 3435.335 | 1.146998e+04 | 1.170320e+01 | 5.692162e+03 | 1.152968e+00 | 1.673516e+00 | -9.936745e+00 | -1.010814e+00 | -1.328022e+01 | -1.274269e+01 | 0.0855675 | FALSE | 0.5228326 | FALSE | PCDH11X | NM_001168360 NM_001168361 NM_001168362 NM_001168363 NM_014522 NM_032967 NM_032968 NM_032969 NP_001161832 NP_001161833 NP_001161834 NP_001161835 NP_055337 NP_116749 NP_116750 NP_116751 | inside intron | inside | 270126 | inside intron | 95570 | 3 | 7 | inside transcription region |
|
787768 | 632811 | 0.37 | FALSE |
| 262 | chr1 | 223201713 | 223201891 | 179 |
|
39.67926 | 7102.587 | 28750903 | 28751081 | 40 | 5414 | 7165.327 | 1.521217e+04 | 4.634078e+01 | 2.056812e+04 | 0.000000e+00 | 0.000000e+00 | -8.358728e+00 | 4.351841e-01 | -1.000000e+100 | -1.000000e+100 | 0.0858788 | FALSE | 0.5228326 | FALSE | DISP1 | NM_032890 NP_116279 XM_005273335 XM_005273336 XM_006711592 XM_006711593 XM_006711594 XM_006711595 XP_005273392 XP_005273393 XP_006711655 XP_006711656 XP_006711657 XP_006711658 | downstream | downstream | 213282 | NA | NA | NA | 10 | NA |
|
190906 | 63148 | 0.37 | FALSE |
| 263 | chr16 | 9767585 | 9767863 | 279 |
|
25.44638 | 7099.541 | 2221051 | 2221329 | 4 | 8636 | 2047.991 | 9.911339e+03 | 0.000000e+00 | 3.286147e+02 | 0.000000e+00 | 0.000000e+00 | -1.000000e+100 | -4.914611e+00 | -1.000000e+100 | -1.000000e+100 | 0.0859567 | FALSE | 0.5228326 | FALSE | GRIN2A | NM_000833 NM_001134407 NM_001134408 NP_000824 NP_001127879 NP_001127880 XM_005255267 XM_005255268 XP_005255324 XP_005255325 | downstream | downstream | 508400 | NA | NA | NA | 13 | NA |
|
428998 | 417262 | 0.37 | FALSE |
| 264 | chrX | 113840052 | 113840245 | 194 |
|
36.54454 | 7089.640 | 9207150 | 9207343 | 25 | 4367 | 4693.056 | 1.671687e+04 | 1.007732e+00 | 6.745608e+03 | 0.000000e+00 | 1.796392e+00 | -1.401790e+01 | -1.309284e+00 | -1.000000e+100 | -1.318391e+01 | 0.0860345 | FALSE | 0.5228326 | FALSE | HTR2C | NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690 | inside intron | inside | 21501 | inside intron | 8028 | 2 | 7 | 5' UTR |
|
326073 | 180632 | 0.37 | FALSE |
| 265 | chr2 | 189839126 | 189839294 | 169 |
|
41.89566 | 7080.366 | 20108647 | 20108815 | 40 | 169 | 19175.576 | 2.644970e+00 | 1.531324e+04 | 9.112426e-01 | 8.055997e+04 | 1.109468e+00 | 1.249924e+01 | -1.537344e+00 | 1.489452e+01 | -1.253384e+00 | 0.0860345 | FALSE | 0.5228326 | FALSE | COL3A1 | NM_000090 NP_000081 | inside exon | inside | 27 | inside exon | 0 | 1 | 51 | overlaps 5' UTR |
|
38373 | 37284 | 0.37 | FALSE |
| 266 | chr2 | 5146401 | 5146611 | 211 |
|
33.49665 | 7067.793 | 429033 | 429243 | 1 | 5646 | 4202.828 | 9.992178e+03 | 3.174882e+01 | 1.098957e+04 | 4.028436e-01 | 2.393365e-01 | -8.297953e+00 | 1.372643e-01 | -1.459829e+01 | -1.534947e+01 | 0.0861901 | FALSE | 0.5228326 | FALSE | AC022311.1 | NR_034134 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.37 | FALSE |
| 267 | chr4 | 95217310 | 95217530 | 221 |
|
31.80013 | 7027.829 | 9016819 | 9017039 | 28 | 3437 | 3996.669 | 1.083625e+04 | 2.501357e+01 | 9.103652e+03 | 1.454072e+01 | 3.884615e+00 | -8.758939e+00 | -2.513488e-01 | -9.541551e+00 | -1.144581e+01 | 0.0869684 | FALSE | 0.5228326 | FALSE | HPGDS | NM_014485 NP_055300 XM_005262932 XP_005262989 | downstream | downstream | 46497 | NA | NA | NA | 6 | NA |
|
44320 | 35149 | 0.37 | FALSE |
| 268 | chr2 | 154391810 | 154392033 | 224 |
|
31.37008 | 7026.899 | 16192901 | 16193124 | 27 | 224 | 3186.591 | 1.148920e+04 | 4.732143e+00 | 4.433190e+03 | 2.450893e+00 | 3.379464e+00 | -1.124550e+01 | -1.373862e+00 | -1.219468e+01 | -1.173120e+01 | 0.0869684 | FALSE | 0.5228326 | FALSE | RPRM | NM_019845 NP_062819 | upstream | upstream | 56488 | NA | NA | NA | 1 | NA |
|
1470 | 329 | 0.37 | FALSE |
| 269 | chrX | 115946912 | 115947103 | 192 |
|
36.59781 | 7026.779 | 9402465 | 9402656 | 26 | 5174 | 7926.279 | 2.466741e+04 | 4.769271e+01 | 1.488091e+04 | 1.443490e+01 | 2.094531e+01 | -9.014622e+00 | -7.291430e-01 | -1.073883e+01 | -1.020176e+01 | 0.0869684 | FALSE | 0.5228326 | FALSE | CT83 | NM_001017978 NP_001017978 | upstream | upstream | 352718 | NA | NA | NA | 2 | NA |
|
1341 | 1109 | 0.37 | FALSE |
| 270 | chr14 | 41985179 | 41985390 | 212 |
|
33.12859 | 7023.261 | 2401780 | 2401991 | 4 | 5702 | 4195.230 | 1.139762e+04 | 3.897406e+01 | 9.536646e+03 | 2.382075e-01 | 2.676887e+00 | -8.192002e+00 | -2.571781e-01 | -1.554615e+01 | -1.205589e+01 | 0.0869684 | FALSE | 0.5228326 | FALSE | LRFN5 | NM_152447 NP_689660 XM_005267369 XP_005267426 XR_429293 | upstream | upstream | 91374 | NA | NA | NA | 6 | NA |
|
296988 | 17549 | 0.37 | FALSE |
| 271 | chr6 | 132227655 | 132227860 | 206 |
|
33.98093 | 7000.072 | 13975058 | 13975263 | 41 | 4872 | 4119.336 | 1.573334e+04 | 1.274757e+01 | 4.848653e+03 | 2.451456e-01 | 1.691748e+00 | -1.026939e+01 | -1.698169e+00 | -1.596983e+01 | -1.318302e+01 | 0.0872797 | FALSE | 0.5228326 | FALSE | ENPP1 | NM_006208 NP_006199 XM_005267017 XP_005267074 | downstream | downstream | 98499 | NA | NA | NA | 25 | NA |
|
87139 | 82475 | 0.37 | FALSE |
| 272 | chr9 | 99980400 | 99980589 | 190 |
|
36.75697 | 6983.825 | 9818168 | 9818357 | 16 | 5375 | 5238.502 | 1.970031e+04 | 1.905263e+00 | 6.489832e+03 | 2.263158e-01 | 2.421053e-01 | -1.333594e+01 | -1.601965e+00 | -1.640952e+01 | -1.631222e+01 | 0.0875131 | FALSE | 0.5228326 | FALSE | LOC100499484 | NR_036526 | NA | NA | 0 | NA | NA | NA | 16 | NA |
|
0 | 0 | 0.37 | FALSE |
| 273 | chr16 | 60115984 | 60116153 | 170 |
|
41.04168 | 6977.086 | 7943451 | 7943620 | 8 | 2164 | 7966.714 | 2.992475e+04 | 2.481765e+01 | 9.883406e+03 | 5.941176e-01 | 0.000000e+00 | -1.023576e+01 | -1.598259e+00 | -1.562023e+01 | -1.000000e+100 | 0.0875910 | FALSE | 0.5228326 | FALSE | APOOP5 | NR_028471 | upstream | upstream | 326889 | NA | NA | NA | 1 | NA |
|
1050 | 308 | 0.37 | FALSE |
| 274 | chr1 | 99978235 | 99978446 | 212 |
|
32.87066 | 6968.580 | 14809011 | 14809222 | 24 | 3707 | 4033.441 | 1.388530e+04 | 1.210142e+01 | 6.257724e+03 | 1.667453e+00 | 1.041274e+01 | -1.016417e+01 | -1.149848e+00 | -1.302362e+01 | -1.038099e+01 | 0.0879801 | FALSE | 0.5228326 | FALSE | PALMD | NM_017734 NP_060204 | upstream | upstream | 132985 | NA | NA | NA | 8 | NA |
|
48666 | 47744 | 0.37 | FALSE |
| 275 | chr4 | 1166332 | 1166562 | 231 |
|
30.10904 | 6955.189 | 495304 | 495534 | 1 | 5842 | 6605.055 | 3.485281e+01 | 8.252597e+01 | 3.095238e+00 | 3.278645e+04 | 1.183528e+02 | 1.243573e+00 | -3.493153e+00 | 9.877609e+00 | 1.763747e+00 | 0.0882135 | FALSE | 0.5228326 | FALSE | SPON2 | NM_001128325 NM_001199021 NM_012445 NP_001121797 NP_001185950 NP_036577 | overlaps exon upstream | inside | 36188 | overlaps exon upstream | 0 | 3 | 8 | 5' UTR |
|
42029 | 4599 | 0.37 | FALSE |
| 276 | chr4 | 1165051 | 1165274 | 224 |
|
31.04757 | 6954.656 | 494023 | 494246 | 1 | 5842 | 6699.192 | 2.684598e+01 | 1.257656e+02 | 2.919643e+00 | 3.328424e+04 | 5.618750e+01 | 2.227960e+00 | -3.200842e+00 | 1.027592e+01 | 1.065543e+00 | 0.0882135 | FALSE | 0.5228326 | FALSE | SPON2 | NM_001128325 NM_001199021 NM_012445 NP_001121797 NP_001185950 NP_036577 | inside exon | inside | 0 | inside exon | 0 | 1 | 2 | overlaps 5' UTR |
|
4551 | 887 | 0.37 | FALSE |
| 277 | chr8 | 128446554 | 128446776 | 223 |
|
31.16929 | 6950.753 | 11930181 | 11930403 | 33 | 4738 | 3693.194 | 1.128227e+04 | 1.539238e+01 | 7.149370e+03 | 1.562108e+01 | 3.318386e+00 | -9.517625e+00 | -6.581689e-01 | -9.496347e+00 | -1.173129e+01 | 0.0883692 | FALSE | 0.5228326 | FALSE | CASC8 | NR_024393 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.37 | FALSE |
| 278 | chr2 | 64484474 | 64484730 | 257 |
|
27.01598 | 6943.107 | 6921723 | 6921979 | 15 | 2909 | 2295.901 | 7.691543e+03 | 5.982490e+00 | 3.768858e+03 | 1.270428e+00 | 1.185214e+01 | -1.032831e+01 | -1.029146e+00 | -1.256374e+01 | -9.341982e+00 | 0.0887583 | FALSE | 0.5228326 | FALSE | LINC00309 | NR_033837 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.37 | FALSE |
| 279 | chr16 | 65310126 | 65310326 | 201 |
|
34.49416 | 6933.326 | 8146761 | 8146961 | 12 | 2881 | 3853.101 | 9.898995e+03 | 7.238806e-01 | 9.365789e+03 | 0.000000e+00 | 0.000000e+00 | -1.373924e+01 | -7.988160e-02 | -1.000000e+100 | -1.000000e+100 | 0.0889918 | FALSE | 0.5228326 | FALSE | LINC00922 | NM_001101346 NR_027755 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.37 | FALSE |
| 280 | chr8 | 68632345 | 68632544 | 200 |
|
34.58629 | 6917.258 | 6967296 | 6967495 | 9 | 200 | 4255.481 | 1.282383e+04 | 1.603500e+01 | 8.434897e+03 | 2.525000e-01 | 2.395000e+00 | -9.643387e+00 | -6.043842e-01 | -1.563218e+01 | -1.238651e+01 | 0.0896144 | FALSE | 0.5228326 | FALSE | CPA6 | NM_001127445 NM_020361 NP_065094 | inside intron | inside | 26076 | inside intron | -25705 | 1 | 8 | inside transcription region |
|
263103 | 262471 | 0.37 | FALSE |
| 281 | chr8 | 120122338 | 120122593 | 256 |
|
26.63284 | 6818.007 | 11215100 | 11215355 | 32 | 10012 | 1939.823 | 6.992188e-01 | 0.000000e+00 | 7.539062e-01 | 9.695932e+03 | 1.730469e+00 | -1.000000e+100 | 1.086413e-01 | 1.375935e+01 | 1.307347e+00 | 0.0920269 | FALSE | 0.5228326 | FALSE | COLEC10 | NM_006438 NP_006429 XM_005250756 XP_005250813 | downstream | downstream | 42914 | NA | NA | NA | 6 | NA |
|
39778 | 38909 | 0.37 | FALSE |
| 282 | chr5 | 92930097 | 92930311 | 215 |
|
31.64646 | 6803.988 | 9129215 | 9129429 | 13 | 857 | 2452.977 | 9.325581e-01 | 2.304651e+00 | 2.348837e-01 | 8.843465e+03 | 3.417949e+03 | 1.305283e+00 | -1.989247e+00 | 1.321113e+01 | 1.183965e+01 | 0.0921048 | FALSE | 0.5228326 | FALSE | NR2F1 | NM_005654 NP_005645 | downstream | downstream | 11054 | NA | NA | NA | 3 | NA |
|
10743 | 8818 | 0.37 | FALSE |
| 283 | chrX | 124523282 | 124523524 | 243 |
|
27.86085 | 6770.186 | 10071433 | 10071675 | 30 | 5372 | 2103.455 | 5.693156e+03 | 4.732510e-02 | 4.824072e+03 | 0.000000e+00 | 0.000000e+00 | -1.687626e+01 | -2.389773e-01 | -1.000000e+100 | -1.000000e+100 | 0.0928830 | FALSE | 0.5228326 | FALSE | LOC100129520 | NM_001195272 NP_001182201 XM_005262352 XP_005262409 | downstream | downstream | 69313 | NA | NA | NA | 1 | NA |
|
2981 | 2981 | 0.37 | FALSE |
| 284 | chr14 | 99454807 | 99454989 | 183 |
|
36.96807 | 6765.157 | 9067028 | 9067210 | 15 | 4207 | 5619.062 | 2.151787e+04 | 9.478142e+00 | 6.563481e+03 | 4.644809e-01 | 4.013661e+00 | -1.114864e+01 | -1.713002e+00 | -1.549956e+01 | -1.238833e+01 | 0.0930386 | FALSE | 0.5228326 | FALSE | BCL11B | NM_001282237 NM_001282238 NM_022898 NM_138576 NP_001269166 NP_001269167 NP_075049 NP_612808 | downstream | downstream | 282833 | NA | NA | NA | 4 | NA |
|
102197 | 97067 | 0.37 | FALSE |
| 285 | chrX | 110790451 | 110790638 | 188 |
|
35.98405 | 6765.002 | 8809877 | 8810064 | 22 | 4520 | 4917.582 | 1.870336e+04 | 5.372340e+00 | 5.876902e+03 | 0.000000e+00 | 2.281915e+00 | -1.176546e+01 | -1.670170e+00 | -1.000000e+100 | -1.300076e+01 | 0.0930386 | FALSE | 0.5228326 | FALSE | LINC00890 | NR_033974 | NA | NA | 0 | NA | NA | NA | 3 | NA |
|
0 | 0 | 0.37 | FALSE |
| 286 | chr1 | 222149070 | 222149236 | 167 |
|
40.49075 | 6761.955 | 28571571 | 28571737 | 39 | 8614 | 7858.734 | 2.198943e+04 | 2.336228e+01 | 1.727517e+04 | 5.000000e-01 | 5.206587e+00 | -9.878414e+00 | -3.481103e-01 | -1.542452e+01 | -1.204418e+01 | 0.0931165 | FALSE | 0.5228326 | FALSE | DUSP10 | NM_007207 NM_144728 NM_144729 NP_009138 NP_653329 NP_653330 | upstream | upstream | 233554 | NA | NA | NA | 4 | NA |
|
40752 | 37332 | 0.37 | FALSE |
| 287 | chrX | 86942042 | 86942292 | 251 |
|
26.85754 | 6741.244 | 6796316 | 6796566 | 11 | 4336 | 2085.219 | 7.464253e+03 | 2.449004e+01 | 2.936966e+03 | 0.000000e+00 | 3.864542e-01 | -8.251659e+00 | -1.345671e+00 | -1.000000e+100 | -1.423741e+01 | 0.0936612 | FALSE | 0.5228326 | FALSE | KLHL4 | NM_019117 NM_057162 NP_061990 NP_476503 | downstream | downstream | 169327 | NA | NA | NA | 11 | NA |
|
152335 | 148637 | 0.37 | FALSE |
| 288 | chr7 | 42910910 | 42911099 | 190 |
|
35.41586 | 6729.014 | 4863144 | 4863333 | 11 | 3821 | 4822.849 | 1.675131e+04 | 1.008947e+01 | 7.346600e+03 | 1.639474e+00 | 4.605263e+00 | -1.069721e+01 | -1.189125e+00 | -1.331875e+01 | -1.182870e+01 | 0.0942060 | FALSE | 0.5228326 | FALSE | C7orf25 | NM_001099858 NM_024054 NP_001093328 NP_076959 XM_005249844 XP_005249901 | downstream | downstream | 41052 | NA | NA | NA | 2 | NA |
|
3279 | 2432 | 0.37 | FALSE |
| 289 | chr8 | 115257423 | 115257613 | 191 |
|
35.19273 | 6721.811 | 10959638 | 10959828 | 25 | 3330 | 4770.685 | 1.195051e+04 | 3.364136e+01 | 1.186719e+04 | 0.000000e+00 | 2.086387e+00 | -8.472620e+00 | -1.009410e-02 | -1.000000e+100 | -1.248378e+01 | 0.0945173 | FALSE | 0.5228326 | FALSE | CSMD3 | NM_052900 NM_198123 NM_198124 NP_443132 NP_937756 NP_937757 | upstream | upstream | 808181 | NA | NA | NA | 71 | NA |
|
1214083 | 1212083 | 0.37 | FALSE |
| 290 | chrX | 113836074 | 113836222 | 149 |
|
45.11087 | 6721.519 | 9203172 | 9203320 | 25 | 4367 | 11994.303 | 4.722215e+04 | 2.654362e+00 | 1.273579e+04 | 8.687919e+00 | 2.231544e+00 | -1.411881e+01 | -1.890576e+00 | -1.240817e+01 | -1.436913e+01 | 0.0945173 | FALSE | 0.5228326 | FALSE | HTR2C | NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690 | inside intron | inside | 17523 | inside intron | 12051 | 2 | 7 | 5' UTR |
|
326073 | 180632 | 0.37 | FALSE |
| 291 | chr2 | 12769181 | 12769393 | 213 |
|
31.45366 | 6699.630 | 1219658 | 1219870 | 4 | 3899 | 3962.683 | 1.208664e+04 | 1.168779e+01 | 7.697944e+03 | 7.021127e+00 | 1.012676e+01 | -1.001419e+01 | -6.508678e-01 | -1.074942e+01 | -1.022102e+01 | 0.0950621 | FALSE | 0.5228326 | FALSE | TRIB2 | NM_021643 NP_067675 NR_027303 | upstream | upstream | 87605 | NA | NA | NA | 3 | NA |
|
25860 | 22486 | 0.37 | FALSE |
| 292 | chr4 | 1164787 | 1164978 | 192 |
|
34.79042 | 6679.761 | 493759 | 493950 | 1 | 5842 | 13761.690 | 5.725781e+01 | 2.632552e+02 | 3.143229e+00 | 6.836307e+04 | 1.217188e+02 | 2.200918e+00 | -4.187153e+00 | 1.022153e+01 | 1.088007e+00 | 0.0956068 | FALSE | 0.5228326 | FALSE | SPON2 | NM_001128325 NM_001199021 NM_012445 NP_001121797 NP_001185950 NP_036577 | inside exon | inside | 296 | inside exon | 0 | 2 | 2 | inside transcription region |
|
4551 | 887 | 0.37 | FALSE |
| 293 | chr3 | 54667586 | 54667767 | 182 |
|
36.64632 | 6669.631 | 7020827 | 7021008 | 12 | 7966 | 4577.307 | 1.358307e+04 | 8.087912e+00 | 9.294698e+03 | 0.000000e+00 | 6.758242e-01 | -1.071376e+01 | -5.473302e-01 | -1.000000e+100 | -1.429480e+01 | 0.0957625 | FALSE | 0.5228326 | FALSE | ESRG | NR_027122 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.37 | FALSE |
| 294 | chr1 | 62675976 | 62676222 | 247 |
|
26.92540 | 6650.573 | 11179373 | 11179619 | 12 | 5031 | 7612.496 | 1.775001e+04 | 1.760395e+03 | 1.776672e+04 | 0.000000e+00 | 7.853543e+02 | -3.333849e+00 | 1.357700e-03 | -1.000000e+100 | -4.498333e+00 | 0.0963072 | FALSE | 0.5228326 | FALSE | L1TD1 | NM_001164835 NM_019079 NP_001158307 NP_061952 | inside exon | inside | 15502 | inside exon | 0 | 5 | 5 | inside transcription region |
|
17527 | 4743 | 0.37 | FALSE |
| 295 | chrX | 86942383 | 86942564 | 182 |
|
36.41493 | 6627.517 | 6796657 | 6796838 | 11 | 4336 | 4883.717 | 1.382548e+04 | 5.250000e+00 | 1.058761e+04 | 2.445055e-01 | 0.000000e+00 | -1.136272e+01 | -3.849534e-01 | -1.578710e+01 | -1.000000e+100 | 0.0966185 | FALSE | 0.5228326 | FALSE | KLHL4 | NM_019117 NM_057162 NP_061990 NP_476503 | downstream | downstream | 169668 | NA | NA | NA | 11 | NA |
|
152335 | 148637 | 0.37 | FALSE |
| 296 | chr6 | 120784782 | 120784990 | 209 |
|
31.58100 | 6600.430 | 12973437 | 12973645 | 25 | 2194 | 3222.344 | 1.073701e+04 | 1.543062e+01 | 5.358230e+03 | 7.559809e-01 | 2.942584e-01 | -9.442581e+00 | -1.002764e+00 | -1.379388e+01 | -1.515515e+01 | 0.0973190 | FALSE | 0.5228326 | FALSE | TBC1D32 | NM_152730 NP_689943 NR_104452 XM_005266861 XP_005266918 | downstream | downstream | 870654 | NA | NA | NA | 32 | NA |
|
255017 | 253659 | 0.37 | FALSE |
| 297 | chr5 | 135903844 | 135904023 | 180 |
|
36.48373 | 6567.071 | 13263116 | 13263295 | 32 | 3903 | 5154.858 | 1.480095e+04 | 9.472222e+00 | 1.096281e+04 | 0.000000e+00 | 1.050000e+00 | -1.060970e+01 | -4.330719e-01 | -1.000000e+100 | -1.378301e+01 | 0.0976303 | FALSE | 0.5228326 | FALSE | TRPC7 | NM_001167576 NM_001167577 NM_020389 NP_001161048 NP_001161049 NP_065122 XM_005272036 XP_005272093 | upstream | upstream | 202680 | NA | NA | NA | 12 | NA |
|
152165 | 151819 | 0.37 | FALSE |
| 298 | chr9 | 90028970 | 90029151 | 182 |
|
36.00097 | 6552.177 | 8214687 | 8214868 | 12 | 5446 | 4678.400 | 1.332907e+04 | 9.587912e-01 | 1.006170e+04 | 0.000000e+00 | 2.774725e-01 | -1.376300e+01 | -4.057026e-01 | -1.000000e+100 | -1.555187e+01 | 0.0977859 | FALSE | 0.5228326 | FALSE | DAPK1 | NM_001288729 NM_001288730 NM_001288731 NM_004938 NP_001275658 NP_001275659 NP_001275660 NP_004929 XM_005251757 XM_006716988 XP_005251814 XP_006717051 | upstream | upstream | 83507 | NA | NA | NA | 26 | NA |
|
210891 | 208286 | 0.37 | FALSE |
| 299 | chr13 | 35375391 | 35375587 | 197 |
|
33.23331 | 6546.962 | 1762782 | 1762978 | 1 | 834 | 4793.976 | 1.344866e+04 | 4.863959e+01 | 1.046036e+04 | 2.068528e+00 | 1.014213e+01 | -8.111116e+00 | -3.625301e-01 | -1.266657e+01 | -1.037289e+01 | 0.0977859 | FALSE | 0.5228326 | FALSE | NBEA | NM_001204197 NM_015678 NP_001191126 NP_056493 XM_005266346 XM_005266347 XM_005266348 XM_005266350 XM_005266351 XM_005266352 XM_006719803 XM_006719804 XM_006719805 XM_006719806 XP_005266403 XP_005266404 XP_005266405 XP_005266407 XP_005266408 XP_005266409 XP_006719866 XP_006719867 XP_006719868 XP_006719869 | upstream | upstream | 140837 | NA | NA | NA | 57 | NA |
|
730450 | 728170 | 0.37 | FALSE |
| 300 | chr2 | 67558971 | 67559171 | 201 |
|
32.53826 | 6540.191 | 7283783 | 7283983 | 17 | 8129 | 3667.400 | 1.638919e+04 | 0.000000e+00 | 1.946990e+03 | 8.208955e-01 | 0.000000e+00 | -1.000000e+100 | -3.073427e+00 | -1.428519e+01 | -1.000000e+100 | 0.0977859 | FALSE | 0.5228326 | FALSE | ETAA1 | NM_019002 NP_061875 XM_005264374 XM_005264375 XM_005264376 XM_005264377 XM_005264378 XP_005264431 XP_005264432 XP_005264433 XP_005264434 XP_005264435 | upstream | upstream | 65271 | NA | NA | NA | 6 | NA |
|
13091 | 12589 | 0.37 | FALSE |
| 301 | chr4 | 23725566 | 23725752 | 187 |
|
34.93023 | 6531.953 | 3032040 | 3032226 | 7 | 3112 | 4395.455 | 1.589335e+04 | 1.237701e+01 | 6.071273e+03 | 0.000000e+00 | 2.700535e-01 | -1.032655e+01 | -1.388353e+00 | -1.000000e+100 | -1.584482e+01 | 0.0980972 | FALSE | 0.5228326 | FALSE | PPARGC1A | NM_013261 NP_037393 XM_005248130 XM_005248131 XM_005248132 XM_005248134 XP_005248187 XP_005248188 XP_005248189 XP_005248191 | downstream | downstream | 165948 | NA | NA | NA | 13 | NA |
|
98056 | 94135 | 0.37 | FALSE |
| 302 | chrX | 30124024 | 30124194 | 171 |
|
38.06561 | 6509.220 | 2324352 | 2324522 | 7 | 174 | 7112.271 | 1.526326e+04 | 8.334795e+01 | 2.020499e+04 | 6.725146e+00 | 3.026316e+00 | -7.516701e+00 | 4.046485e-01 | -1.114821e+01 | -1.230021e+01 | 0.0987198 | FALSE | 0.5228326 | FALSE | MAGEB2 | NM_002364 NP_002355 | upstream | upstream | 109481 | NA | NA | NA | 2 | NA |
|
4531 | 959 | 0.37 | FALSE |
| 303 | chr8 | 115309377 | 115309617 | 241 |
|
26.96773 | 6499.223 | 10979384 | 10979624 | 27 | 1886 | 1981.315 | 8.123421e+03 | 0.000000e+00 | 1.783156e+03 | 0.000000e+00 | 0.000000e+00 | -1.000000e+100 | -2.187655e+00 | -1.000000e+100 | -1.000000e+100 | 0.0990311 | FALSE | 0.5228326 | FALSE | CSMD3 | NM_052900 NM_198123 NM_198124 NP_443132 NP_937756 NP_937757 | upstream | upstream | 860135 | NA | NA | NA | 71 | NA |
|
1214083 | 1212083 | 0.37 | FALSE |
| 304 | chr20 | 12323450 | 12323640 | 191 |
|
34.01624 | 6497.102 | 1421055 | 1421245 | 2 | 4153 | 4343.303 | 1.525296e+04 | 6.057592e+00 | 6.450401e+03 | 0.000000e+00 | 7.096859e+00 | -1.129806e+01 | -1.241629e+00 | -1.000000e+100 | -1.106962e+01 | 0.0991089 | FALSE | 0.5228326 | FALSE | BTBD3 | NM_001282550 NM_001282551 NM_001282552 NM_001282554 NM_014962 NM_181443 NP_001269479 NP_001269480 NP_001269481 NP_001269483 NP_055777 NP_852108 XM_006723550 XM_006723551 XP_006723613 XP_006723614 | downstream | downstream | 451973 | NA | NA | NA | 5 | NA |
|
35766 | 5207 | 0.37 | FALSE |
| 305 | chr20 | 13340238 | 13340434 | 197 |
|
32.92898 | 6487.010 | 1484102 | 1484298 | 4 | 4259 | 3927.469 | 1.090041e+04 | 1.329949e+01 | 8.714942e+03 | 6.672589e+00 | 2.025381e+00 | -9.678795e+00 | -3.228190e-01 | -1.067385e+01 | -1.239390e+01 | 0.0994202 | FALSE | 0.5228326 | FALSE | TASP1 | NM_017714 NP_060184 XM_006723589 XM_006723590 XP_006723652 XP_006723653 XR_430268 | NA | NA | 0 | NA | NA | NA | 10 | NA |
|
0 | 0 | 0.37 | FALSE |
| 306 | chr12 | 10487419 | 10487607 | 189 |
|
34.23367 | 6470.163 | 2150760 | 2150948 | 7 | 3160 | 3904.516 | 1.433657e+04 | 3.703704e+00 | 5.181087e+03 | 5.317460e-01 | 6.851852e-01 | -1.191844e+01 | -1.468373e+00 | -1.471860e+01 | -1.435285e+01 | 0.1000428 | FALSE | 0.5228326 | FALSE | KLRD1 | NM_001114396 NM_002262 NM_007334 NP_001107868 NP_002253 NP_031360 XM_005253363 XM_006719065 XM_006719066 XM_006719067 XM_006719068 XP_005253420 XP_006719128 XP_006719129 XP_006719130 XP_006719131 | downstream | downstream | 30369 | NA | NA | NA | 7 | NA |
|
12800 | 6715 | 0.37 | FALSE |
| 307 | chr9 | 124558815 | 124558992 | 178 |
|
36.33056 | 6466.840 | 12600430 | 12600607 | 22 | 3252 | 5028.384 | 1.815258e+04 | 2.669663e+01 | 6.962643e+03 | 0.000000e+00 | 0.000000e+00 | -9.409301e+00 | -1.382468e+00 | -1.000000e+100 | -1.000000e+100 | 0.1001985 | FALSE | 0.5228326 | FALSE | DAB2IP | NM_032552 NM_138709 NP_115941 NP_619723 XM_005251719 XM_005251720 XM_005251721 XM_005251722 XM_005251723 XM_005251724 XM_005251725 XM_006716961 XM_006716962 XP_005251776 XP_005251777 XP_005251778 XP_005251779 XP_005251780 XP_005251781 XP_005251782 XP_006717024 XP_006717025 | downstream | downstream | 229416 | NA | NA | NA | 17 | NA |
|
218410 | 216356 | 0.37 | FALSE |
| 308 | chr2 | 207675919 | 207676094 | 176 |
|
36.72709 | 6463.968 | 22283174 | 22283349 | 48 | 4653 | 5197.723 | 1.568638e+04 | 8.420454e+00 | 1.029019e+04 | 0.000000e+00 | 3.619318e+00 | -1.086333e+01 | -6.082427e-01 | -1.000000e+100 | -1.208151e+01 | 0.1001985 | FALSE | 0.5228326 | FALSE | FASTKD2 | NM_001136193 NM_001136194 NM_014929 NP_001129665 NP_001129666 NP_055744 | downstream | downstream | 45807 | NA | NA | NA | 12 | NA |
|
30799 | 25108 | 0.37 | FALSE |
| 309 | chr6 | 14299624 | 14299770 | 147 |
|
43.85337 | 6446.445 | 1531078 | 1531224 | 3 | 3927 | 9731.033 | 3.628614e+04 | 3.364286e+01 | 1.233538e+04 | 0.000000e+00 | 0.000000e+00 | -1.007490e+01 | -1.556616e+00 | -1.000000e+100 | -1.000000e+100 | 0.1007432 | FALSE | 0.5228326 | FALSE | CD83 | NM_001040280 NM_001251901 NM_004233 NP_001035370 NP_001238830 NP_004224 | downstream | downstream | 182137 | NA | NA | NA | 5 | NA |
|
19661 | 3692 | 0.37 | FALSE |
| 310 | chr2 | 209945995 | 209946170 | 176 |
|
36.61539 | 6444.309 | 22600522 | 22600697 | 49 | 2661 | 4922.054 | 1.858332e+04 | 1.007955e+01 | 6.015412e+03 | 0.000000e+00 | 1.457386e+00 | -1.084836e+01 | -1.627273e+00 | -1.000000e+100 | -1.363834e+01 | 0.1007432 | FALSE | 0.5228326 | FALSE | PTH2R | NM_005048 NP_005039 NR_073601 | NA | NA | 0 | NA | NA | NA | 7 | NA |
|
0 | 0 | 0.37 | FALSE |
| 311 | chr4 | 146758145 | 146758375 | 231 |
|
27.86168 | 6436.048 | 13415794 | 13416024 | 40 | 4092 | 2161.041 | 6.933162e+03 | 5.207792e+00 | 3.865229e+03 | 1.904762e-01 | 1.413420e+00 | -1.037863e+01 | -8.429595e-01 | -1.515162e+01 | -1.226011e+01 | 0.1008989 | FALSE | 0.5228326 | FALSE | ZNF827 | NM_178835 NP_849157 XM_006714094 XM_006714095 XM_006714096 XP_006714157 XP_006714158 XP_006714159 | inside intron | inside | 101232 | inside intron | -8733 | 6 | 14 | inside transcription region |
|
177719 | 175300 | 0.37 | FALSE |
| 312 | chr4 | 23725889 | 23726111 | 223 |
|
28.85168 | 6433.925 | 3032363 | 3032585 | 7 | 3112 | 2668.636 | 1.112001e+04 | 6.289238e+00 | 2.210464e+03 | 5.369955e+00 | 1.044843e+00 | -1.078799e+01 | -2.330737e+00 | -1.101596e+01 | -1.337758e+01 | 0.1008989 | FALSE | 0.5228326 | FALSE | PPARGC1A | NM_013261 NP_037393 XM_005248130 XM_005248131 XM_005248132 XM_005248134 XP_005248187 XP_005248188 XP_005248189 XP_005248191 | downstream | downstream | 165589 | NA | NA | NA | 13 | NA |
|
98056 | 94135 | 0.37 | FALSE |
| 313 | chr14 | 101198379 | 101198520 | 142 |
|
45.24460 | 6424.733 | 9360881 | 9361022 | 17 | 8209 | 24220.700 | 1.291549e+01 | 4.662676e+01 | 7.954225e+00 | 1.386644e+03 | 1.196494e+05 | 1.852056e+00 | -6.993094e-01 | 6.746351e+00 | 1.317742e+01 | 0.1012880 | FALSE | 0.5228326 | FALSE | DLK1 | NM_001032997 NM_003836 NP_003827 | inside exon | inside | 5177 | inside exon | 0 | 4 | 5 | inside transcription region |
|
8265 | 7827 | 0.37 | FALSE |
| 314 | chr8 | 116227830 | 116228043 | 214 |
|
29.98884 | 6417.612 | 11016869 | 11017082 | 28 | 5526 | 2804.063 | 1.066969e+04 | 8.757009e+00 | 3.335867e+03 | 5.317757e+00 | 6.799065e-01 | -1.025079e+01 | -1.677385e+00 | -1.097041e+01 | -1.393782e+01 | 0.1015215 | FALSE | 0.5228326 | FALSE | TRPS1 | NM_001282902 NM_001282903 NM_014112 NP_001269831 NP_001269832 NP_054831 XM_005251049 XM_006716624 XM_006716625 XP_005251106 XP_006716687 XP_006716688 | downstream | downstream | 452191 | NA | NA | NA | 6 | NA |
|
259510 | 253859 | 0.37 | FALSE |
| 315 | chr13 | 54706763 | 54706973 | 211 |
|
30.41512 | 6417.590 | 4340925 | 4341135 | 9 | 1927 | 3239.926 | 9.847611e+03 | 1.482062e+02 | 6.202140e+03 | 0.000000e+00 | 1.670616e+00 | -6.054096e+00 | -6.670078e-01 | -1.000000e+100 | -1.252518e+01 | 0.1015215 | FALSE | 0.5228326 | FALSE | MIR1297 | NR_031628 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.37 | FALSE |
| 316 | chr6 | 95266663 | 95266893 | 231 |
|
27.70032 | 6398.775 | 10594346 | 10594576 | 19 | 4107 | 2638.404 | 8.238677e+03 | 7.861472e+00 | 4.928868e+03 | 6.121212e+00 | 1.049351e+01 | -1.003340e+01 | -7.411564e-01 | -1.039438e+01 | -9.616772e+00 | 0.1015993 | FALSE | 0.5228326 | FALSE | MANEA | NM_024641 NP_078917 XM_005267147 XP_005267204 | upstream | upstream | 758480 | NA | NA | NA | 2 | NA |
|
9881 | 596 | 0.37 | FALSE |
| 317 | chr8 | 72588362 | 72588567 | 206 |
|
30.89879 | 6365.151 | 7344408 | 7344613 | 11 | 5162 | 3056.603 | 1.004167e+04 | 1.453884e+00 | 5.236345e+03 | 0.000000e+00 | 3.546117e+00 | -1.275380e+01 | -9.393672e-01 | -1.000000e+100 | -1.146747e+01 | 0.1026110 | FALSE | 0.5228326 | FALSE | MSC | NM_005098 NP_005089 | downstream | downstream | 168164 | NA | NA | NA | 2 | NA |
|
2954 | 1517 | 0.37 | FALSE |
| 318 | chr6 | 21364548 | 21364745 | 198 |
|
32.09277 | 6354.369 | 2104283 | 2104480 | 8 | 4726 | 3597.970 | 9.545217e+03 | 2.129040e+01 | 8.420452e+03 | 4.595960e-01 | 2.429293e+00 | -8.808431e+00 | -1.808803e-01 | -1.434212e+01 | -1.194003e+01 | 0.1031558 | FALSE | 0.5228326 | FALSE | CDKAL1 | NM_017774 NP_060244 XM_006715127 XM_006715128 XP_006715190 XP_006715191 | downstream | downstream | 829860 | NA | NA | NA | 16 | NA |
|
697946 | 684688 | 0.37 | FALSE |
| 319 | chr6 | 31133348 | 31133478 | 131 |
|
48.17797 | 6311.314 | 3900751 | 3900881 | 9 | 1641 | 14529.150 | 2.892922e+04 | 4.672901e+01 | 4.365926e+04 | 1.335878e-01 | 1.040840e+01 | -9.273993e+00 | 5.937604e-01 | -1.772438e+01 | -1.144056e+01 | 0.1043231 | FALSE | 0.5228326 | FALSE | POU5F1 | NM_001173531 NM_001285986 NM_001285987 NM_002701 NM_203289 NP_001167002 NP_001272915 NP_001272916 NP_002692 NP_976034 | inside exon | inside | 4973 | inside exon | 0 | 3 | 5 | inside transcription region |
|
6337 | 6019 | 0.37 | FALSE |
| 320 | chr12 | 11617077 | 11617246 | 170 |
|
37.11849 | 6310.144 | 2388918 | 2389087 | 8 | 2899 | 5553.922 | 1.433513e+04 | 4.706176e+01 | 1.338721e+04 | 0.000000e+00 | 2.058824e-01 | -8.250784e+00 | -9.870000e-02 | -1.000000e+100 | -1.608738e+01 | 0.1044009 | FALSE | 0.5228326 | FALSE | PRB2 | NM_006248 NP_006239 | upstream | upstream | 68579 | NA | NA | NA | 4 | NA |
|
4024 | 2702 | 0.37 | FALSE |
| 321 | chr5 | 147251294 | 147251427 | 134 |
|
46.98446 | 6295.918 | 15122702 | 15122835 | 34 | 4040 | 11500.094 | 2.812660e+04 | 3.122761e+01 | 2.934264e+04 | 0.000000e+00 | 0.000000e+00 | -9.814897e+00 | 6.106360e-02 | -1.000000e+100 | -1.000000e+100 | 0.1047122 | FALSE | 0.5228326 | FALSE | SCGB3A2 | NM_054023 NP_473364 | upstream | upstream | 6847 | NA | NA | NA | 3 | NA |
|
3482 | 3246 | 0.37 | FALSE |
| 322 | chr9 | 118604015 | 118604202 | 188 |
|
33.39141 | 6277.585 | 12092311 | 12092498 | 19 | 2207 | 4333.357 | 1.382071e+04 | 1.437234e+01 | 7.818476e+03 | 7.420213e-01 | 1.248670e+01 | -9.909321e+00 | -8.218724e-01 | -1.418501e+01 | -1.011222e+01 | 0.1051014 | FALSE | 0.5228326 | FALSE | LINC00474 | NM_021208 NR_024032 | NA | NA | 0 | NA | NA | NA | 3 | NA |
|
0 | 0 | 0.37 | FALSE |
| 323 | chr10 | 55929728 | 55929887 | 160 |
|
39.18622 | 6269.795 | 5621258 | 5621417 | 11 | 4015 | 6055.391 | 2.257400e+04 | 1.363750e+01 | 7.687431e+03 | 3.156250e-01 | 1.565625e+00 | -1.069287e+01 | -1.554089e+00 | -1.612609e+01 | -1.381564e+01 | 0.1052570 | FALSE | 0.5228326 | FALSE | PCDH15 | NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056 NP_001136235 NP_001136236 NP_001136237 NP_001136238 NP_001136239 NP_001136240 NP_001136241 NP_001136242 NP_001136243 NP_001136244 NP_001136245 NP_149045 XM_006717950 XP_006718013 | inside intron | inside | 631164 | inside intron | -13317 | 13 | 21 | inside transcription region |
|
806711 | 668631 | 0.37 | FALSE |
| 324 | chr9 | 93178695 | 93178902 | 208 |
|
30.12040 | 6265.043 | 8540823 | 8541030 | 13 | 5274 | 2851.010 | 9.003781e+03 | 1.914423e+01 | 5.231637e+03 | 2.572115e-01 | 2.283654e-01 | -8.877477e+00 | -7.832686e-01 | -1.509529e+01 | -1.526690e+01 | 0.1054905 | FALSE | 0.5228326 | FALSE | RP11-555F9.2 | NM_001105317 NR_034157 | downstream | downstream | 166126 | NA | NA | NA | 6 | NA |
|
120314 | 42211 | 0.37 | FALSE |
| 325 | chr15 | 36578519 | 36578693 | 175 |
|
35.73006 | 6252.760 | 2098735 | 2098909 | 3 | 2832 | 5290.906 | 2.112681e+04 | 2.692571e+01 | 5.299131e+03 | 2.457143e-01 | 1.417143e+00 | -9.615875e+00 | -1.995247e+00 | -1.639173e+01 | -1.386380e+01 | 0.1058796 | FALSE | 0.5228326 | FALSE | C15orf41 | NM_001130010 NM_001290232 NM_001290233 NM_032499 NP_001123482 NP_001277161 NP_001277162 NP_115888 XM_005254719 XP_005254776 | upstream | upstream | 293119 | NA | NA | NA | 12 | NA |
|
230637 | 228592 | 0.37 | FALSE |
| 326 | chr8 | 120122875 | 120123118 | 244 |
|
25.59670 | 6245.594 | 11215637 | 11215880 | 32 | 10012 | 1722.219 | 1.487705e+00 | 0.000000e+00 | 0.000000e+00 | 8.608734e+03 | 8.750000e-01 | -1.000000e+100 | -1.000000e+100 | 1.249850e+01 | -7.657335e-01 | 0.1059574 | FALSE | 0.5228326 | FALSE | COLEC10 | NM_006438 NP_006429 XM_005250756 XP_005250813 | downstream | downstream | 43451 | NA | NA | NA | 6 | NA |
|
39778 | 38909 | 0.37 | FALSE |
| 327 | chr11 | 94082932 | 94083082 | 151 |
|
41.35329 | 6244.347 | 12536022 | 12536172 | 17 | 802 | 8865.132 | 1.656426e+04 | 1.146159e+02 | 2.764631e+04 | 0.000000e+00 | 4.768212e-01 | -7.175123e+00 | 7.390132e-01 | -1.000000e+100 | -1.508427e+01 | 0.1060353 | FALSE | 0.5228326 | FALSE | GPR83 | NM_016540 NP_057624 | downstream | downstream | 51503 | NA | NA | NA | 4 | NA |
|
24108 | 21098 | 0.37 | FALSE |
| 328 | chrX | 124525809 | 124526019 | 211 |
|
29.58285 | 6241.981 | 10073960 | 10074170 | 30 | 5372 | 2463.249 | 6.811701e+03 | 2.154028e+00 | 5.502391e+03 | 0.000000e+00 | 0.000000e+00 | -1.162676e+01 | -3.079565e-01 | -1.000000e+100 | -1.000000e+100 | 0.1061131 | FALSE | 0.5228326 | FALSE | LOC100129520 | NM_001195272 NP_001182201 XM_005262352 XP_005262409 | downstream | downstream | 71840 | NA | NA | NA | 1 | NA |
|
2981 | 2981 | 0.37 | FALSE |
| 329 | chr1 | 62672824 | 62673070 | 247 |
|
25.24224 | 6234.834 | 11176221 | 11176467 | 12 | 5031 | 6088.421 | 1.367060e+04 | 1.505737e+03 | 1.458763e+04 | 0.000000e+00 | 6.781316e+02 | -3.182535e+00 | 9.366880e-02 | -1.000000e+100 | -4.333368e+00 | 0.1065022 | FALSE | 0.5228326 | FALSE | L1TD1 | NM_001164835 NM_019079 NP_001158307 NP_061952 | inside exon | inside | 12350 | inside exon | 0 | 4 | 5 | inside transcription region |
|
17527 | 4743 | 0.37 | FALSE |
| 330 | chr1 | 223197776 | 223197904 | 129 |
|
48.25908 | 6225.422 | 28746966 | 28747094 | 40 | 5414 | 15445.724 | 2.681548e+04 | 1.862016e+02 | 5.022694e+04 | 0.000000e+00 | 0.000000e+00 | -7.170057e+00 | 9.053955e-01 | -1.000000e+100 | -1.000000e+100 | 0.1067357 | FALSE | 0.5228326 | FALSE | DISP1 | NM_032890 NP_116279 XM_005273335 XM_005273336 XM_006711592 XM_006711593 XM_006711594 XM_006711595 XP_005273392 XP_005273393 XP_006711655 XP_006711656 XP_006711657 XP_006711658 | downstream | downstream | 209345 | NA | NA | NA | 10 | NA |
|
190906 | 63148 | 0.37 | FALSE |
| 331 | chr20 | 38723658 | 38723849 | 192 |
|
32.40059 | 6220.913 | 4359094 | 4359285 | 9 | 961 | 3297.679 | 1.194394e+04 | 1.455729e+00 | 4.542997e+03 | 0.000000e+00 | 0.000000e+00 | -1.300225e+01 | -1.394563e+00 | -1.000000e+100 | -1.000000e+100 | 0.1068135 | FALSE | 0.5228326 | FALSE | MAFB | NM_005461 NP_005452 | downstream | downstream | 594027 | NA | NA | NA | 1 | NA |
|
3359 | 971 | 0.37 | FALSE |
| 332 | chr4 | 167640397 | 167640549 | 153 |
|
40.62840 | 6216.146 | 14815064 | 14815216 | 45 | 5581 | 7293.722 | 2.043572e+04 | 1.857190e+01 | 1.601366e+04 | 0.000000e+00 | 6.601307e-01 | -1.010376e+01 | -3.517899e-01 | -1.000000e+100 | -1.491798e+01 | 0.1068913 | FALSE | 0.5228326 | FALSE | SPOCK3 | NM_001040159 NM_001204352 NM_001204353 NM_001204354 NM_001204355 NM_001204356 NM_001204358 NM_001204359 NM_001251967 NM_016950 NP_001035249 NP_001191281 NP_001191282 NP_001191283 NP_001191284 NP_001191285 NP_001191287 NP_001238896 NP_058646 XM_005263041 XP_005263098 | downstream | downstream | 514775 | NA | NA | NA | 11 | NA |
|
500788 | 499252 | 0.37 | FALSE |
| 333 | chr4 | 93364275 | 93364429 | 155 |
|
40.05774 | 6208.949 | 8759977 | 8760131 | 26 | 3792 | 7166.806 | 1.762556e+04 | 4.935484e+01 | 1.815878e+04 | 0.000000e+00 | 3.354839e-01 | -8.480262e+00 | 4.299860e-02 | -1.000000e+100 | -1.568107e+01 | 0.1070470 | FALSE | 0.5228326 | FALSE | GRID2 | NM_001286838 NM_001510 NP_001273767 NP_001501 XM_006714195 XP_006714258 | inside intron | inside | 138725 | inside intron | -138380 | 1 | 15 | inside transcription region |
|
1468099 | 1467841 | 0.37 | FALSE |
| 334 | chr8 | 116830121 | 116830346 | 226 |
|
27.46938 | 6208.080 | 11040216 | 11040441 | 29 | 226 | 2155.253 | 7.598217e+03 | 7.451327e+00 | 3.168414e+03 | 0.000000e+00 | 2.181416e+00 | -9.993948e+00 | -1.261900e+00 | -1.000000e+100 | -1.176618e+01 | 0.1070470 | FALSE | 0.5228326 | FALSE | LINC00536 | NR_046215 | NA | NA | 0 | NA | NA | NA | 14 | NA |
|
0 | 0 | 0.37 | FALSE |
| 335 | chr8 | 115294298 | 115294495 | 198 |
|
31.29644 | 6196.695 | 10964305 | 10964502 | 26 | 5529 | 2895.591 | 1.070261e+04 | 5.303030e-01 | 3.774813e+03 | 0.000000e+00 | 0.000000e+00 | -1.430079e+01 | -1.503486e+00 | -1.000000e+100 | -1.000000e+100 | 0.1074361 | FALSE | 0.5228326 | FALSE | CSMD3 | NM_052900 NM_198123 NM_198124 NP_443132 NP_937756 NP_937757 | upstream | upstream | 845056 | NA | NA | NA | 71 | NA |
|
1214083 | 1212083 | 0.37 | FALSE |
| 336 | chr12 | 86276001 | 86276186 | 186 |
|
33.27310 | 6188.797 | 10643993 | 10644178 | 25 | 340 | 7344.994 | 8.565790e+03 | 7.746237e+01 | 2.805776e+04 | 3.844086e-01 | 2.356989e+01 | -6.788947e+00 | 1.711742e+00 | -1.444366e+01 | -8.505497e+00 | 0.1079030 | FALSE | 0.5228326 | FALSE | NTS | NM_006183 NP_006174 | inside exon | inside | 7928 | inside exon | 0 | 4 | 4 | overlaps 3'UTR |
|
8697 | 7971 | 0.37 | FALSE |
| 337 | chr18 | 70993301 | 70993455 | 155 |
|
39.74967 | 6161.199 | 5723739 | 5723893 | 6 | 3341 | 7077.031 | 1.745793e+04 | 4.836129e+01 | 1.787757e+04 | 0.000000e+00 | 1.293548e+00 | -8.495814e+00 | 3.426880e-02 | -1.000000e+100 | -1.372026e+01 | 0.1086034 | FALSE | 0.5228326 | FALSE | LOC100505817 | NR_038340 | NA | NA | 0 | NA | NA | NA | 3 | NA |
|
0 | 0 | 0.37 | FALSE |
| 338 | chr16 | 68855904 | 68856128 | 225 |
|
27.37924 | 6160.330 | 8970410 | 8970634 | 17 | 4342 | 2480.101 | 5.201678e+03 | 4.483111e+03 | 2.713589e+03 | 0.000000e+00 | 2.128889e+00 | -2.144768e-01 | -9.387749e-01 | -1.000000e+100 | -1.125466e+01 | 0.1086034 | FALSE | 0.5228326 | FALSE | CDH1 | NM_004360 NP_004351 | NA | NA | 0 | NA | NA | NA | 15 | NA |
|
0 | 0 | 0.37 | FALSE |
| 339 | chr12 | 10488210 | 10488429 | 220 |
|
27.99973 | 6159.941 | 2151551 | 2151770 | 7 | 3160 | 2157.143 | 6.830311e+03 | 1.191591e+01 | 3.943277e+03 | 0.000000e+00 | 2.113636e-01 | -9.162918e+00 | -7.925562e-01 | -1.000000e+100 | -1.497994e+01 | 0.1086813 | FALSE | 0.5228326 | FALSE | KLRD1 | NM_001114396 NM_002262 NM_007334 NP_001107868 NP_002253 NP_031360 XM_005253363 XM_006719065 XM_006719066 XM_006719067 XM_006719068 XP_005253420 XP_006719128 XP_006719129 XP_006719130 XP_006719131 | downstream | downstream | 31160 | NA | NA | NA | 7 | NA |
|
12800 | 6715 | 0.37 | FALSE |
| 340 | chr20 | 12325202 | 12325404 | 203 |
|
30.30873 | 6152.673 | 1422678 | 1422880 | 2 | 4153 | 2824.401 | 1.028564e+04 | 8.325123e-01 | 3.831702e+03 | 1.320197e+00 | 2.512315e+00 | -1.359280e+01 | -1.424574e+00 | -1.292759e+01 | -1.199933e+01 | 0.1089147 | FALSE | 0.5228326 | FALSE | BTBD3 | NM_001282550 NM_001282551 NM_001282552 NM_001282554 NM_014962 NM_181443 NP_001269479 NP_001269480 NP_001269481 NP_001269483 NP_055777 NP_852108 XM_006723550 XM_006723551 XP_006723613 XP_006723614 | downstream | downstream | 453725 | NA | NA | NA | 5 | NA |
|
35766 | 5207 | 0.37 | FALSE |
| 341 | chr1 | 5178186 | 5178353 | 168 |
|
36.57967 | 6145.385 | 1270086 | 1270253 | 4 | 2608 | 5253.800 | 1.803190e+04 | 2.303869e+01 | 8.213179e+03 | 2.767857e-01 | 6.011905e-01 | -9.612277e+00 | -1.134539e+00 | -1.599142e+01 | -1.487237e+01 | 0.1090704 | FALSE | 0.5228326 | FALSE | AJAP1 | NM_001042478 NM_018836 NP_001035943 NP_061324 | downstream | downstream | 463081 | NA | NA | NA | 6 | NA |
|
128746 | 119073 | 0.37 | FALSE |
| 342 | chr13 | 43446726 | 43446921 | 196 |
|
31.27110 | 6129.136 | 2784915 | 2785110 | 5 | 6717 | 2870.069 | 9.082577e+03 | 1.852041e+00 | 5.265041e+03 | 0.000000e+00 | 8.775510e-01 | -1.225977e+01 | -7.866569e-01 | -1.000000e+100 | -1.333733e+01 | 0.1094595 | FALSE | 0.5228326 | FALSE | EPSTI1 | NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959 | downstream | downstream | 119486 | NA | NA | NA | 13 | NA |
|
105883 | 103915 | 0.37 | FALSE |
| 343 | chr6 | 154244992 | 154245172 | 181 |
|
33.79692 | 6117.243 | 15904096 | 15904276 | 46 | 2464 | 4876.046 | 1.109669e+04 | 3.976519e+01 | 1.323442e+04 | 1.080110e+00 | 8.276243e+00 | -8.124408e+00 | 2.541655e-01 | -1.332666e+01 | -1.038887e+01 | 0.1097708 | FALSE | 0.5228326 | FALSE | OPRM1 | NM_000914 NM_001008503 NM_001008504 NM_001008505 NM_001145279 NM_001145280 NM_001145281 NM_001145282 NM_001145283 NM_001145284 NM_001145285 NM_001145286 NM_001145287 NM_001285522 NM_001285523 NM_001285524 NM_001285526 NM_001285527 NM_001285528 NP_000905 NP_001008503 NP_001008504 NP_001008505 NP_001138751 NP_001138752 NP_001138753 NP_001138754 NP_001138755 NP_001138756 NP_001138757 NP_001138758 NP_001138759 NP_001272451 NP_001272452 NP_001272453 NP_001272455 NP_001272456 NP_001272457 NR_104348 NR_104349 NR_104350 NR_104351 XM_006715496 XM_006715497 XP_006715559 XP_006715560 | upstream | upstream | 86459 | NA | NA | NA | 3 | NA |
|
79682 | 79168 | 0.37 | FALSE |
| 344 | chr9 | 90029157 | 90029333 | 177 |
|
34.47929 | 6102.834 | 8214874 | 8215050 | 12 | 5446 | 4191.951 | 1.553952e+04 | 1.000565e+01 | 5.409088e+03 | 2.853107e-01 | 8.559322e-01 | -1.060091e+01 | -1.522485e+00 | -1.573305e+01 | -1.414809e+01 | 0.1100821 | FALSE | 0.5228326 | FALSE | DAPK1 | NM_001288729 NM_001288730 NM_001288731 NM_004938 NP_001275658 NP_001275659 NP_001275660 NP_004929 XM_005251757 XM_006716988 XP_005251814 XP_006717051 | upstream | upstream | 83325 | NA | NA | NA | 26 | NA |
|
210891 | 208286 | 0.37 | FALSE |
| 345 | chrX | 113837297 | 113837467 | 171 |
|
35.67135 | 6099.801 | 9204395 | 9204565 | 25 | 4367 | 4455.802 | 1.733770e+04 | 0.000000e+00 | 4.941316e+03 | 0.000000e+00 | 0.000000e+00 | -1.000000e+100 | -1.810945e+00 | -1.000000e+100 | -1.000000e+100 | 0.1102378 | FALSE | 0.5228326 | FALSE | HTR2C | NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690 | inside intron | inside | 18746 | inside intron | 10806 | 2 | 7 | 5' UTR |
|
326073 | 180632 | 0.37 | FALSE |
| 346 | chr7 | 29825916 | 29826069 | 154 |
|
39.54689 | 6090.221 | 3480296 | 3480449 | 8 | 609 | 7050.423 | 1.726532e+04 | 4.788961e+01 | 1.793727e+04 | 0.000000e+00 | 1.626623e+00 | -8.493949e+00 | 5.508310e-02 | -1.000000e+100 | -1.337371e+01 | 0.1103934 | FALSE | 0.5228326 | FALSE | WIPF3 | NM_001080529 NP_001073998 XM_005249822 XP_005249879 | upstream | upstream | 20101 | NA | NA | NA | 9 | NA |
|
110512 | 79791 | 0.37 | FALSE |
| 347 | chr8 | 116228300 | 116228485 | 186 |
|
32.64586 | 6072.131 | 11017339 | 11017524 | 28 | 5526 | 3615.847 | 1.114512e+04 | 2.459677e+01 | 6.908000e+03 | 4.301075e-01 | 1.086021e+00 | -8.823728e+00 | -6.900726e-01 | -1.466136e+01 | -1.332507e+01 | 0.1109382 | FALSE | 0.5228326 | FALSE | TRPS1 | NM_001282902 NM_001282903 NM_014112 NP_001269831 NP_001269832 NP_054831 XM_005251049 XM_006716624 XM_006716625 XP_005251106 XP_006716687 XP_006716688 | downstream | downstream | 451749 | NA | NA | NA | 6 | NA |
|
259510 | 253859 | 0.37 | FALSE |
| 348 | chr16 | 65311430 | 65311630 | 201 |
|
30.17319 | 6064.812 | 8147361 | 8147561 | 12 | 2881 | 2906.350 | 1.006914e+04 | 9.355721e+00 | 4.450236e+03 | 0.000000e+00 | 3.014925e+00 | -1.007180e+01 | -1.177987e+00 | -1.000000e+100 | -1.170553e+01 | 0.1112495 | FALSE | 0.5228326 | FALSE | LINC00922 | NM_001101346 NR_027755 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.37 | FALSE |
| 349 | chr2 | 77315750 | 77315965 | 216 |
|
28.06435 | 6061.900 | 8903303 | 8903518 | 21 | 5816 | 2254.183 | 9.100931e+03 | 5.909722e+00 | 2.163840e+03 | 0.000000e+00 | 2.337963e-01 | -1.058871e+01 | -2.072420e+00 | -1.000000e+100 | -1.524847e+01 | 0.1112495 | FALSE | 0.5228326 | FALSE | LRRTM4 | NM_001134745 NM_001282924 NM_001282928 NM_024993 NP_001128217 NP_001269853 NP_001269857 NP_079269 | inside intron | inside | 433537 | inside intron | 339708 | 4 | 4 | inside transcription region |
|
774652 | 772976 | 0.37 | FALSE |
| 350 | chrX | 4809733 | 4809917 | 185 |
|
32.73989 | 6056.880 | 715510 | 715694 | 3 | 5024 | 3858.363 | 1.143375e+04 | 2.324324e+01 | 7.831370e+03 | 4.918919e-01 | 2.964865e+00 | -8.942271e+00 | -5.459615e-01 | -1.450460e+01 | -1.191304e+01 | 0.1114829 | FALSE | 0.5228326 | FALSE | NLGN4X | NM_001282145 NM_001282146 NM_020742 NM_181332 NP_001269074 NP_001269075 NP_065793 NP_851849 XM_005274564 XM_005274565 XM_005274566 XM_005274568 XM_006724504 XP_005274621 XP_005274622 XP_005274623 XP_005274625 XP_006724567 | downstream | downstream | 1259895 | NA | NA | NA | 6 | NA |
|
261729 | 258649 | 0.37 | FALSE |
| 351 | chr12 | 4130307 | 4130497 | 191 |
|
31.69609 | 6053.953 | 672283 | 672473 | 1 | 3325 | 3694.646 | 1.084864e+04 | 1.985079e+01 | 7.596987e+03 | 5.641361e+00 | 2.104712e+00 | -9.094103e+00 | -5.140155e-01 | -1.090918e+01 | -1.233160e+01 | 0.1116386 | FALSE | 0.5228326 | FALSE | PARP11 | NM_001286521 NM_001286522 NM_020367 NP_001273450 NP_001273451 NP_065100 NR_104461 XM_005253710 XM_005253711 XM_005253714 XM_006718987 XP_005253767 XP_005253768 XP_005253771 XP_006719050 | upstream | upstream | 147699 | NA | NA | NA | 8 | NA |
|
64581 | 61106 | 0.37 | FALSE |
| 352 | chr3 | 3887161 | 3887397 | 237 |
|
25.26798 | 5988.511 | 169545 | 169781 | 2 | 376 | 6194.959 | 9.405711e+03 | 1.159832e+04 | 2.082920e+03 | 0.000000e+00 | 7.887848e+03 | 3.023068e-01 | -2.174930e+00 | -1.000000e+100 | -2.539052e-01 | 0.1140511 | FALSE | 0.5228326 | FALSE | LRRN1 | NM_020873 NP_065924 XM_005265351 XP_005265408 | inside exon | inside | 46040 | inside exon | 0 | 2 | 2 | inside transcription region |
|
48266 | 2150 | 0.37 | FALSE |
| 353 | chr13 | 56618327 | 56618504 | 178 |
|
33.61676 | 5983.783 | 4571380 | 4571557 | 14 | 3475 | 3799.281 | 1.521892e+04 | 1.325843e+00 | 3.775596e+03 | 0.000000e+00 | 5.589888e-01 | -1.348667e+01 | -2.011090e+00 | -1.000000e+100 | -1.473269e+01 | 0.1140511 | FALSE | 0.5228326 | FALSE | MIR5007 | NR_049804 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.37 | FALSE |
| 354 | chr4 | 120919658 | 120919893 | 236 |
|
25.24083 | 5956.835 | 11516378 | 11516613 | 33 | 5835 | 1636.747 | 6.410218e+03 | 1.671610e+00 | 1.771845e+03 | 0.000000e+00 | 0.000000e+00 | -1.190492e+01 | -1.855121e+00 | -1.000000e+100 | -1.000000e+100 | 0.1149072 | FALSE | 0.5228326 | FALSE | MAD2L1 | NM_002358 NP_002349 | downstream | downstream | 68120 | NA | NA | NA | 5 | NA |
|
7434 | 6616 | 0.37 | FALSE |
| 355 | chr5 | 120037272 | 120037491 | 220 |
|
27.05616 | 5952.356 | 11492478 | 11492697 | 19 | 4521 | 2021.181 | 8.267859e+03 | 1.002273e+00 | 1.836711e+03 | 2.295455e-01 | 1.022727e-01 | -1.301002e+01 | -2.170389e+00 | -1.513645e+01 | -1.630280e+01 | 0.1150628 | FALSE | 0.5228326 | FALSE | PRR16 | NM_016644 NP_057728 XM_005272010 XM_005272011 XM_005272012 XP_005272067 XP_005272068 XP_005272069 | downstream | downstream | 237253 | NA | NA | NA | 3 | NA |
|
222945 | 205505 | 0.37 | FALSE |
| 356 | chr6 | 87795968 | 87796152 | 185 |
|
31.98785 | 5917.752 | 9873626 | 9873810 | 15 | 2707 | 27548.750 | 0.000000e+00 | 1.377422e+05 | 4.675676e-01 | 1.081081e+00 | 0.000000e+00 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | NaN | 0.1161524 | FALSE | 0.5228326 | FALSE | CGA | NM_000735 NM_001252383 NP_000726 NP_001239312 | inside exon | inside | 8713 | inside exon | 0 | 4 | 5 | inside transcription region |
|
9649 | 2444 | 0.37 | FALSE |
| 357 | chrX | 86941117 | 86941305 | 189 |
|
31.30891 | 5917.384 | 6795391 | 6795579 | 11 | 4336 | 3101.047 | 1.099820e+04 | 7.304233e+00 | 4.499579e+03 | 0.000000e+00 | 1.560847e-01 | -1.055625e+01 | -1.289405e+00 | -1.000000e+100 | -1.610458e+01 | 0.1161524 | FALSE | 0.5228326 | FALSE | KLHL4 | NM_019117 NM_057162 NP_061990 NP_476503 | downstream | downstream | 168402 | NA | NA | NA | 11 | NA |
|
152335 | 148637 | 0.37 | FALSE |
| 358 | chr10 | 78581478 | 78581602 | 125 |
|
47.27973 | 5909.966 | 7905463 | 7905587 | 14 | 1989 | 10878.223 | 2.887283e+04 | 0.000000e+00 | 2.551828e+04 | 0.000000e+00 | 0.000000e+00 | -1.000000e+100 | -1.781813e-01 | -1.000000e+100 | -1.000000e+100 | 0.1162302 | FALSE | 0.5228326 | FALSE | KCNMA1 | NM_001014797 NM_001161352 NM_001161353 NM_001271518 NM_001271519 NM_001271520 NM_001271521 NM_001271522 NM_002247 NP_001014797 NP_001154824 NP_001154825 NP_001258447 NP_001258448 NP_001258449 NP_001258450 NP_001258451 NP_002238 XM_005269776 XM_005269778 XM_005269779 XM_005269780 XM_005269781 XM_005269785 XM_005269787 XM_005269789 XM_005269792 XM_005269795 XM_005269796 XM_005269797 XM_005269800 XM_005269801 XM_005269803 XM_005269804 XM_006717821 XM_006717822 XM_006717823 XM_006717824 XM_006717825 XM_006717826 XM_006717827 XM_006717828 XM_006717829 XM_006717830 XP_005269833 XP_005269835 XP_005269836 XP_005269837 XP_005269838 XP_005269842 XP_005269844 XP_005269846 XP_005269849 XP_005269852 XP_005269853 XP_005269854 XP_005269857 XP_005269858 XP_005269860 XP_005269861 XP_006717884 XP_006717885 XP_006717886 XP_006717887 XP_006717888 XP_006717889 XP_006717890 XP_006717891 XP_006717892 XP_006717893 | downstream | downstream | 815975 | NA | NA | NA | 29 | NA |
|
768218 | 759773 | 0.37 | FALSE |
| 359 | chr1 | 229313085 | 229313237 | 153 |
|
38.60412 | 5906.430 | 29953118 | 29953270 | 45 | 5451 | 6771.861 | 1.842013e+04 | 2.840196e+01 | 1.540186e+04 | 6.973856e+00 | 1.934640e+00 | -9.341077e+00 | -2.581785e-01 | -1.136704e+01 | -1.321693e+01 | 0.1164637 | FALSE | 0.5228326 | FALSE | RAB4A | NM_001271998 NM_004578 NP_001258927 NP_004569 NR_073545 | upstream | upstream | 93572 | NA | NA | NA | 8 | NA |
|
34831 | 31637 | 0.37 | FALSE |
| 360 | chr14 | 29237250 | 29237481 | 232 |
|
25.38540 | 5889.413 | 1313818 | 1314049 | 1 | 1760 | 2498.165 | 7.025862e+00 | 8.965517e-01 | 6.614224e+00 | 0.000000e+00 | 1.247629e+04 | -2.970216e+00 | -8.710330e-02 | -1.000000e+100 | 1.079423e+01 | 0.1165415 | FALSE | 0.5228326 | FALSE | FOXG1 | NM_005249 NP_005240 | inside exon | inside | 972 | inside exon | 0 | 1 | 1 | inside transcription region |
|
3205 | 1469 | 0.37 | FALSE |
| 361 | chrX | 113837513 | 113837700 | 188 |
|
31.30240 | 5884.851 | 9204611 | 9204798 | 25 | 4367 | 3305.740 | 8.793920e+03 | 2.366223e+01 | 7.709165e+03 | 1.327128e+00 | 6.276596e-01 | -8.537776e+00 | -1.899319e-01 | -1.269398e+01 | -1.377424e+01 | 0.1165415 | FALSE | 0.5228326 | FALSE | HTR2C | NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690 | inside intron | inside | 18962 | inside intron | 10573 | 2 | 7 | 5' UTR |
|
326073 | 180632 | 0.37 | FALSE |
| 362 | chr13 | 41734169 | 41734327 | 159 |
|
36.90338 | 5867.638 | 2522948 | 2523106 | 4 | 159 | 5280.443 | 1.463327e+04 | 4.698113e+00 | 1.176019e+04 | 1.144654e+00 | 2.902516e+00 | -1.160488e+01 | -3.153406e-01 | -1.364205e+01 | -1.229966e+01 | 0.1173197 | FALSE | 0.5228326 | FALSE | KBTBD6 | NM_152903 NP_690867 | upstream | upstream | 27233 | NA | NA | NA | 1 | NA |
|
5227 | 2024 | 0.37 | FALSE |
| 363 | chr8 | 72589947 | 72590128 | 182 |
|
32.20559 | 5861.417 | 7345993 | 7346174 | 11 | 5162 | 3694.499 | 1.169978e+04 | 1.464011e+01 | 6.748758e+03 | 7.376374e+00 | 1.942308e+00 | -9.642339e+00 | -7.937875e-01 | -1.063128e+01 | -1.255642e+01 | 0.1173976 | FALSE | 0.5228326 | FALSE | MSC | NM_005098 NP_005089 | downstream | downstream | 166603 | NA | NA | NA | 2 | NA |
|
2954 | 1517 | 0.37 | FALSE |
| 364 | chr6 | 102553025 | 102553194 | 170 |
|
34.35293 | 5839.999 | 11178724 | 11178893 | 21 | 170 | 4660.791 | 1.341037e+04 | 8.705882e-01 | 9.878121e+03 | 0.000000e+00 | 1.458824e+01 | -1.391100e+01 | -4.410409e-01 | -1.000000e+100 | -9.844328e+00 | 0.1183315 | FALSE | 0.5228326 | FALSE | GRIK2 | NM_001166247 NM_021956 NM_175768 NP_001159719 NP_068775 NP_786944 XM_005266945 XM_005266946 XM_006715465 XP_005267002 XP_005267003 XP_006715528 | downstream | downstream | 706164 | NA | NA | NA | 17 | NA |
|
671097 | 664730 | 0.37 | FALSE |
| 365 | chr10 | 6672334 | 6672532 | 199 |
|
29.32956 | 5836.582 | 801663 | 801861 | 2 | 366 | 2645.096 | 9.621352e+03 | 5.243719e+00 | 3.593673e+03 | 1.248744e+00 | 3.962312e+00 | -1.084143e+01 | -1.420780e+00 | -1.291155e+01 | -1.124568e+01 | 0.1183315 | FALSE | 0.5228326 | FALSE | PRKCQ-AS1 | NR_036502 NR_036503 | NA | NA | 0 | NA | NA | NA | 2 | NA |
|
0 | 0 | 0.37 | FALSE |
| 366 | chr10 | 98494765 | 98494935 | 171 |
|
34.11354 | 5833.415 | 10321545 | 10321715 | 19 | 2724 | 4393.737 | 1.166709e+04 | 2.680994e+01 | 1.026886e+04 | 3.608187e+00 | 2.312866e+00 | -8.765461e+00 | -1.841685e-01 | -1.165888e+01 | -1.230048e+01 | 0.1184093 | FALSE | 0.5228326 | FALSE | PIK3AP1 | NM_152309 NP_689522 XM_005269498 XM_005269499 XP_005269555 XP_005269556 | upstream | upstream | 14486 | NA | NA | NA | 17 | NA |
|
127210 | 124817 | 0.37 | FALSE |
| 367 | chr5 | 153857547 | 153857760 | 214 |
|
27.23742 | 5828.809 | 16166371 | 16166584 | 37 | 3153 | 13225.324 | 0.000000e+00 | 6.608803e+04 | 3.417991e+01 | 4.413551e+00 | 0.000000e+00 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | NaN | 0.1184871 | FALSE | 0.5228326 | FALSE | HAND1 | NM_004821 NP_004812 XM_005268531 XP_005268588 | inside exon | inside | 64 | inside exon | 0 | 1 | 2 | overlaps 5' UTR |
|
3292 | 2202 | 0.37 | FALSE |
| 368 | chr9 | 82755572 | 82755733 | 162 |
|
35.91850 | 5818.798 | 7525850 | 7526011 | 7 | 4979 | 4942.780 | 1.831173e+04 | 6.030864e+00 | 6.392636e+03 | 5.462963e-01 | 2.956790e+00 | -1.156812e+01 | -1.518285e+00 | -1.503272e+01 | -1.259645e+01 | 0.1187984 | FALSE | 0.5228326 | FALSE | TLE4 | NM_001282748 NM_001282749 NM_001282753 NM_001282760 NM_007005 NP_001269677 NP_001269678 NP_001269682 NP_001269689 NP_008936 NR_104239 XM_005252167 XM_005252169 XM_005252173 XM_005252174 XM_005252175 XM_005252177 XM_006717264 XM_006717265 XM_006717266 XM_006717267 XM_006717268 XM_006717269 XM_006717270 XP_005252224 XP_005252226 XP_005252230 XP_005252231 XP_005252232 XP_005252234 XP_006717327 XP_006717328 XP_006717329 XP_006717330 XP_006717331 XP_006717332 XP_006717333 | downstream | downstream | 568694 | NA | NA | NA | 20 | NA |
|
154778 | 152353 | 0.37 | FALSE |
| 369 | chr8 | 105300727 | 105300918 | 192 |
|
30.18578 | 5795.670 | 10572767 | 10572958 | 23 | 1208 | 3439.143 | 1.062798e+04 | 1.895052e+01 | 6.532484e+03 | 6.197917e+00 | 1.010417e+01 | -9.131414e+00 | -7.021636e-01 | -1.074380e+01 | -1.003870e+01 | 0.1196545 | FALSE | 0.5228326 | FALSE | RIMS2 | NM_001100117 NM_001282881 NM_001282882 NM_014677 NP_001093587 NP_001269810 NP_001269811 NP_055492 XM_005251106 XM_005251107 XM_005251108 XM_006716690 XM_006716691 XM_006716692 XM_006716693 XM_006716694 XM_006716695 XM_006716696 XM_006716697 XM_006716698 XM_006716699 XP_005251163 XP_005251164 XP_005251165 XP_006716753 XP_006716754 XP_006716755 XP_006716756 XP_006716757 XP_006716758 XP_006716759 XP_006716760 XP_006716761 XP_006716762 | downstream | downstream | 787751 | NA | NA | NA | 24 | NA |
|
753680 | 750933 | 0.37 | FALSE |
| 370 | chr12 | 103619317 | 103619516 | 200 |
|
28.94893 | 5789.786 | 12176478 | 12176677 | 30 | 5060 | 2559.367 | 7.542958e+03 | 1.426750e+01 | 5.236470e+03 | 9.650000e-01 | 2.175000e+00 | -9.046254e+00 | -5.265357e-01 | -1.293231e+01 | -1.175990e+01 | 0.1201214 | FALSE | 0.5228326 | FALSE | C12orf42 | NM_001099336 NM_001278419 NM_001278420 NM_198521 NP_001092806 NP_001265348 NP_001265349 NP_940923 NR_103526 XM_006719377 XM_006719378 XM_006719379 XM_006719380 XM_006719381 XP_006719440 XP_006719441 XP_006719442 XP_006719443 XP_006719444 | NA | NA | 0 | NA | NA | NA | 11 | NA |
|
0 | 0 | 0.37 | FALSE |
| 371 | chr16 | 13448183 | 13448369 | 187 |
|
30.95187 | 5787.999 | 2742507 | 2742693 | 5 | 5109 | 2924.163 | 1.020403e+04 | 6.197861e+00 | 4.409061e+03 | 2.700535e-01 | 1.248663e+00 | -1.068508e+01 | -1.210596e+00 | -1.520554e+01 | -1.299647e+01 | 0.1201214 | FALSE | 0.5228326 | FALSE | SHISA9 | NM_001145204 NM_001145205 NP_001138676 NP_001138677 XM_005255539 XP_005255596 | downstream | downstream | 452706 | NA | NA | NA | 5 | NA |
|
338796 | 333344 | 0.37 | FALSE |
| 372 | chr20 | 38897799 | 38897950 | 152 |
|
38.06765 | 5786.283 | 4365491 | 4365642 | 10 | 5561 | 5468.214 | 1.937513e+04 | 6.279605e+00 | 7.959655e+03 | 0.000000e+00 | 0.000000e+00 | -1.159124e+01 | -1.283429e+00 | -1.000000e+100 | -1.000000e+100 | 0.1202771 | FALSE | 0.5228326 | FALSE | MAFB | NM_005461 NP_005452 | downstream | downstream | 419926 | NA | NA | NA | 1 | NA |
|
3359 | 971 | 0.37 | FALSE |
| 373 | chr1 | 5175933 | 5176108 | 176 |
|
32.73542 | 5761.433 | 1267930 | 1268105 | 4 | 2608 | 3883.953 | 9.661247e+03 | 2.821591e+01 | 9.727415e+03 | 6.789773e-01 | 2.210227e+00 | -8.419557e+00 | 9.847000e-03 | -1.379656e+01 | -1.209380e+01 | 0.1206662 | FALSE | 0.5228326 | FALSE | AJAP1 | NM_001042478 NM_018836 NP_001035943 NP_061324 | downstream | downstream | 460828 | NA | NA | NA | 6 | NA |
|
128746 | 119073 | 0.37 | FALSE |
| 374 | chr1 | 222141921 | 222142091 | 171 |
|
33.64348 | 5753.036 | 28565171 | 28565341 | 39 | 8614 | 4437.965 | 1.061941e+04 | 4.036257e+01 | 1.152447e+04 | 8.859649e-01 | 4.690059e+00 | -8.039470e+00 | 1.179969e-01 | -1.354909e+01 | -1.114481e+01 | 0.1208996 | FALSE | 0.5228326 | FALSE | DUSP10 | NM_007207 NM_144728 NM_144729 NP_009138 NP_653329 NP_653330 | upstream | upstream | 226405 | NA | NA | NA | 4 | NA |
|
40752 | 37332 | 0.37 | FALSE |
| 375 | chr2 | 67561108 | 67561300 | 193 |
|
29.78501 | 5748.507 | 7285920 | 7286112 | 17 | 8129 | 3114.635 | 1.349632e+04 | 6.772021e+00 | 2.063301e+03 | 2.435233e-01 | 6.536269e+00 | -1.096069e+01 | -2.709541e+00 | -1.575815e+01 | -1.101181e+01 | 0.1209775 | FALSE | 0.5228326 | FALSE | ETAA1 | NM_019002 NP_061875 XM_005264374 XM_005264375 XM_005264376 XM_005264377 XM_005264378 XP_005264431 XP_005264432 XP_005264433 XP_005264434 XP_005264435 | upstream | upstream | 63142 | NA | NA | NA | 6 | NA |
|
13091 | 12589 | 0.37 | FALSE |
| 376 | chr6 | 132241498 | 132241700 | 203 |
|
28.18895 | 5722.356 | 13988901 | 13989103 | 42 | 1116 | 2152.160 | 7.555746e+03 | 0.000000e+00 | 3.205052e+03 | 0.000000e+00 | 0.000000e+00 | -1.000000e+100 | -1.237227e+00 | -1.000000e+100 | -1.000000e+100 | 0.1216779 | FALSE | 0.5228326 | FALSE | ENPP1 | NM_006208 NP_006199 XM_005267017 XP_005267074 | downstream | downstream | 112342 | NA | NA | NA | 25 | NA |
|
87139 | 82475 | 0.37 | FALSE |
| 377 | chr15 | 35084291 | 35084482 | 192 |
|
29.77303 | 5716.422 | 1976446 | 1976637 | 1 | 5287 | 12643.445 | 2.973151e+02 | 5.862440e+04 | 3.919078e+03 | 1.893229e+00 | 3.745417e+02 | 7.623365e+00 | 3.720450e+00 | -7.295000e+00 | 3.331335e-01 | 0.1216779 | FALSE | 0.5228326 | FALSE | ACTC1 | NM_005159 NP_005150 | inside exon | inside | 3445 | inside exon | 0 | 5 | 7 | inside transcription region |
|
7630 | 4396 | 0.37 | FALSE |
| 378 | chr7 | 42914506 | 42914680 | 175 |
|
32.57655 | 5700.896 | 4866675 | 4866849 | 11 | 3821 | 3807.730 | 1.213130e+04 | 5.225714e+00 | 6.890551e+03 | 1.791429e+00 | 9.780000e+00 | -1.118082e+01 | -8.160428e-01 | -1.272534e+01 | -1.027661e+01 | 0.1220670 | FALSE | 0.5228326 | FALSE | C7orf25 | NM_001099858 NM_024054 NP_001093328 NP_076959 XM_005249844 XP_005249901 | downstream | downstream | 37471 | NA | NA | NA | 2 | NA |
|
3279 | 2432 | 0.37 | FALSE |
| 379 | chr15 | 89092289 | 89092459 | 171 |
|
33.28940 | 5692.487 | 10166746 | 10166916 | 9 | 3260 | 4087.679 | 9.378023e+03 | 3.519006e+01 | 1.102375e+04 | 2.777778e-01 | 1.149123e+00 | -8.057972e+00 | 2.332599e-01 | -1.504307e+01 | -1.299454e+01 | 0.1225340 | FALSE | 0.5228326 | FALSE | DET1 | NM_001144074 NM_017996 NP_001137546 NP_060466 NR_026645 XM_006720597 XM_006720598 XM_006720599 XP_006720660 XP_006720661 XP_006720662 XR_429461 | NA | NA | 0 | NA | NA | NA | 7 | NA |
|
0 | 0 | 0.37 | FALSE |
| 380 | chr8 | 42038008 | 42038203 | 196 |
|
28.95237 | 5674.665 | 4923041 | 4923236 | 7 | 17976 | 6637.776 | 9.553827e+01 | 3.807398e+01 | 3.372194e+01 | 3.296916e+04 | 5.238520e+01 | -1.327273e+00 | -1.502391e+00 | 8.430823e+00 | -8.669193e-01 | 0.1233122 | FALSE | 0.5228326 | FALSE | PLAT | NM_000930 NM_000931 NM_033011 NP_000921 NP_127509 | inside exon | inside | 26991 | inside exon | 0 | 7 | 11 | inside transcription region |
|
32958 | 17192 | 0.37 | FALSE |
| 381 | chr8 | 80301311 | 80301482 | 172 |
|
32.98307 | 5673.087 | 7970928 | 7971099 | 16 | 1972 | 4961.672 | 1.170143e+04 | 6.232267e+01 | 1.303610e+04 | 2.936047e-01 | 8.209302e+00 | -7.552712e+00 | 1.558276e-01 | -1.528245e+01 | -1.047714e+01 | 0.1234678 | FALSE | 0.5228326 | FALSE | STMN2 | NM_001199214 NM_007029 NP_001186143 NP_008960 XM_005251142 XP_005251199 | upstream | upstream | 221567 | NA | NA | NA | 5 | NA |
|
55361 | 53678 | 0.37 | FALSE |
| 382 | chr6 | 121944129 | 121944304 | 176 |
|
32.16015 | 5660.187 | 13049587 | 13049762 | 26 | 2940 | 3545.702 | 1.113986e+04 | 9.477273e+00 | 6.573835e+03 | 2.869318e-01 | 5.048296e+00 | -1.019897e+01 | -7.609240e-01 | -1.524466e+01 | -1.110765e+01 | 0.1239348 | FALSE | 0.5228326 | FALSE | GJA1 | NM_000165 NP_000156 | downstream | downstream | 187384 | NA | NA | NA | 2 | NA |
|
14128 | 1148 | 0.37 | FALSE |
| 383 | chr6 | 14299158 | 14299313 | 156 |
|
36.27233 | 5658.484 | 1530612 | 1530767 | 3 | 3927 | 5258.171 | 1.285366e+04 | 4.719872e+01 | 1.338945e+04 | 0.000000e+00 | 5.480769e-01 | -8.089216e+00 | 5.891660e-02 | -1.000000e+100 | -1.451744e+01 | 0.1240126 | FALSE | 0.5228326 | FALSE | CD83 | NM_001040280 NM_001251901 NM_004233 NP_001035370 NP_001238830 NP_004224 | downstream | downstream | 181671 | NA | NA | NA | 5 | NA |
|
19661 | 3692 | 0.37 | FALSE |
| 384 | chr1 | 229315383 | 229315563 | 181 |
|
31.26064 | 5658.175 | 29955416 | 29955596 | 45 | 5451 | 4326.381 | 1.169653e+04 | 6.288674e+01 | 9.849663e+03 | 3.906077e+00 | 1.891436e+01 | -7.539109e+00 | -2.479347e-01 | -1.154807e+01 | -9.272383e+00 | 0.1240904 | FALSE | 0.5228326 | FALSE | RAB4A | NM_001271998 NM_004578 NP_001258927 NP_004569 NR_073545 | upstream | upstream | 91246 | NA | NA | NA | 8 | NA |
|
34831 | 31637 | 0.37 | FALSE |
| 385 | chr2 | 5143694 | 5143878 | 185 |
|
30.52218 | 5646.603 | 426617 | 426801 | 1 | 5646 | 3486.958 | 1.068073e+04 | 1.497027e+01 | 6.724297e+03 | 6.540540e+00 | 8.254054e+00 | -9.478694e+00 | -6.675548e-01 | -1.067331e+01 | -1.033762e+01 | 0.1247908 | FALSE | 0.5228326 | FALSE | AC022311.1 | NR_034134 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.37 | FALSE |
| 386 | chr2 | 118036368 | 118036562 | 195 |
|
28.84851 | 5625.460 | 13417181 | 13417375 | 26 | 4821 | 2621.685 | 8.541479e+03 | 1.132564e+01 | 4.551323e+03 | 1.197436e+00 | 3.100000e+00 | -9.558749e+00 | -9.082000e-01 | -1.280032e+01 | -1.142800e+01 | 0.1259582 | FALSE | 0.5228326 | FALSE | DDX18 | NM_006773 NP_006764 | upstream | upstream | 535693 | NA | NA | NA | 14 | NA |
|
17698 | 15946 | 0.37 | FALSE |
| 387 | chr4 | 1164190 | 1164364 | 175 |
|
32.03365 | 5605.889 | 493162 | 493336 | 1 | 5842 | 8502.821 | 3.876286e+01 | 1.476714e+02 | 1.445714e+00 | 4.225915e+04 | 6.707143e+01 | 1.929644e+00 | -4.744821e+00 | 1.009037e+01 | 7.910234e-01 | 0.1268921 | FALSE | 0.5228326 | FALSE | SPON2 | NM_001128325 NM_001199021 NM_012445 NP_001121797 NP_001185950 NP_036577 | inside exon | inside | 910 | inside exon | 0 | 2 | 2 | overlaps 3'UTR |
|
4551 | 887 | 0.37 | FALSE |
| 388 | chr8 | 114523522 | 114523688 | 167 |
|
33.56491 | 5605.340 | 10924227 | 10924393 | 24 | 2224 | 4283.649 | 9.815883e+03 | 6.167066e+01 | 1.153924e+04 | 2.544910e-01 | 1.194611e+00 | -7.314390e+00 | 2.333582e-01 | -1.523522e+01 | -1.300436e+01 | 0.1268921 | FALSE | 0.5228326 | FALSE | CSMD3 | NM_052900 NM_198123 NM_198124 NP_443132 NP_937756 NP_937757 | upstream | upstream | 74280 | NA | NA | NA | 71 | NA |
|
1214083 | 1212083 | 0.37 | FALSE |
| 389 | chr6 | 114749215 | 114749356 | 142 |
|
39.30491 | 5581.297 | 12445900 | 12446041 | 23 | 5713 | 5728.489 | 1.519270e+04 | 6.549296e-01 | 1.344901e+04 | 0.000000e+00 | 7.746480e-02 | -1.450168e+01 | -1.758779e-01 | -1.000000e+100 | -1.758141e+01 | 0.1280595 | FALSE | 0.5228326 | FALSE | HS3ST5 | NM_153612 NP_705840 XM_006715379 XP_006715442 | upstream | upstream | 85675 | NA | NA | NA | 5 | NA |
|
286790 | 5588 | 0.37 | FALSE |
| 390 | chr11 | 94389085 | 94389298 | 214 |
|
26.03156 | 5570.753 | 12612122 | 12612335 | 19 | 6962 | 1890.846 | 3.717811e+03 | 2.719626e+00 | 5.732231e+03 | 1.467290e+00 | 0.000000e+00 | -1.041683e+01 | 6.246435e-01 | -1.130708e+01 | -1.000000e+100 | 0.1285264 | FALSE | 0.5228326 | FALSE | PIWIL4 | NM_152431 NP_689644 | NA | NA | 0 | NA | NA | NA | 19 | NA |
|
0 | 0 | 0.37 | FALSE |
| 391 | chr9 | 118602191 | 118602351 | 161 |
|
34.58673 | 5568.464 | 12090487 | 12090647 | 19 | 2207 | 4490.166 | 1.538543e+04 | 9.531056e+00 | 7.048988e+03 | 2.944099e+00 | 3.944099e+00 | -1.065664e+01 | -1.126076e+00 | -1.235145e+01 | -1.192958e+01 | 0.1286820 | FALSE | 0.5228326 | FALSE | LINC00474 | NM_021208 NR_024032 | NA | NA | 0 | NA | NA | NA | 3 | NA |
|
0 | 0 | 0.37 | FALSE |
| 392 | chr14 | 101195273 | 101195403 | 131 |
|
42.44895 | 5560.813 | 9357775 | 9357905 | 17 | 8209 | 16918.142 | 7.465649e+00 | 3.335496e+01 | 5.076336e+00 | 9.075992e+02 | 8.363721e+04 | 2.159562e+00 | -5.564801e-01 | 6.925644e+00 | 1.345159e+01 | 0.1292268 | FALSE | 0.5228326 | FALSE | DLK1 | NM_001032997 NM_003836 NP_003827 | inside exon | inside | 2071 | inside exon | 0 | 3 | 5 | inside transcription region |
|
8265 | 7827 | 0.37 | FALSE |
| 393 | chr9 | 82756102 | 82756264 | 163 |
|
34.04253 | 5548.932 | 7526370 | 7526532 | 7 | 4979 | 4672.354 | 9.387334e+03 | 4.107055e+01 | 1.393216e+04 | 0.000000e+00 | 1.208589e+00 | -7.836467e+00 | 5.696311e-01 | -1.000000e+100 | -1.292318e+01 | 0.1301607 | FALSE | 0.5228326 | FALSE | TLE4 | NM_001282748 NM_001282749 NM_001282753 NM_001282760 NM_007005 NP_001269677 NP_001269678 NP_001269682 NP_001269689 NP_008936 NR_104239 XM_005252167 XM_005252169 XM_005252173 XM_005252174 XM_005252175 XM_005252177 XM_006717264 XM_006717265 XM_006717266 XM_006717267 XM_006717268 XM_006717269 XM_006717270 XP_005252224 XP_005252226 XP_005252230 XP_005252231 XP_005252232 XP_005252234 XP_006717327 XP_006717328 XP_006717329 XP_006717330 XP_006717331 XP_006717332 XP_006717333 | downstream | downstream | 569224 | NA | NA | NA | 20 | NA |
|
154778 | 152353 | 0.37 | FALSE |
| 394 | chr19 | 43829717 | 43829874 | 158 |
|
35.06584 | 5540.403 | 10852344 | 10852501 | 5 | 1755 | 4553.887 | 1.725897e+04 | 1.575316e+01 | 5.494392e+03 | 0.000000e+00 | 3.196203e-01 | -1.009749e+01 | -1.651315e+00 | -1.000000e+100 | -1.572063e+01 | 0.1306277 | FALSE | 0.5228326 | FALSE | PRG1 | NR_026881 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.37 | FALSE |
| 395 | chr8 | 133093004 | 133093144 | 141 |
|
39.27606 | 5537.925 | 12338812 | 12338952 | 37 | 5510 | 5843.170 | 1.809327e+04 | 2.365248e+00 | 1.112022e+04 | 0.000000e+00 | 0.000000e+00 | -1.290117e+01 | -7.022683e-01 | -1.000000e+100 | -1.000000e+100 | 0.1308611 | FALSE | 0.5228326 | FALSE | HHLA1 | NM_001145095 NM_005712 NP_001138567 | inside intron | inside | 24368 | inside intron | 791 | 10 | 16 | inside transcription region |
|
43779 | 41270 | 0.37 | FALSE |
| 396 | chr11 | 23205922 | 23206063 | 142 |
|
38.95628 | 5531.792 | 3673972 | 3674113 | 7 | 2401 | 5865.489 | 2.266660e+04 | 4.457746e+00 | 6.656039e+03 | 3.556338e-01 | 0.000000e+00 | -1.231197e+01 | -1.767832e+00 | -1.595982e+01 | -1.000000e+100 | 0.1313281 | FALSE | 0.5228326 | FALSE | CCDC179 | NM_001195637 NP_001182566 | upstream | upstream | 323950 | NA | NA | NA | 4 | NA |
|
13504 | 12911 | 0.37 | FALSE |
| 397 | chr1 | 222149351 | 222149506 | 156 |
|
35.41980 | 5525.489 | 28571844 | 28571999 | 39 | 8614 | 4959.188 | 1.126186e+04 | 5.209936e+01 | 1.348045e+04 | 3.237179e-01 | 1.201923e+00 | -7.755964e+00 | 2.594235e-01 | -1.508635e+01 | -1.319381e+01 | 0.1317172 | FALSE | 0.5228326 | FALSE | DUSP10 | NM_007207 NM_144728 NM_144729 NP_009138 NP_653329 NP_653330 | upstream | upstream | 233835 | NA | NA | NA | 4 | NA |
|
40752 | 37332 | 0.37 | FALSE |
| 398 | chr10 | 55927780 | 55927956 | 177 |
|
31.20864 | 5523.929 | 5619378 | 5619554 | 11 | 4015 | 3600.777 | 1.131420e+04 | 5.584746e+00 | 6.666545e+03 | 6.957627e+00 | 1.059887e+01 | -1.098436e+01 | -7.631231e-01 | -1.066725e+01 | -1.006001e+01 | 0.1317172 | FALSE | 0.5228326 | FALSE | PCDH15 | NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056 NP_001136235 NP_001136236 NP_001136237 NP_001136238 NP_001136239 NP_001136240 NP_001136241 NP_001136242 NP_001136243 NP_001136244 NP_001136245 NP_149045 XM_006717950 XP_006718013 | inside intron | inside | 633095 | inside intron | 14727 | 14 | 21 | inside transcription region |
|
806711 | 668631 | 0.37 | FALSE |
| 399 | chr8 | 115258351 | 115258532 | 182 |
|
30.31580 | 5517.475 | 10960559 | 10960740 | 25 | 3330 | 2899.479 | 9.817486e+03 | 5.478022e+00 | 4.671978e+03 | 5.549451e-01 | 1.895604e+00 | -1.080748e+01 | -1.071320e+00 | -1.411072e+01 | -1.233848e+01 | 0.1321841 | FALSE | 0.5228326 | FALSE | CSMD3 | NM_052900 NM_198123 NM_198124 NP_443132 NP_937756 NP_937757 | upstream | upstream | 809109 | NA | NA | NA | 71 | NA |
|
1214083 | 1212083 | 0.37 | FALSE |
| 400 | chr16 | 9765342 | 9765536 | 195 |
|
28.28981 | 5516.512 | 2218809 | 2219003 | 4 | 8636 | 2806.145 | 1.362730e+04 | 0.000000e+00 | 4.034205e+02 | 0.000000e+00 | 0.000000e+00 | -1.000000e+100 | -5.078072e+00 | -1.000000e+100 | -1.000000e+100 | 0.1322620 | FALSE | 0.5228326 | FALSE | GRIN2A | NM_000833 NM_001134407 NM_001134408 NP_000824 NP_001127879 NP_001127880 XM_005255267 XM_005255268 XP_005255324 XP_005255325 | downstream | downstream | 510727 | NA | NA | NA | 13 | NA |
|
428998 | 417262 | 0.37 | FALSE |
| 401 | chr2 | 189868708 | 189868869 | 162 |
|
34.02450 | 5511.969 | 20135000 | 20135161 | 41 | 27987 | 8314.170 | 1.256173e+00 | 5.983966e+03 | 0.000000e+00 | 3.558377e+04 | 1.858025e+00 | 1.221785e+01 | -1.000000e+100 | 1.478990e+01 | 5.647347e-01 | 0.1324954 | FALSE | 0.5228326 | FALSE | COL3A1 | NM_000090 NP_000081 | inside exon | inside | 29609 | inside exon | 0 | 39 | 51 | inside transcription region |
|
38373 | 37284 | 0.37 | FALSE |
| 402 | chr2 | 217538863 | 217539079 | 217 |
|
25.35771 | 5502.623 | 23439810 | 23440026 | 55 | 6953 | 5200.821 | 6.877189e+01 | 7.530316e+03 | 8.764977e+00 | 1.044418e+04 | 7.952067e+03 | 6.774748e+00 | -2.971997e+00 | 7.246665e+00 | 6.853367e+00 | 0.1328067 | FALSE | 0.5228326 | FALSE | IGFBP5 | NM_000599 NP_000590 | inside exon | inside | 21193 | inside exon | 0 | 4 | 4 | 3'UTR |
|
23444 | 18024 | 0.37 | FALSE |
| 403 | chr4 | 187168256 | 187168448 | 193 |
|
28.36132 | 5473.734 | 16449223 | 16449415 | 52 | 1412 | 2206.409 | 5.561756e+03 | 5.233161e-01 | 5.469764e+03 | 0.000000e+00 | 0.000000e+00 | -1.337557e+01 | -2.406190e-02 | -1.000000e+100 | -1.000000e+100 | 0.1335071 | FALSE | 0.5228326 | FALSE | KLKB1 | NM_000892 NP_000883 XM_005262987 XM_006714213 XP_005263044 XP_006714276 | inside intron | inside | 19584 | inside intron | 2949 | 8 | 15 | inside transcription region |
|
30953 | 25911 | 0.37 | FALSE |
| 404 | chr18 | 70994699 | 70994839 | 141 |
|
38.81802 | 5473.340 | 5725137 | 5725277 | 6 | 3341 | 6929.884 | 1.349547e+04 | 9.001418e+01 | 2.106358e+04 | 3.581560e-01 | 0.000000e+00 | -7.228107e+00 | 6.422755e-01 | -1.520153e+01 | -1.000000e+100 | 0.1335850 | FALSE | 0.5228326 | FALSE | LOC100505817 | NR_038340 | NA | NA | 0 | NA | NA | NA | 3 | NA |
|
0 | 0 | 0.37 | FALSE |
| 405 | chr19 | 47899819 | 47899970 | 152 |
|
35.93979 | 5462.848 | 12348424 | 12348575 | 7 | 152 | 5946.247 | 2.171366e+04 | 2.213816e+01 | 7.977839e+03 | 3.052632e+00 | 1.454276e+01 | -9.937852e+00 | -1.444533e+00 | -1.279626e+01 | -1.054409e+01 | 0.1339741 | FALSE | 0.5228326 | FALSE | MEIS3 | NM_001009813 NM_020160 NP_001009813 NP_064545 XM_005259086 XP_005259143 | downstream | downstream | 15674 | NA | NA | NA | 7 | NA |
|
9269 | 6127 | 0.37 | FALSE |
| 406 | chr14 | 51362264 | 51362422 | 159 |
|
34.31920 | 5456.753 | 3253047 | 3253205 | 10 | 2517 | 5144.687 | 1.192978e+04 | 3.491195e+01 | 1.374862e+04 | 1.238994e+00 | 8.880503e+00 | -8.416631e+00 | 2.047190e-01 | -1.323311e+01 | -1.039164e+01 | 0.1340519 | FALSE | 0.5228326 | FALSE | ABHD12B | NM_001206673 NM_181533 NM_181814 NP_001193602 NP_861535 XM_005267356 XM_005267357 XM_006720052 XP_005267413 XP_005267414 XP_006720115 | NA | NA | 0 | NA | NA | NA | 10 | NA |
|
0 | 0 | 0.37 | FALSE |
| 407 | chr5 | 121811798 | 121811988 | 191 |
|
28.51449 | 5446.268 | 11608094 | 11608284 | 21 | 3455 | 2332.750 | 7.863254e+03 | 6.910995e+00 | 3.792277e+03 | 0.000000e+00 | 1.308901e+00 | -1.015202e+01 | -1.052062e+00 | -1.000000e+100 | -1.255256e+01 | 0.1342076 | FALSE | 0.5228326 | FALSE | MGC32805 | NR_051996 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.37 | FALSE |
| 408 | chr6 | 94540571 | 94540739 | 169 |
|
32.16453 | 5435.806 | 10560048 | 10560216 | 18 | 3908 | 3454.909 | 1.114979e+04 | 2.668639e+00 | 6.117322e+03 | 1.177515e+00 | 3.585799e+00 | -1.202862e+01 | -8.660443e-01 | -1.320898e+01 | -1.160243e+01 | 0.1346745 | FALSE | 0.5228326 | FALSE | TSG1 | NR_015362 | NA | NA | 0 | NA | NA | NA | 10 | NA |
|
0 | 0 | 0.37 | FALSE |
| 409 | chr4 | 79639307 | 79639481 | 175 |
|
31.04196 | 5432.343 | 7320838 | 7321012 | 15 | 3968 | 3405.079 | 1.075021e+04 | 5.157143e+00 | 6.256294e+03 | 3.942857e+00 | 9.791429e+00 | -1.102551e+01 | -7.809844e-01 | -1.141284e+01 | -1.010056e+01 | 0.1348301 | FALSE | 0.5228326 | FALSE | LINC01094 | NR_038303 NR_038304 NR_038305 NR_038306 NR_038307 NR_038308 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.37 | FALSE |
| 410 | chr5 | 120037598 | 120037808 | 211 |
|
25.72427 | 5427.821 | 11492804 | 11493014 | 19 | 4521 | 1751.900 | 7.189431e+03 | 1.073460e+00 | 1.568777e+03 | 2.203791e-01 | 0.000000e+00 | -1.270939e+01 | -2.196237e+00 | -1.499360e+01 | -1.000000e+100 | 0.1349858 | FALSE | 0.5228326 | FALSE | PRR16 | NM_016644 NP_057728 XM_005272010 XM_005272011 XM_005272012 XP_005272067 XP_005272068 XP_005272069 | downstream | downstream | 237579 | NA | NA | NA | 3 | NA |
|
222945 | 205505 | 0.37 | FALSE |
| 411 | chr9 | 118603589 | 118603753 | 165 |
|
32.83987 | 5418.578 | 12091885 | 12092049 | 19 | 2207 | 3718.084 | 1.356126e+04 | 1.046061e+01 | 5.015252e+03 | 3.160606e+00 | 2.818182e-01 | -1.034031e+01 | -1.435098e+00 | -1.206700e+01 | -1.555437e+01 | 0.1352193 | FALSE | 0.5228326 | FALSE | LINC00474 | NM_021208 NR_024032 | NA | NA | 0 | NA | NA | NA | 3 | NA |
|
0 | 0 | 0.37 | FALSE |
| 412 | chr14 | 38664209 | 38664399 | 191 |
|
28.29785 | 5404.890 | 2171096 | 2171286 | 3 | 5592 | 2224.342 | 6.826751e+03 | 7.510471e+00 | 4.286919e+03 | 0.000000e+00 | 5.287958e-01 | -9.828080e+00 | -6.712581e-01 | -1.000000e+100 | -1.365620e+01 | 0.1354527 | FALSE | 0.5228326 | FALSE | SSTR1 | NM_001049 NP_001040 | upstream | upstream | 12805 | NA | NA | NA | 3 | NA |
|
5064 | 1175 | 0.37 | FALSE |
| 413 | chr3 | 191386785 | 191386962 | 178 |
|
30.32730 | 5398.260 | 19032872 | 19033049 | 42 | 5331 | 3133.029 | 1.049563e+04 | 1.490730e+01 | 5.146649e+03 | 1.665730e+00 | 6.289326e+00 | -9.459554e+00 | -1.028084e+00 | -1.262135e+01 | -1.070460e+01 | 0.1357640 | FALSE | 0.5228326 | FALSE | PYDC2 | NM_001083308 NP_001076777 | downstream | downstream | 207833 | NA | NA | NA | 1 | NA |
|
293 | 293 | 0.37 | FALSE |
| 414 | chr20 | 13338673 | 13338825 | 153 |
|
35.18905 | 5383.925 | 1482537 | 1482689 | 4 | 4259 | 4730.007 | 1.843032e+04 | 1.228758e+01 | 5.207425e+03 | 0.000000e+00 | 0.000000e+00 | -1.055066e+01 | -1.823439e+00 | -1.000000e+100 | -1.000000e+100 | 0.1362310 | FALSE | 0.5228326 | FALSE | TASP1 | NM_017714 NP_060184 XM_006723589 XM_006723590 XP_006723652 XP_006723653 XR_430268 | NA | NA | 0 | NA | NA | NA | 10 | NA |
|
0 | 0 | 0.37 | FALSE |
| 415 | chr9 | 85501595 | 85501730 | 136 |
|
39.57965 | 5382.832 | 7688572 | 7688707 | 9 | 2367 | 6370.220 | 1.771189e+04 | 1.577574e+01 | 1.412264e+04 | 0.000000e+00 | 7.977941e-01 | -1.013280e+01 | -3.267087e-01 | -1.000000e+100 | -1.443834e+01 | 0.1362310 | FALSE | 0.5228326 | FALSE | RASEF | NM_152573 NP_689786 XM_005251730 XM_005251731 XP_005251787 XP_005251788 | downstream | downstream | 176313 | NA | NA | NA | 17 | NA |
|
83543 | 80190 | 0.37 | FALSE |
| 416 | chr12 | 14863336 | 14863484 | 149 |
|
36.04179 | 5370.226 | 2906358 | 2906506 | 11 | 5086 | 4952.109 | 1.353235e+04 | 1.091275e+01 | 1.121514e+04 | 4.832215e-01 | 1.661074e+00 | -1.027618e+01 | -2.709642e-01 | -1.477337e+01 | -1.299201e+01 | 0.1365423 | FALSE | 0.5228326 | FALSE | GUCY2C | NM_004963 NP_004954 | upstream | upstream | 13817 | NA | NA | NA | 27 | NA |
|
83951 | 83331 | 0.37 | FALSE |
| 417 | chr7 | 120960479 | 120960635 | 157 |
|
34.16504 | 5363.911 | 13745339 | 13745495 | 19 | 3029 | 3941.086 | 1.360541e+04 | 4.369427e+00 | 6.094089e+03 | 6.433121e-01 | 9.171975e-01 | -1.160445e+01 | -1.158698e+00 | -1.436830e+01 | -1.385659e+01 | 0.1366979 | FALSE | 0.5228326 | FALSE | WNT16 | NM_016087 NM_057168 NP_057171 NP_476509 | upstream | upstream | 4786 | NA | NA | NA | 4 | NA |
|
15737 | 13929 | 0.37 | FALSE |
| 418 | chr1 | 213087313 | 213087470 | 158 |
|
33.90077 | 5356.322 | 27876520 | 27876677 | 34 | 4553 | 7092.387 | 2.058882e+04 | 6.226899e+01 | 1.476489e+04 | 1.646835e+01 | 2.949051e+01 | -8.369131e+00 | -4.796901e-01 | -1.028795e+01 | -9.447395e+00 | 0.1367758 | FALSE | 0.5228326 | FALSE | FLVCR1 | NM_014053 NP_054772 XR_247024 XR_426770 XR_426771 XR_426772 | downstream | downstream | 55716 | NA | NA | NA | 10 | NA |
|
41108 | 36837 | 0.37 | FALSE |
| 419 | chr2 | 64484276 | 64484432 | 157 |
|
34.07111 | 5349.165 | 6921525 | 6921681 | 15 | 2909 | 4800.822 | 1.166411e+04 | 3.662102e+01 | 1.229713e+04 | 3.369427e+00 | 2.882166e+00 | -8.315189e+00 | 7.624490e-02 | -1.175729e+01 | -1.198264e+01 | 0.1370870 | FALSE | 0.5228326 | FALSE | LINC00309 | NR_033837 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.37 | FALSE |
| 420 | chr7 | 9395038 | 9395184 | 147 |
|
36.38563 | 5348.688 | 1606106 | 1606252 | 2 | 2431 | 4877.780 | 1.749031e+04 | 1.726871e+01 | 6.881323e+03 | 0.000000e+00 | 0.000000e+00 | -9.984180e+00 | -1.345798e+00 | -1.000000e+100 | -1.000000e+100 | 0.1370870 | FALSE | 0.5228326 | FALSE | PER4 | NR_002790 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.37 | FALSE |
| 421 | chr1 | 183585580 | 183585741 | 162 |
|
32.98881 | 5344.187 | 24772407 | 24772568 | 31 | 3424 | 4162.499 | 1.010962e+04 | 6.862037e+01 | 1.063183e+04 | 5.524691e-01 | 1.870370e+00 | -7.202877e+00 | 7.266070e-02 | -1.415948e+01 | -1.240012e+01 | 0.1373205 | FALSE | 0.5228326 | FALSE | ARPC5 | NM_001270439 NM_005717 NP_001257368 NP_005708 | downstream | downstream | 19335 | NA | NA | NA | 4 | NA |
|
9748 | 8127 | 0.37 | FALSE |
| 422 | chr11 | 27655931 | 27656101 | 171 |
|
31.19998 | 5335.197 | 3887263 | 3887433 | 11 | 5437 | 3249.988 | 1.036731e+04 | 6.939181e+01 | 5.812947e+03 | 0.000000e+00 | 2.953216e-01 | -7.223060e+00 | -8.346994e-01 | -1.000000e+100 | -1.509939e+01 | 0.1373205 | FALSE | 0.5228326 | FALSE | BDNF-AS | NR_002832 NR_033312 NR_033313 NR_033314 NR_033315 | NA | NA | 0 | NA | NA | NA | 7 | NA |
|
0 | 0 | 0.37 | FALSE |
| 423 | chr15 | 35083315 | 35083496 | 182 |
|
29.30747 | 5333.959 | 1975470 | 1975651 | 1 | 5287 | 13179.582 | 2.995330e+02 | 6.103696e+04 | 4.157761e+03 | 4.821429e+00 | 3.988379e+02 | 7.670824e+00 | 3.795020e+00 | -5.957110e+00 | 4.130878e-01 | 0.1373205 | FALSE | 0.5228326 | FALSE | ACTC1 | NM_005159 NP_005150 | inside exon | inside | 4431 | inside exon | 0 | 6 | 7 | inside transcription region |
|
7630 | 4396 | 0.37 | FALSE |
| 424 | chr3 | 128683547 | 128683696 | 150 |
|
35.53268 | 5329.902 | 12919138 | 12919287 | 26 | 150 | 4736.724 | 1.299770e+04 | 2.784333e+01 | 1.065618e+04 | 3.366667e-01 | 1.563333e+00 | -8.866709e+00 | -2.865664e-01 | -1.523658e+01 | -1.302134e+01 | 0.1375540 | FALSE | 0.5228326 | FALSE | KIAA1257 | NM_020741 NP_065792 XM_005247667 XM_005247668 XM_005247669 XM_005247670 XP_005247724 XP_005247725 XP_005247726 XP_005247727 | inside intron | inside | 29223 | inside intron | -6434 | 7 | 8 | inside transcription region |
|
84210 | 83005 | 0.37 | FALSE |
| 425 | chr6 | 31133704 | 31133824 | 121 |
|
43.93091 | 5315.641 | 3901107 | 3901227 | 9 | 1641 | 9630.907 | 2.004107e+04 | 3.104132e+01 | 2.807744e+04 | 5.371901e-01 | 4.446281e+00 | -9.334554e+00 | 4.864517e-01 | -1.518717e+01 | -1.213807e+01 | 0.1380209 | FALSE | 0.5228326 | FALSE | POU5F1 | NM_001173531 NM_001285986 NM_001285987 NM_002701 NM_203289 NP_001167002 NP_001272915 NP_001272916 NP_002692 NP_976034 | inside exon | inside | 4627 | inside exon | 0 | 2 | 5 | inside transcription region |
|
6337 | 6019 | 0.37 | FALSE |
| 426 | chr11 | 27652288 | 27652427 | 140 |
|
37.95229 | 5313.321 | 3883620 | 3883759 | 11 | 5437 | 6053.728 | 1.218512e+04 | 4.917857e+01 | 1.803434e+04 | 0.000000e+00 | 0.000000e+00 | -7.952875e+00 | 5.656259e-01 | -1.000000e+100 | -1.000000e+100 | 0.1380988 | FALSE | 0.5228326 | FALSE | BDNF-AS | NR_002832 NR_033312 NR_033313 NR_033314 NR_033315 | NA | NA | 0 | NA | NA | NA | 7 | NA |
|
0 | 0 | 0.37 | FALSE |
| 427 | chr4 | 146757769 | 146757938 | 170 |
|
31.24698 | 5311.986 | 13415465 | 13415634 | 40 | 4092 | 3331.318 | 1.067485e+04 | 1.714412e+01 | 5.959659e+03 | 2.441177e+00 | 2.494118e+00 | -9.282286e+00 | -8.409142e-01 | -1.209435e+01 | -1.206340e+01 | 0.1380988 | FALSE | 0.5228326 | FALSE | ZNF827 | NM_178835 NP_849157 XM_006714094 XM_006714095 XM_006714096 XP_006714157 XP_006714158 XP_006714159 | inside intron | inside | 101669 | inside intron | -9170 | 6 | 14 | inside transcription region |
|
177719 | 175300 | 0.37 | FALSE |
| 428 | chr4 | 157526255 | 157526425 | 171 |
|
31.01195 | 5303.043 | 14347242 | 14347412 | 43 | 3624 | 3115.675 | 1.106697e+04 | 8.973684e+00 | 4.499842e+03 | 1.125731e+00 | 1.459064e+00 | -1.026827e+01 | -1.298315e+00 | -1.326311e+01 | -1.288893e+01 | 0.1387214 | FALSE | 0.5228326 | FALSE | PDGFC | NM_016205 NP_057289 NR_036641 XM_006714273 XP_006714336 | NA | NA | 0 | NA | NA | NA | 8 | NA |
|
0 | 0 | 0.37 | FALSE |
| 429 | chr12 | 48367052 | 48367269 | 218 |
|
24.32560 | 5302.981 | 5755782 | 5755999 | 14 | 2629 | 3884.031 | 2.712179e+02 | 2.291342e+03 | 9.342431e+01 | 1.743119e+00 | 1.676243e+04 | 3.078668e+00 | -1.537582e+00 | -7.281637e+00 | 5.949635e+00 | 0.1387214 | FALSE | 0.5228326 | FALSE | COL2A1 | NM_001844 NM_033150 NP_001835 NP_149162 XM_006719242 XP_006719305 | inside exon | inside | 31016 | inside exon | 0 | 53 | 53 | overlaps 3'UTR |
|
31537 | 30914 | 0.37 | FALSE |
| 430 | chr6 | 94543960 | 94544098 | 139 |
|
38.13810 | 5301.196 | 10563437 | 10563575 | 18 | 3908 | 5868.886 | 1.481051e+04 | 3.875540e+01 | 1.449481e+04 | 0.000000e+00 | 3.525180e-01 | -8.578008e+00 | -3.108430e-02 | -1.000000e+100 | -1.535856e+01 | 0.1387214 | FALSE | 0.5228326 | FALSE | TSG1 | NR_015362 | NA | NA | 0 | NA | NA | NA | 10 | NA |
|
0 | 0 | 0.37 | FALSE |
| 431 | chrX | 86939558 | 86939744 | 187 |
|
28.30863 | 5293.713 | 6793832 | 6794018 | 11 | 4336 | 2224.223 | 7.143976e+03 | 5.243315e+00 | 3.971110e+03 | 2.593583e-01 | 5.267380e-01 | -1.041203e+01 | -8.471850e-01 | -1.474949e+01 | -1.372735e+01 | 0.1390326 | FALSE | 0.5228326 | FALSE | KLHL4 | NM_019117 NM_057162 NP_061990 NP_476503 | downstream | downstream | 166843 | NA | NA | NA | 11 | NA |
|
152335 | 148637 | 0.37 | FALSE |
| 432 | chr9 | 88076183 | 88076351 | 169 |
|
31.29346 | 5288.596 | 7932126 | 7932294 | 10 | 779 | 3483.841 | 1.073650e+04 | 1.454142e+01 | 6.658219e+03 | 6.949704e+00 | 2.997041e+00 | -9.528139e+00 | -6.893152e-01 | -1.059328e+01 | -1.180670e+01 | 0.1394218 | FALSE | 0.5228326 | FALSE | AGTPBP1 | NM_001286715 NM_001286717 NM_015239 NP_001273644 NP_001273646 NP_056054 XM_005251847 XM_005251848 XM_005251849 XP_005251904 XP_005251905 XP_005251906 | downstream | downstream | 181907 | NA | NA | NA | 14 | NA |
|
96804 | 95897 | 0.37 | FALSE |
| 433 | chr7 | 51938982 | 51939157 | 176 |
|
29.96982 | 5274.689 | 5841080 | 5841255 | 12 | 476 | 3212.677 | 1.035197e+04 | 8.565341e+00 | 5.687438e+03 | 2.443182e-01 | 1.516761e+01 | -1.023911e+01 | -8.640545e-01 | -1.537078e+01 | -9.414695e+00 | 0.1401222 | FALSE | 0.5228326 | FALSE | COBL | NM_001287436 NM_001287438 NM_015198 NP_001274365 NP_001274367 NP_056013 XM_005271750 XM_005271751 XM_005271752 XM_005271753 XM_005271755 XM_005271756 XM_005271757 XM_006715675 XP_005271807 XP_005271808 XP_005271809 XP_005271810 XP_005271812 XP_005271813 XP_005271814 XP_006715738 | upstream | upstream | 554467 | NA | NA | NA | 13 | NA |
|
300606 | 299082 | 0.37 | FALSE |
| 434 | chr5 | 107890375 | 107890531 | 157 |
|
33.51798 | 5262.323 | 10352231 | 10352387 | 18 | 2567 | 4100.371 | 1.203206e+04 | 2.470701e+01 | 8.441869e+03 | 6.433121e-01 | 2.573248e+00 | -8.927748e+00 | -5.112493e-01 | -1.419101e+01 | -1.219101e+01 | 0.1411339 | FALSE | 0.5228326 | FALSE | FBXL17 | NM_001163315 NM_022824 NP_001156787 XM_005272048 XM_005272050 XP_005272105 XP_005272107 XR_427717 | upstream | upstream | 172576 | NA | NA | NA | 9 | NA |
|
523065 | 519971 | 0.37 | FALSE |
| 435 | chr8 | 42040237 | 42040408 | 172 |
|
30.46652 | 5240.241 | 4925179 | 4925350 | 7 | 17976 | 10322.842 | 1.234477e+02 | 5.840116e+01 | 6.428779e+01 | 5.127684e+04 | 9.123256e+01 | -1.079831e+00 | -9.412830e-01 | 8.698264e+00 | -4.362790e-01 | 0.1424569 | FALSE | 0.5228326 | FALSE | PLAT | NM_000930 NM_000931 NM_033011 NP_000921 NP_127509 | inside exon | inside | 24786 | inside exon | 0 | 5 | 11 | inside transcription region |
|
32958 | 17192 | 0.37 | FALSE |
| 436 | chr9 | 76702451 | 76702661 | 211 |
|
24.82263 | 5237.574 | 7023431 | 7023641 | 5 | 5530 | 1614.411 | 5.493436e+03 | 1.914692e+00 | 2.572040e+03 | 4.663507e+00 | 0.000000e+00 | -1.148638e+01 | -1.094796e+00 | -1.020208e+01 | -1.000000e+100 | 0.1426126 | FALSE | 0.5228326 | FALSE | RORB | NM_006914 NP_008845 | upstream | upstream | 409591 | NA | NA | NA | 10 | NA |
|
189865 | 187641 | 0.37 | FALSE |
| 437 | chr2 | 75441584 | 75441737 | 154 |
|
34.00836 | 5237.287 | 8786188 | 8786341 | 19 | 2416 | 3916.603 | 1.362453e+04 | 5.529221e+00 | 5.950789e+03 | 6.493506e-01 | 1.519481e+00 | -1.126684e+01 | -1.195053e+00 | -1.435685e+01 | -1.313034e+01 | 0.1426126 | FALSE | 0.5228326 | FALSE | TACR1 | NM_001058 NM_015727 NP_001049 NP_056542 | upstream | upstream | 14939 | NA | NA | NA | 5 | NA |
|
153055 | 149501 | 0.37 | FALSE |
| 438 | chr6 | 131828026 | 131828171 | 146 |
|
35.86403 | 5236.148 | 13904271 | 13904416 | 40 | 2468 | 5127.049 | 1.567762e+04 | 7.438356e+00 | 9.942072e+03 | 0.000000e+00 | 8.113014e+00 | -1.104144e+01 | -6.570881e-01 | -1.000000e+100 | -1.091618e+01 | 0.1426904 | FALSE | 0.5228326 | FALSE | ARG1 | NM_000045 NM_001244438 NP_000036 NP_001231367 | upstream | upstream | 66173 | NA | NA | NA | 7 | NA |
|
11121 | 10524 | 0.37 | FALSE |
| 439 | chr6 | 98232276 | 98232430 | 155 |
|
33.72918 | 5228.023 | 10817036 | 10817190 | 20 | 3504 | 3902.655 | 1.298763e+04 | 5.754839e+00 | 6.516932e+03 | 1.335484e+00 | 1.629032e+00 | -1.114007e+01 | -9.948728e-01 | -1.324749e+01 | -1.296083e+01 | 0.1430795 | FALSE | 0.5228326 | FALSE | MIR2113 | NR_031579 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.37 | FALSE |
| 440 | chr6 | 121942411 | 121942564 | 154 |
|
33.87079 | 5216.101 | 13047925 | 13048078 | 26 | 2940 | 3764.826 | 1.159419e+04 | 3.574675e+00 | 7.225705e+03 | 9.740260e-02 | 5.616883e-01 | -1.166330e+01 | -6.821921e-01 | -1.686101e+01 | -1.433327e+01 | 0.1437799 | FALSE | 0.5228326 | FALSE | GJA1 | NM_000165 NP_000156 | downstream | downstream | 185666 | NA | NA | NA | 2 | NA |
|
14128 | 1148 | 0.37 | FALSE |
| 441 | chr15 | 101615404 | 101615520 | 117 |
|
44.57300 | 5215.041 | 11600177 | 11600293 | 15 | 117 | 8255.841 | 2.418640e+04 | 4.700855e-01 | 1.709221e+04 | 1.282051e-01 | 0.000000e+00 | -1.565091e+01 | -5.008576e-01 | -1.752538e+01 | -1.000000e+100 | 0.1438577 | FALSE | 0.5228326 | FALSE | LRRK1 | NM_024652 NP_078928 XM_005254979 XP_005255036 | downstream | downstream | 155944 | NA | NA | NA | 34 | NA |
|
150857 | 144215 | 0.37 | FALSE |
| 442 | chr1 | 209626669 | 209626824 | 156 |
|
33.40084 | 5210.531 | 27369918 | 27370073 | 33 | 4569 | 7082.587 | 2.062527e+04 | 5.842308e+01 | 1.468115e+04 | 1.532372e+01 | 3.276923e+01 | -8.463659e+00 | -4.904477e-01 | -1.039443e+01 | -9.297855e+00 | 0.1442469 | FALSE | 0.5228326 | FALSE | MIR205HG | NM_001104548 NP_001098018 XM_006711486 XP_006711549 | downstream | downstream | 24501 | NA | NA | NA | 4 | NA |
|
3724 | 3051 | 0.37 | FALSE |
| 443 | chr2 | 64482675 | 64482833 | 159 |
|
32.65265 | 5191.771 | 6919924 | 6920082 | 15 | 2909 | 4298.613 | 1.158726e+04 | 5.078302e+01 | 9.847346e+03 | 3.176101e-01 | 7.355346e+00 | -7.833978e+00 | -2.347327e-01 | -1.515492e+01 | -1.062146e+01 | 0.1452586 | FALSE | 0.5228326 | FALSE | LINC00309 | NR_033837 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.37 | FALSE |
| 444 | chr4 | 157523994 | 157524128 | 135 |
|
38.43270 | 5188.414 | 14345267 | 14345401 | 43 | 3624 | 7741.548 | 1.476104e+04 | 8.705185e+01 | 2.385863e+04 | 0.000000e+00 | 1.014815e+00 | -7.405704e+00 | 6.927170e-01 | -1.000000e+100 | -1.382829e+01 | 0.1454142 | FALSE | 0.5228326 | FALSE | PDGFC | NM_016205 NP_057289 NR_036641 XM_006714273 XP_006714336 | NA | NA | 0 | NA | NA | NA | 8 | NA |
|
0 | 0 | 0.37 | FALSE |
| 445 | chr14 | 47576043 | 47576205 | 163 |
|
31.82270 | 5187.101 | 2716423 | 2716585 | 7 | 4412 | 3427.111 | 9.737353e+03 | 1.648466e+01 | 7.378003e+03 | 1.546012e+00 | 2.168712e+00 | -9.206261e+00 | -4.002992e-01 | -1.262076e+01 | -1.213248e+01 | 0.1454142 | FALSE | 0.5228326 | FALSE | MDGA2 | NM_001113498 NM_182830 NP_001106970 NP_878250 NR_103766 XM_006720068 XP_006720131 | inside intron | inside | 519523 | inside intron | 9717 | 6 | 15 | 5' UTR |
|
755585 | 189427 | 0.37 | FALSE |
| 446 | chrX | 124527068 | 124527218 | 151 |
|
34.33246 | 5184.202 | 10075219 | 10075369 | 30 | 5372 | 3859.974 | 1.203386e+04 | 1.996689e+00 | 7.262672e+03 | 0.000000e+00 | 1.337748e+00 | -1.255720e+01 | -7.285272e-01 | -1.000000e+100 | -1.313501e+01 | 0.1455699 | FALSE | 0.5228326 | FALSE | LOC100129520 | NM_001195272 NP_001182201 XM_005262352 XP_005262409 | downstream | downstream | 73099 | NA | NA | NA | 1 | NA |
|
2981 | 2981 | 0.37 | FALSE |
| 447 | chr10 | 55928206 | 55928397 | 192 |
|
26.98071 | 5180.295 | 5619804 | 5619995 | 11 | 4015 | 2083.796 | 6.199388e+03 | 9.346354e+00 | 4.205115e+03 | 0.000000e+00 | 5.130208e+00 | -9.373506e+00 | -5.599807e-01 | -1.000000e+100 | -1.023889e+01 | 0.1457255 | FALSE | 0.5228326 | FALSE | PCDH15 | NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056 NP_001136235 NP_001136236 NP_001136237 NP_001136238 NP_001136239 NP_001136240 NP_001136241 NP_001136242 NP_001136243 NP_001136244 NP_001136245 NP_149045 XM_006717950 XP_006718013 | inside intron | inside | 632654 | inside intron | -14807 | 13 | 21 | inside transcription region |
|
806711 | 668631 | 0.37 | FALSE |
| 448 | chr4 | 146759030 | 146759211 | 182 |
|
28.42292 | 5172.972 | 13416679 | 13416860 | 40 | 4092 | 3089.326 | 1.006311e+04 | 2.363187e+01 | 5.345555e+03 | 6.087912e+00 | 8.244506e+00 | -8.734127e+00 | -9.126650e-01 | -1.069084e+01 | -1.025336e+01 | 0.1461925 | FALSE | 0.5228326 | FALSE | ZNF827 | NM_178835 NP_849157 XM_006714094 XM_006714095 XM_006714096 XP_006714157 XP_006714158 XP_006714159 | inside intron | inside | 100396 | inside intron | -7897 | 6 | 14 | inside transcription region |
|
177719 | 175300 | 0.37 | FALSE |
| 449 | chr1 | 99979577 | 99979761 | 185 |
|
27.93636 | 5168.226 | 14810087 | 14810271 | 24 | 3707 | 2300.211 | 8.207873e+03 | 8.208108e+00 | 3.282068e+03 | 1.332432e+00 | 1.575676e+00 | -9.965743e+00 | -1.322404e+00 | -1.258873e+01 | -1.234682e+01 | 0.1463481 | FALSE | 0.5228326 | FALSE | PALMD | NM_017734 NP_060204 | upstream | upstream | 131670 | NA | NA | NA | 8 | NA |
|
48666 | 47744 | 0.37 | FALSE |
| 450 | chr3 | 46620722 | 46620856 | 135 |
|
38.13678 | 5148.465 | 5031726 | 5031860 | 11 | 4701 | 5325.888 | 1.489700e+04 | 8.962963e-01 | 1.173155e+04 | 0.000000e+00 | 0.000000e+00 | -1.402069e+01 | -3.446281e-01 | -1.000000e+100 | -1.000000e+100 | 0.1473598 | FALSE | 0.5228326 | FALSE | LRRC2 | NM_024512 NM_024750 NP_078788 XM_006713332 XP_006713395 | inside intron | inside | 716 | inside intron | -571 | 1 | 9 | 5' UTR |
|
64694 | 32577 | 0.37 | FALSE |
| 451 | chr3 | 46621441 | 46621550 | 110 |
|
46.76143 | 5143.758 | 5032445 | 5032554 | 11 | 4701 | 10162.689 | 2.846715e+04 | 1.868182e+00 | 2.234443e+04 | 0.000000e+00 | 0.000000e+00 | -1.389538e+01 | -3.493825e-01 | -1.000000e+100 | -1.000000e+100 | 0.1475933 | FALSE | 0.5228326 | FALSE | LRRC2 | NM_024512 NM_024750 NP_078788 XM_006713332 XP_006713395 | inside exon | inside | 22 | inside exon | 0 | 1 | 9 | 5' UTR |
|
64694 | 32577 | 0.37 | FALSE |
| 452 | chr13 | 89165806 | 89165957 | 152 |
|
33.82351 | 5141.173 | 5638792 | 5638943 | 25 | 4104 | 3963.697 | 1.359509e+04 | 7.720395e+00 | 6.212500e+03 | 1.615132e+00 | 1.559211e+00 | -1.078212e+01 | -1.129840e+00 | -1.303915e+01 | -1.308998e+01 | 0.1477489 | FALSE | 0.5228326 | FALSE | LINC00433 | NR_047021 | NA | NA | 0 | NA | NA | NA | 3 | NA |
|
0 | 0 | 0.37 | FALSE |
| 453 | chr8 | 115256752 | 115256897 | 146 |
|
35.19368 | 5138.278 | 10959032 | 10959177 | 25 | 3330 | 4514.747 | 1.326747e+04 | 2.756849e+00 | 9.298685e+03 | 0.000000e+00 | 4.821918e+00 | -1.223259e+01 | -5.127950e-01 | -1.000000e+100 | -1.142600e+01 | 0.1479824 | FALSE | 0.5228326 | FALSE | CSMD3 | NM_052900 NM_198123 NM_198124 NP_443132 NP_937756 NP_937757 | upstream | upstream | 807510 | NA | NA | NA | 71 | NA |
|
1214083 | 1212083 | 0.37 | FALSE |
| 454 | chr19 | 54335701 | 54335895 | 195 |
|
26.31560 | 5131.542 | 14736927 | 14737121 | 10 | 5816 | 2039.200 | 8.250872e+03 | 1.090769e+01 | 1.929659e+03 | 0.000000e+00 | 4.561539e+00 | -9.563057e+00 | -2.096201e+00 | -1.000000e+100 | -1.082081e+01 | 0.1482937 | FALSE | 0.5228326 | FALSE | NLRP12 | NM_001277126 NM_001277129 NM_033297 NM_144687 NP_001264055 NP_001264058 NP_653288 | upstream | upstream | 8044 | NA | NA | NA | 10 | NA |
|
30802 | 30125 | 0.37 | FALSE |
| 455 | chr9 | 88076816 | 88076961 | 146 |
|
35.13702 | 5130.005 | 7932759 | 7932904 | 10 | 779 | 4688.518 | 1.743442e+04 | 7.787671e+00 | 5.995267e+03 | 3.698630e-01 | 4.743151e+00 | -1.112846e+01 | -1.540042e+00 | -1.552459e+01 | -1.184381e+01 | 0.1482937 | FALSE | 0.5228326 | FALSE | AGTPBP1 | NM_001286715 NM_001286717 NM_015239 NP_001273644 NP_001273646 NP_056054 XM_005251847 XM_005251848 XM_005251849 XP_005251904 XP_005251905 XP_005251906 | downstream | downstream | 181297 | NA | NA | NA | 14 | NA |
|
96804 | 95897 | 0.37 | FALSE |
| 456 | chr1 | 215588727 | 215588866 | 140 |
|
36.63368 | 5128.716 | 28108538 | 28108677 | 35 | 4889 | 5159.356 | 1.353791e+04 | 4.019286e+01 | 1.221867e+04 | 0.000000e+00 | 0.000000e+00 | -8.395850e+00 | -1.479173e-01 | -1.000000e+100 | -1.000000e+100 | 0.1482937 | FALSE | 0.5228326 | FALSE | KCTD3 | NM_016121 NP_057205 XM_005273156 XM_005273157 XM_005273158 XP_005273213 XP_005273214 XP_005273215 | upstream | upstream | 151869 | NA | NA | NA | 18 | NA |
|
54414 | 52931 | 0.37 | FALSE |
| 457 | chr1 | 230744198 | 230744331 | 134 |
|
38.27205 | 5128.455 | 30168058 | 30168191 | 46 | 134 | 5322.431 | 1.636809e+04 | 1.503731e+00 | 1.024256e+04 | 0.000000e+00 | 0.000000e+00 | -1.341005e+01 | -6.763100e-01 | -1.000000e+100 | -1.000000e+100 | 0.1482937 | FALSE | 0.5228326 | FALSE | COG2 | NM_001145036 NM_007357 NP_001138508 NP_031383 | upstream | upstream | 33871 | NA | NA | NA | 18 | NA |
|
51529 | 50786 | 0.37 | FALSE |
| 458 | chr3 | 125584389 | 125584536 | 148 |
|
34.54577 | 5112.774 | 12431883 | 12432030 | 25 | 926 | 4187.158 | 1.672652e+04 | 6.317568e-01 | 4.206253e+03 | 6.959459e-01 | 1.692568e+00 | -1.469241e+01 | -1.991529e+00 | -1.455280e+01 | -1.327064e+01 | 0.1489941 | FALSE | 0.5228326 | FALSE | FAM86JP | NR_024250 NR_024251 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.37 | FALSE |
| 459 | chr16 | 9767312 | 9767479 | 168 |
|
30.42574 | 5111.525 | 2220779 | 2220946 | 4 | 8636 | 3097.167 | 1.325230e+04 | 6.011905e-01 | 2.232935e+03 | 0.000000e+00 | 0.000000e+00 | -1.442806e+01 | -2.569230e+00 | -1.000000e+100 | -1.000000e+100 | 0.1489941 | FALSE | 0.5228326 | FALSE | GRIN2A | NM_000833 NM_001134407 NM_001134408 NP_000824 NP_001127879 NP_001127880 XM_005255267 XM_005255268 XP_005255324 XP_005255325 | downstream | downstream | 508784 | NA | NA | NA | 13 | NA |
|
428998 | 417262 | 0.37 | FALSE |
| 460 | chrX | 4811221 | 4811376 | 156 |
|
32.74111 | 5107.613 | 716998 | 717153 | 3 | 5024 | 3687.783 | 1.339104e+04 | 4.711538e+00 | 5.038455e+03 | 0.000000e+00 | 4.705128e+00 | -1.147278e+01 | -1.410215e+00 | -1.000000e+100 | -1.147475e+01 | 0.1490719 | FALSE | 0.5228326 | FALSE | NLGN4X | NM_001282145 NM_001282146 NM_020742 NM_181332 NP_001269074 NP_001269075 NP_065793 NP_851849 XM_005274564 XM_005274565 XM_005274566 XM_005274568 XM_006724504 XP_005274621 XP_005274622 XP_005274623 XP_005274625 XP_006724567 | downstream | downstream | 1258436 | NA | NA | NA | 6 | NA |
|
261729 | 258649 | 0.37 | FALSE |
| 461 | chr9 | 118601996 | 118602155 | 160 |
|
31.91279 | 5106.046 | 12090292 | 12090451 | 19 | 2207 | 5197.528 | 1.564444e+04 | 3.037187e+01 | 1.027892e+04 | 1.400000e+01 | 1.990312e+01 | -9.008698e+00 | -6.059604e-01 | -1.012601e+01 | -9.618439e+00 | 0.1491498 | FALSE | 0.5228326 | FALSE | LINC00474 | NM_021208 NR_024032 | NA | NA | 0 | NA | NA | NA | 3 | NA |
|
0 | 0 | 0.37 | FALSE |
| 462 | chr9 | 90027563 | 90027737 | 175 |
|
29.15573 | 5102.254 | 8213280 | 8213454 | 12 | 5446 | 2329.389 | 6.957891e+03 | 2.228571e+00 | 4.686823e+03 | 0.000000e+00 | 0.000000e+00 | -1.160832e+01 | -5.700399e-01 | -1.000000e+100 | -1.000000e+100 | 0.1495389 | FALSE | 0.5228326 | FALSE | DAPK1 | NM_001288729 NM_001288730 NM_001288731 NM_004938 NP_001275658 NP_001275659 NP_001275660 NP_004929 XM_005251757 XM_006716988 XP_005251814 XP_006717051 | upstream | upstream | 84921 | NA | NA | NA | 26 | NA |
|
210891 | 208286 | 0.37 | FALSE |
| 463 | chr9 | 85503692 | 85503849 | 158 |
|
32.25328 | 5096.019 | 7690669 | 7690826 | 9 | 2367 | 3788.093 | 1.194089e+04 | 1.691139e+01 | 6.976766e+03 | 1.829114e+00 | 4.072785e+00 | -9.463699e+00 | -7.752796e-01 | -1.267248e+01 | -1.151761e+01 | 0.1498502 | FALSE | 0.5228326 | FALSE | RASEF | NM_152573 NP_689786 XM_005251730 XM_005251731 XP_005251787 XP_005251788 | downstream | downstream | 174194 | NA | NA | NA | 17 | NA |
|
83543 | 80190 | 0.37 | FALSE |
| 464 | chr1 | 232365873 | 232366026 | 154 |
|
33.08968 | 5095.810 | 30485312 | 30485465 | 49 | 2182 | 7141.016 | 2.011139e+04 | 6.522078e+01 | 1.548103e+04 | 1.901623e+01 | 2.842532e+01 | -8.268465e+00 | -3.775114e-01 | -1.004657e+01 | -9.466620e+00 | 0.1499280 | FALSE | 0.5228326 | FALSE | SIPA1L2 | NM_020808 NP_065859 XM_005273209 XM_005273211 XM_005273212 XM_005273213 XM_005273214 XM_006711798 XM_006711799 XP_005273266 XP_005273268 XP_005273269 XP_005273270 XP_005273271 XP_006711861 XP_006711862 | downstream | downstream | 232137 | NA | NA | NA | 14 | NA |
|
64451 | 63107 | 0.37 | FALSE |
| 465 | chrX | 113838518 | 113838680 | 163 |
|
31.23774 | 5091.751 | 9205616 | 9205778 | 25 | 4367 | 3102.779 | 9.577672e+03 | 7.266871e+00 | 5.926730e+03 | 3.098160e-01 | 1.917178e+00 | -1.036412e+01 | -6.924386e-01 | -1.491598e+01 | -1.228648e+01 | 0.1504728 | FALSE | 0.5228326 | FALSE | HTR2C | NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690 | inside intron | inside | 19967 | inside intron | 9593 | 2 | 7 | 5' UTR |
|
326073 | 180632 | 0.37 | FALSE |
| 466 | chr4 | 80475635 | 80475785 | 151 |
|
33.66067 | 5082.762 | 7389638 | 7389788 | 16 | 2580 | 7254.020 | 2.082752e+04 | 6.385762e+01 | 1.533016e+04 | 2.239404e+01 | 2.617219e+01 | -8.349416e+00 | -4.421182e-01 | -9.861160e+00 | -9.636241e+00 | 0.1513288 | FALSE | 0.5228326 | FALSE | LINC00989 | NR_038826 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.37 | FALSE |
| 467 | chr5 | 121812906 | 121813078 | 173 |
|
29.34795 | 5077.195 | 11609158 | 11609330 | 21 | 3455 | 2770.842 | 8.652702e+03 | 7.708093e+00 | 5.187974e+03 | 5.838150e-01 | 5.242775e+00 | -1.013256e+01 | -7.379795e-01 | -1.385535e+01 | -1.068860e+01 | 0.1514845 | FALSE | 0.5228326 | FALSE | MGC32805 | NR_051996 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.37 | FALSE |
| 468 | chr16 | 13447965 | 13448113 | 149 |
|
34.07504 | 5077.180 | 2742289 | 2742437 | 5 | 5109 | 4107.481 | 1.525142e+04 | 4.496644e+00 | 5.279238e+03 | 1.570470e+00 | 6.778523e-01 | -1.172781e+01 | -1.530542e+00 | -1.324546e+01 | -1.445761e+01 | 0.1514845 | FALSE | 0.5228326 | FALSE | SHISA9 | NM_001145204 NM_001145205 NP_001138676 NP_001138677 XM_005255539 XP_005255596 | downstream | downstream | 452488 | NA | NA | NA | 5 | NA |
|
338796 | 333344 | 0.37 | FALSE |
| 469 | chr8 | 72590857 | 72591003 | 147 |
|
34.40251 | 5057.170 | 7346903 | 7347049 | 11 | 5162 | 3902.184 | 1.480539e+04 | 2.574830e+00 | 4.702956e+03 | 0.000000e+00 | 0.000000e+00 | -1.248936e+01 | -1.654483e+00 | -1.000000e+100 | -1.000000e+100 | 0.1525740 | FALSE | 0.5228326 | FALSE | MSC | NM_005098 NP_005089 | downstream | downstream | 165728 | NA | NA | NA | 2 | NA |
|
2954 | 1517 | 0.37 | FALSE |
| 470 | chr6 | 120783847 | 120783983 | 137 |
|
36.87818 | 5052.311 | 12972672 | 12972808 | 25 | 2194 | 5452.920 | 2.083030e+04 | 8.127737e+00 | 6.419015e+03 | 4.167883e+00 | 2.992701e+00 | -1.132354e+01 | -1.698260e+00 | -1.228708e+01 | -1.276495e+01 | 0.1528075 | FALSE | 0.5228326 | FALSE | TBC1D32 | NM_152730 NP_689943 NR_104452 XM_005266861 XP_005266918 | downstream | downstream | 871661 | NA | NA | NA | 32 | NA |
|
255017 | 253659 | 0.37 | FALSE |
| 471 | chr1 | 213083415 | 213083556 | 142 |
|
35.56100 | 5049.663 | 27873112 | 27873253 | 34 | 4553 | 4602.649 | 1.226246e+04 | 4.862676e+00 | 1.074289e+04 | 7.640845e-01 | 2.267606e+00 | -1.130021e+01 | -1.908668e-01 | -1.397016e+01 | -1.240079e+01 | 0.1529632 | FALSE | 0.5228326 | FALSE | FLVCR1 | NM_014053 NP_054772 XR_247024 XR_426770 XR_426771 XR_426772 | downstream | downstream | 51818 | NA | NA | NA | 10 | NA |
|
41108 | 36837 | 0.37 | FALSE |
| 472 | chr3 | 186894026 | 186894178 | 153 |
|
32.97949 | 5045.861 | 18778385 | 18778537 | 40 | 5076 | 3667.052 | 1.271700e+04 | 5.532680e+00 | 5.609794e+03 | 1.303922e+00 | 1.630719e+00 | -1.116649e+01 | -1.180738e+00 | -1.325161e+01 | -1.292896e+01 | 0.1535079 | FALSE | 0.5228326 | FALSE | RTP1 | NM_153708 NP_714919 | upstream | upstream | 21096 | NA | NA | NA | 2 | NA |
|
3979 | 2554 | 0.37 | FALSE |
| 473 | chr5 | 5520703 | 5520838 | 136 |
|
37.08730 | 5043.873 | 713580 | 713715 | 3 | 136 | 5300.716 | 2.031335e+04 | 6.286765e+00 | 6.178449e+03 | 4.775735e+00 | 7.242647e-01 | -1.165782e+01 | -1.717111e+00 | -1.205442e+01 | -1.477555e+01 | 0.1535857 | FALSE | 0.5228326 | FALSE | KIAA0947 | NM_015325 NP_056140 | downstream | downstream | 97917 | NA | NA | NA | 19 | NA |
|
67561 | 66414 | 0.37 | FALSE |
| 474 | chr9 | 12949586 | 12949757 | 172 |
|
29.29830 | 5039.307 | 1178036 | 1178207 | 1 | 5083 | 2970.685 | 9.840890e+03 | 3.825581e+00 | 4.993006e+03 | 1.267442e+00 | 1.443895e+01 | -1.132889e+01 | -9.788801e-01 | -1.292265e+01 | -9.412679e+00 | 0.1541305 | FALSE | 0.5228326 | FALSE | LURAP1L | NM_203403 NP_981948 XM_005251443 XP_005251500 | downstream | downstream | 174574 | NA | NA | NA | 2 | NA |
|
48047 | 46044 | 0.37 | FALSE |
| 475 | chr22 | 32901358 | 32901520 | 163 |
|
30.88618 | 5034.448 | 3353975 | 3354137 | 2 | 163 | 4074.898 | 1.257800e+04 | 2.004908e+01 | 7.751163e+03 | 1.108896e+01 | 1.419018e+01 | -9.293151e+00 | -6.984179e-01 | -1.014756e+01 | -9.791794e+00 | 0.1543640 | FALSE | 0.5228326 | FALSE | FBXO7 | NM_001033024 NM_001257990 NM_012179 NP_001028196 NP_001244919 NP_036311 | downstream | downstream | 30651 | NA | NA | NA | 9 | NA |
|
24111 | 23527 | 0.37 | FALSE |
| 476 | chr4 | 95008729 | 95008889 | 161 |
|
31.24308 | 5030.136 | 8965092 | 8965252 | 27 | 2519 | 3462.618 | 1.063182e+04 | 1.170807e+01 | 6.657851e+03 | 6.295031e+00 | 5.419255e+00 | -9.826669e+00 | -6.752597e-01 | -1.072189e+01 | -1.093801e+01 | 0.1546753 | FALSE | 0.5228326 | FALSE | SMARCAD1 | NM_001128429 NM_001128430 NM_001254949 NM_020159 NP_001121901 NP_001121902 NP_001241878 NP_064544 NR_045644 XM_006714275 XM_006714276 XM_006714277 XP_006714338 XP_006714339 XP_006714340 | upstream | upstream | 119870 | NA | NA | NA | 24 | NA |
|
83684 | 81139 | 0.37 | FALSE |
| 477 | chr12 | 11617992 | 11618135 | 144 |
|
34.86781 | 5020.965 | 2389631 | 2389774 | 8 | 2899 | 4829.208 | 1.004690e+04 | 6.287500e+01 | 1.403558e+04 | 3.090278e-01 | 3.715278e-01 | -7.320048e+00 | 4.823387e-01 | -1.498865e+01 | -1.472292e+01 | 0.1552200 | FALSE | 0.5228326 | FALSE | PRB2 | NM_006248 NP_006239 | upstream | upstream | 69494 | NA | NA | NA | 4 | NA |
|
4024 | 2702 | 0.37 | FALSE |
| 478 | chr21 | 42330522 | 42330680 | 159 |
|
31.57230 | 5019.996 | 2187821 | 2187979 | 1 | 2438 | 3167.812 | 1.175639e+04 | 6.669811e+00 | 4.075094e+03 | 0.000000e+00 | 9.088050e-01 | -1.078351e+01 | -1.528539e+00 | -1.000000e+100 | -1.365911e+01 | 0.1552979 | FALSE | 0.5228326 | FALSE | DSCAM | NM_001271534 NM_001389 NP_001258463 NP_001380 NR_073202 XM_006723975 XP_006724038 | upstream | upstream | 111483 | NA | NA | NA | 33 | NA |
|
834696 | 833626 | 0.37 | FALSE |
| 479 | chr8 | 42044916 | 42045090 | 175 |
|
28.66386 | 5016.176 | 4929858 | 4930032 | 7 | 17976 | 5430.797 | 6.945143e+01 | 3.235143e+01 | 3.155429e+01 | 2.698386e+04 | 3.676857e+01 | -1.102175e+00 | -1.138168e+00 | 8.601876e+00 | -9.175312e-01 | 0.1556092 | FALSE | 0.5228326 | FALSE | PLAT | NM_000930 NM_000931 NM_033011 NP_000921 NP_127509 | inside intron | inside | 20104 | inside intron | -1362 | 4 | 11 | inside transcription region |
|
32958 | 17192 | 0.37 | FALSE |
| 480 | chr4 | 57897327 | 57897502 | 176 |
|
28.43535 | 5004.621 | 5695296 | 5695471 | 10 | 2151 | 31497.159 | 1.627642e+02 | 3.169069e+04 | 1.530682e+02 | 1.252948e+05 | 1.845000e+02 | 7.605132e+00 | -8.860900e-02 | 9.588327e+00 | 1.808374e-01 | 0.1561539 | FALSE | 0.5228326 | FALSE | POLR2B | NM_000938 NP_000929 | overlaps 3' | overlaps 3' | 21602 | inside exon | 0 | 15 | 15 | 3'UTR |
|
21609 | 20510 | 0.37 | FALSE |
| 481 | chr4 | 104477840 | 104478004 | 165 |
|
30.27312 | 4995.064 | 9868121 | 9868285 | 29 | 1268 | 2964.185 | 9.357442e+03 | 9.715151e+00 | 5.448500e+03 | 2.381818e+00 | 2.884848e+00 | -9.911662e+00 | -7.802552e-01 | -1.193984e+01 | -1.166340e+01 | 0.1565431 | FALSE | 0.5228326 | FALSE | TACR3 | NM_001059 NP_001050 | downstream | downstream | 162969 | NA | NA | NA | 5 | NA |
|
130348 | 129993 | 0.37 | FALSE |
| 482 | chr20 | 36756871 | 36757069 | 199 |
|
25.09139 | 4993.186 | 4127588 | 4127786 | 5 | 1818 | 5495.297 | 1.388693e+01 | 8.946515e+03 | 1.682663e+01 | 1.848050e+04 | 1.875628e+01 | 9.331454e+00 | 2.770184e-01 | 1.037806e+01 | 4.336456e-01 | 0.1566209 | FALSE | 0.5228326 | FALSE | TGM2 | NM_004613 NM_198951 NP_004604 NP_945189 | inside exon | inside | 36631 | inside exon | 0 | 12 | 12 | 3'UTR |
|
36836 | 34979 | 0.37 | FALSE |
| 483 | chr2 | 77319554 | 77319733 | 180 |
|
27.72747 | 4990.945 | 8907107 | 8907286 | 21 | 5816 | 2225.101 | 9.145433e+03 | 6.666667e+00 | 1.973406e+03 | 0.000000e+00 | 0.000000e+00 | -1.042187e+01 | -2.212364e+00 | -1.000000e+100 | -1.000000e+100 | 0.1570100 | FALSE | 0.5228326 | FALSE | LRRTM4 | NM_001134745 NM_001282924 NM_001282928 NM_024993 NP_001128217 NP_001269853 NP_001269857 NP_079269 | inside intron | inside | 429769 | inside intron | 343512 | 4 | 4 | inside transcription region |
|
774652 | 772976 | 0.37 | FALSE |
| 484 | chr3 | 186895687 | 186895843 | 157 |
|
31.76940 | 4987.795 | 18780046 | 18780202 | 40 | 5076 | 3217.250 | 1.231121e+04 | 8.273885e+00 | 3.766446e+03 | 0.000000e+00 | 3.216561e-01 | -1.053912e+01 | -1.708697e+00 | -1.000000e+100 | -1.522409e+01 | 0.1573213 | FALSE | 0.5228326 | FALSE | RTP1 | NM_153708 NP_714919 | upstream | upstream | 19431 | NA | NA | NA | 2 | NA |
|
3979 | 2554 | 0.37 | FALSE |
| 485 | chr22 | 38075610 | 38075804 | 195 |
|
25.53773 | 4979.857 | 4027255 | 4027449 | 3 | 2798 | 16911.703 | 5.408564e+02 | 1.024385e+02 | 3.339000e+02 | 8.287124e+04 | 7.100821e+02 | -2.400488e+00 | -6.958295e-01 | 7.259482e+00 | 3.927401e-01 | 0.1576326 | FALSE | 0.5228326 | FALSE | LGALS1 | NM_002305 NP_002296 | inside exon | inside | 3997 | inside exon | 0 | 4 | 4 | overlaps 3'UTR |
|
4196 | 4046 | 0.37 | FALSE |
| 486 | chr15 | 37531346 | 37531501 | 156 |
|
31.90747 | 4977.566 | 2157678 | 2157833 | 4 | 156 | 3466.253 | 9.436237e+03 | 1.887179e+01 | 7.871439e+03 | 3.782051e+00 | 9.326923e-01 | -8.965836e+00 | -2.615843e-01 | -1.128483e+01 | -1.330452e+01 | 0.1578661 | FALSE | 0.5228326 | FALSE | MEIS2 | NM_001220482 NM_002399 NM_020149 NM_170674 NM_170675 NM_170676 NM_170677 NM_172315 NM_172316 NP_001207411 NP_002390 NP_733774 NP_733775 NP_733776 NP_733777 NP_758526 NP_758527 NR_051953 XM_006720522 XM_006720523 XM_006720524 XM_006720525 XM_006720526 XM_006720527 XM_006720528 XM_006720529 XP_006720585 XP_006720586 XP_006720587 XP_006720588 XP_006720589 XP_006720590 XP_006720591 XP_006720592 | upstream | upstream | 137846 | NA | NA | NA | 13 | NA |
|
210278 | 207293 | 0.37 | FALSE |
| 487 | chr11 | 27638254 | 27638432 | 179 |
|
27.80569 | 4977.219 | 3869586 | 3869764 | 9 | 3784 | 2362.928 | 7.283282e+03 | 2.571788e+01 | 4.501972e+03 | 3.206704e+00 | 4.608939e-01 | -8.145673e+00 | -6.940316e-01 | -1.114928e+01 | -1.394787e+01 | 0.1579439 | FALSE | 0.5228326 | FALSE | BDNF-AS | NR_002832 NR_033312 NR_033313 NR_033314 NR_033315 | NA | NA | 0 | NA | NA | NA | 7 | NA |
|
0 | 0 | 0.37 | FALSE |
| 488 | chr7 | 24331282 | 24331475 | 194 |
|
25.63238 | 4972.681 | 2945292 | 2945485 | 5 | 2336 | 3434.131 | 4.728351e+01 | 2.515206e+01 | 2.695644e+02 | 1.682639e+04 | 2.262887e+00 | -9.106603e-01 | 2.511221e+00 | 8.475173e+00 | -4.385101e+00 | 0.1580995 | FALSE | 0.5228326 | FALSE | NPY | NM_000905 NP_000896 | inside exon | inside | 7475 | inside exon | 0 | 4 | 4 | overlaps 3'UTR |
|
7677 | 6446 | 0.37 | FALSE |
| 489 | chr2 | 8015757 | 8015920 | 164 |
|
30.23654 | 4958.792 | 589502 | 589665 | 2 | 5921 | 3380.902 | 1.033791e+04 | 1.622256e+01 | 6.533223e+03 | 7.564024e+00 | 9.591463e+00 | -9.315727e+00 | -6.620777e-01 | -1.041650e+01 | -1.007391e+01 | 0.1592669 | FALSE | 0.5228326 | FALSE | LINC00298 | NR_015405 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.37 | FALSE |
| 490 | chr4 | 79635514 | 79635661 | 148 |
|
33.41849 | 4945.936 | 7317434 | 7317581 | 15 | 3968 | 6942.799 | 2.001605e+04 | 6.030743e+01 | 1.459057e+04 | 2.010135e+01 | 2.696959e+01 | -8.374606e+00 | -4.561208e-01 | -9.959649e+00 | -9.535608e+00 | 0.1601230 | FALSE | 0.5228326 | FALSE | LINC01094 | NR_038303 NR_038304 NR_038305 NR_038306 NR_038307 NR_038308 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.37 | FALSE |
| 491 | chr22 | 28139251 | 28139420 | 170 |
|
29.07408 | 4942.593 | 2303165 | 2303334 | 1 | 1668 | 3166.511 | 1.024273e+04 | 6.658823e+00 | 5.560485e+03 | 7.397059e+00 | 1.528529e+01 | -1.058704e+01 | -8.813171e-01 | -1.043536e+01 | -9.388240e+00 | 0.1602786 | FALSE | 0.5228326 | FALSE | MN1 | NM_002430 NP_002421 | downstream | downstream | 48451 | NA | NA | NA | 2 | NA |
|
43606 | 40907 | 0.37 | FALSE |
| 492 | chr19 | 5552540 | 5552676 | 137 |
|
36.02013 | 4934.757 | 1919902 | 1920038 | 1 | 1816 | 4925.164 | 1.508032e+04 | 2.333212e+01 | 9.520631e+03 | 3.686131e-01 | 1.167883e+00 | -9.336134e+00 | -6.635380e-01 | -1.532020e+01 | -1.365648e+01 | 0.1605121 | FALSE | 0.5228326 | FALSE | TINCR | NM_153375 NR_027064 | downstream | downstream | 15329 | NA | NA | NA | 3 | NA |
|
9827 | 455 | 0.37 | FALSE |
| 493 | chr4 | 146623983 | 146624130 | 148 |
|
33.29536 | 4927.713 | 13368078 | 13368225 | 39 | 3131 | 6175.184 | 1.722780e+04 | 5.785473e+01 | 1.355876e+04 | 1.334797e+01 | 1.816554e+01 | -8.218088e+00 | -3.455134e-01 | -1.033390e+01 | -9.889318e+00 | 0.1608234 | FALSE | 0.5228326 | FALSE | C4orf51 | NM_001080531 NP_001074000 XM_006714289 XP_006714352 | inside intron | inside | 22627 | inside intron | -6199 | 2 | 6 | inside transcription region |
|
52592 | 52356 | 0.38 | FALSE |
| 494 | chr6 | 126024410 | 126024576 | 167 |
|
29.38551 | 4907.380 | 13417450 | 13417616 | 35 | 5548 | 2641.813 | 7.607162e+03 | 1.717665e+01 | 5.582389e+03 | 1.341317e+00 | 9.970060e-01 | -8.790766e+00 | -4.464756e-01 | -1.246949e+01 | -1.289747e+01 | 0.1629246 | FALSE | 0.5228326 | FALSE | RP1-293L8.2 | NR_038906 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.38 | FALSE |
| 495 | chr1 | 62676900 | 62677100 | 201 |
|
24.37239 | 4898.850 | 11180297 | 11180497 | 12 | 5031 | 5025.683 | 9.829711e+03 | 1.621729e+03 | 1.322866e+04 | 0.000000e+00 | 4.483159e+02 | -2.599616e+00 | 4.284456e-01 | -1.000000e+100 | -4.454561e+00 | 0.1631581 | FALSE | 0.5228326 | FALSE | L1TD1 | NM_001164835 NM_019079 NP_001158307 NP_061952 | inside exon | inside | 16426 | inside exon | 0 | 5 | 5 | overlaps 3'UTR |
|
17527 | 4743 | 0.38 | FALSE |
| 496 | chr3 | 78373034 | 78373198 | 165 |
|
29.66519 | 4894.756 | 8709082 | 8709246 | 15 | 2429 | 2740.307 | 8.319452e+03 | 2.758485e+01 | 5.353130e+03 | 1.369697e+00 | 0.000000e+00 | -8.236469e+00 | -6.361056e-01 | -1.256842e+01 | -1.000000e+100 | 0.1635472 | FALSE | 0.5228326 | FALSE | ROBO1 | NM_001145845 NM_002941 NM_133631 NP_001139317 NP_002932 NP_598334 XM_006713276 XM_006713277 XM_006713278 XP_006713339 XP_006713340 XP_006713341 | downstream | downstream | 364724 | NA | NA | NA | 23 | NA |
|
91534 | 60790 | 0.38 | FALSE |
| 497 | chr3 | 935099 | 935230 | 132 |
|
37.07277 | 4893.606 | 37179 | 37310 | 1 | 132 | 5847.203 | 1.090997e+04 | 7.555682e+01 | 1.825049e+04 | 0.000000e+00 | 0.000000e+00 | -7.173869e+00 | 7.422880e-01 | -1.000000e+100 | -1.000000e+100 | 0.1635472 | FALSE | 0.5228326 | FALSE | CNTN6 | NM_001289080 NM_001289081 NM_014461 NP_001276009 NP_001276010 NP_055276 XM_005265058 XP_005265115 | upstream | upstream | 199390 | NA | NA | NA | 8 | NA |
|
205433 | 124716 | 0.38 | FALSE |
| 498 | chr13 | 89167451 | 89167612 | 162 |
|
30.18837 | 4890.516 | 5640105 | 5640266 | 25 | 4104 | 2810.256 | 1.078954e+04 | 1.116667e+01 | 3.250259e+03 | 0.000000e+00 | 3.117284e-01 | -9.916220e+00 | -1.731007e+00 | -1.000000e+100 | -1.507898e+01 | 0.1637807 | FALSE | 0.5228326 | FALSE | LINC00433 | NR_047021 | NA | NA | 0 | NA | NA | NA | 3 | NA |
|
0 | 0 | 0.38 | FALSE |
| 499 | chr20 | 13342333 | 13342490 | 158 |
|
30.94373 | 4889.110 | 1486197 | 1486354 | 4 | 4259 | 2937.411 | 9.991494e+03 | 1.832278e+00 | 4.691547e+03 | 2.689873e-01 | 1.911392e+00 | -1.241285e+01 | -1.090637e+00 | -1.518087e+01 | -1.235186e+01 | 0.1639363 | FALSE | 0.5228326 | FALSE | TASP1 | NM_017714 NP_060184 XM_006723589 XM_006723590 XP_006723652 XP_006723653 XR_430268 | NA | NA | 0 | NA | NA | NA | 10 | NA |
|
0 | 0 | 0.38 | FALSE |
| 500 | chr10 | 78582804 | 78582946 | 143 |
|
34.17976 | 4887.705 | 7906606 | 7906748 | 14 | 1989 | 5011.389 | 1.363992e+04 | 4.394056e+01 | 1.136314e+04 | 5.416084e+00 | 4.524476e+00 | -8.278066e+00 | -2.634732e-01 | -1.129830e+01 | -1.155780e+01 | 0.1640142 | FALSE | 0.5228326 | FALSE | KCNMA1 | NM_001014797 NM_001161352 NM_001161353 NM_001271518 NM_001271519 NM_001271520 NM_001271521 NM_001271522 NM_002247 NP_001014797 NP_001154824 NP_001154825 NP_001258447 NP_001258448 NP_001258449 NP_001258450 NP_001258451 NP_002238 XM_005269776 XM_005269778 XM_005269779 XM_005269780 XM_005269781 XM_005269785 XM_005269787 XM_005269789 XM_005269792 XM_005269795 XM_005269796 XM_005269797 XM_005269800 XM_005269801 XM_005269803 XM_005269804 XM_006717821 XM_006717822 XM_006717823 XM_006717824 XM_006717825 XM_006717826 XM_006717827 XM_006717828 XM_006717829 XM_006717830 XP_005269833 XP_005269835 XP_005269836 XP_005269837 XP_005269838 XP_005269842 XP_005269844 XP_005269846 XP_005269849 XP_005269852 XP_005269853 XP_005269854 XP_005269857 XP_005269858 XP_005269860 XP_005269861 XP_006717884 XP_006717885 XP_006717886 XP_006717887 XP_006717888 XP_006717889 XP_006717890 XP_006717891 XP_006717892 XP_006717893 | downstream | downstream | 814631 | NA | NA | NA | 29 | NA |
|
768218 | 759773 | 0.38 | FALSE |
The following plots were made using ggbio (Yin, Cook, and Lawrence, 2012) which in turn uses ggplot2 (Wickham, 2009). For more details check plotCluster() in derfinder (Collado-Torres, Frazee, Jaffe, and Leek, 2014).
Below are the best 20 region clusters ordered by cluster area (sum of the area of regions inside a cluster). The region with the highest area in the cluster is shown with a red bar.
Below is the information on how the samples were permutted.
## h1 h1-bmp4 h1-mesendoderm h1-msc h1-npc
## Min. :0.0 Min. :0.0 Min. :0.0 Min. :0.0 Min. :0.0
## 1st Qu.:0.0 1st Qu.:0.0 1st Qu.:0.0 1st Qu.:0.0 1st Qu.:0.0
## Median :0.0 Median :0.0 Median :0.0 Median :0.0 Median :0.0
## Mean :0.4 Mean :0.4 Mean :0.4 Mean :0.4 Mean :0.4
## 3rd Qu.:1.0 3rd Qu.:1.0 3rd Qu.:1.0 3rd Qu.:1.0 3rd Qu.:1.0
## Max. :2.0 Max. :2.0 Max. :2.0 Max. :2.0 Max. :2.0
This table shows the summary per group of how many samples were assigned to the group. It can be used for fast detection of anomalies. Also note that 0 permutations out of 100 total permutations resulted in the same grouping as in the original observed data.
Note that in derfinder the re-sampling of the samples is done without replacement. This is done to avoid singular model matrices. While the sample balance is the same across the permutations, what changes are the adjusted variables (including the column medians).
The following table shows how the group labels were permuted. This can be useful to detect whether a permutation in particular had too many samples of a group labeled as another group, meaning that the resulting permuted group label resulted in pretty much a name change.
| permutation | group | h1 | h1-bmp4 | h1-mesendoderm | h1-msc | h1-npc |
|---|---|---|---|---|---|---|
| 1 | h1 | 1 | 0 | 0 | 1 | 0 |
| 1 | h1-bmp4 | 1 | 0 | 0 | 0 | 1 |
| 1 | h1-mesendoderm | 1 | 0 | 1 | 0 | 0 |
| 1 | h1-msc | 1 | 0 | 0 | 1 | 0 |
| 1 | h1-npc | 1 | 0 | 0 | 0 | 1 |
| 2 | h1 | 1 | 0 | 0 | 1 | 0 |
| 2 | h1-bmp4 | 0 | 0 | 0 | 1 | 1 |
| 2 | h1-mesendoderm | 0 | 1 | 1 | 0 | 0 |
| 2 | h1-msc | 1 | 1 | 0 | 0 | 0 |
| 2 | h1-npc | 0 | 0 | 1 | 0 | 1 |
| 3 | h1 | 0 | 0 | 0 | 2 | 0 |
| 3 | h1-bmp4 | 1 | 0 | 0 | 1 | 0 |
| 3 | h1-mesendoderm | 1 | 0 | 1 | 0 | 0 |
| 3 | h1-msc | 0 | 1 | 1 | 0 | 0 |
| 3 | h1-npc | 0 | 0 | 1 | 1 | 0 |
| 4 | h1 | 0 | 0 | 1 | 1 | 0 |
| 4 | h1-bmp4 | 1 | 1 | 0 | 0 | 0 |
| 4 | h1-mesendoderm | 1 | 1 | 0 | 0 | 0 |
| 4 | h1-msc | 0 | 0 | 1 | 0 | 1 |
| 4 | h1-npc | 1 | 0 | 1 | 0 | 0 |
| 5 | h1 | 0 | 0 | 1 | 0 | 1 |
| 5 | h1-bmp4 | 0 | 0 | 0 | 2 | 0 |
| 5 | h1-mesendoderm | 1 | 0 | 0 | 0 | 1 |
| 5 | h1-msc | 0 | 1 | 0 | 1 | 0 |
| 5 | h1-npc | 0 | 0 | 1 | 1 | 0 |
| 6 | h1 | 0 | 0 | 1 | 1 | 0 |
| 6 | h1-bmp4 | 0 | 1 | 0 | 1 | 0 |
| 6 | h1-mesendoderm | 0 | 0 | 0 | 2 | 0 |
| 6 | h1-msc | 1 | 1 | 0 | 0 | 0 |
| 6 | h1-npc | 0 | 1 | 1 | 0 | 0 |
| 7 | h1 | 0 | 0 | 1 | 1 | 0 |
| 7 | h1-bmp4 | 1 | 0 | 0 | 1 | 0 |
| 7 | h1-mesendoderm | 0 | 0 | 1 | 1 | 0 |
| 7 | h1-msc | 1 | 1 | 0 | 0 | 0 |
| 7 | h1-npc | 0 | 0 | 1 | 0 | 1 |
| 8 | h1 | 0 | 1 | 0 | 1 | 0 |
| 8 | h1-bmp4 | 0 | 2 | 0 | 0 | 0 |
| 8 | h1-mesendoderm | 0 | 0 | 0 | 2 | 0 |
| 8 | h1-msc | 1 | 0 | 0 | 1 | 0 |
| 8 | h1-npc | 1 | 0 | 0 | 0 | 1 |
| 9 | h1 | 0 | 0 | 0 | 1 | 1 |
| 9 | h1-bmp4 | 0 | 0 | 1 | 0 | 1 |
| 9 | h1-mesendoderm | 0 | 1 | 0 | 1 | 0 |
| 9 | h1-msc | 1 | 0 | 0 | 0 | 1 |
| 9 | h1-npc | 1 | 1 | 0 | 0 | 0 |
| 10 | h1 | 0 | 1 | 0 | 1 | 0 |
| 10 | h1-bmp4 | 0 | 1 | 0 | 1 | 0 |
| 10 | h1-mesendoderm | 0 | 0 | 1 | 1 | 0 |
| 10 | h1-msc | 0 | 1 | 0 | 0 | 1 |
| 10 | h1-npc | 0 | 0 | 1 | 0 | 1 |
| 11 | h1 | 0 | 0 | 1 | 0 | 1 |
| 11 | h1-bmp4 | 1 | 0 | 0 | 0 | 1 |
| 11 | h1-mesendoderm | 0 | 0 | 0 | 2 | 0 |
| 11 | h1-msc | 0 | 1 | 1 | 0 | 0 |
| 11 | h1-npc | 0 | 0 | 1 | 0 | 1 |
| 12 | h1 | 1 | 0 | 0 | 0 | 1 |
| 12 | h1-bmp4 | 0 | 1 | 0 | 1 | 0 |
| 12 | h1-mesendoderm | 1 | 1 | 0 | 0 | 0 |
| 12 | h1-msc | 1 | 0 | 1 | 0 | 0 |
| 12 | h1-npc | 0 | 1 | 0 | 0 | 1 |
| 13 | h1 | 0 | 1 | 0 | 1 | 0 |
| 13 | h1-bmp4 | 1 | 1 | 0 | 0 | 0 |
| 13 | h1-mesendoderm | 0 | 0 | 1 | 0 | 1 |
| 13 | h1-msc | 0 | 2 | 0 | 0 | 0 |
| 13 | h1-npc | 0 | 0 | 1 | 0 | 1 |
| 14 | h1 | 1 | 1 | 0 | 0 | 0 |
| 14 | h1-bmp4 | 0 | 0 | 0 | 2 | 0 |
| 14 | h1-mesendoderm | 0 | 1 | 1 | 0 | 0 |
| 14 | h1-msc | 1 | 1 | 0 | 0 | 0 |
| 14 | h1-npc | 0 | 0 | 0 | 1 | 1 |
| 15 | h1 | 0 | 1 | 0 | 1 | 0 |
| 15 | h1-bmp4 | 0 | 0 | 1 | 0 | 1 |
| 15 | h1-mesendoderm | 0 | 1 | 1 | 0 | 0 |
| 15 | h1-msc | 1 | 1 | 0 | 0 | 0 |
| 15 | h1-npc | 0 | 1 | 0 | 1 | 0 |
| 16 | h1 | 0 | 0 | 1 | 0 | 1 |
| 16 | h1-bmp4 | 0 | 1 | 0 | 0 | 1 |
| 16 | h1-mesendoderm | 0 | 0 | 0 | 1 | 1 |
| 16 | h1-msc | 0 | 1 | 1 | 0 | 0 |
| 16 | h1-npc | 0 | 1 | 1 | 0 | 0 |
| 17 | h1 | 0 | 1 | 0 | 1 | 0 |
| 17 | h1-bmp4 | 0 | 2 | 0 | 0 | 0 |
| 17 | h1-mesendoderm | 1 | 0 | 1 | 0 | 0 |
| 17 | h1-msc | 0 | 0 | 0 | 2 | 0 |
| 17 | h1-npc | 0 | 1 | 0 | 0 | 1 |
| 18 | h1 | 0 | 0 | 0 | 1 | 1 |
| 18 | h1-bmp4 | 1 | 1 | 0 | 0 | 0 |
| 18 | h1-mesendoderm | 0 | 0 | 0 | 0 | 2 |
| 18 | h1-msc | 0 | 0 | 0 | 2 | 0 |
| 18 | h1-npc | 1 | 1 | 0 | 0 | 0 |
| 19 | h1 | 1 | 1 | 0 | 0 | 0 |
| 19 | h1-bmp4 | 0 | 1 | 0 | 0 | 1 |
| 19 | h1-mesendoderm | 0 | 0 | 1 | 1 | 0 |
| 19 | h1-msc | 0 | 1 | 0 | 0 | 1 |
| 19 | h1-npc | 0 | 1 | 1 | 0 | 0 |
| 20 | h1 | 1 | 1 | 0 | 0 | 0 |
| 20 | h1-bmp4 | 1 | 1 | 0 | 0 | 0 |
| 20 | h1-mesendoderm | 1 | 1 | 0 | 0 | 0 |
| 20 | h1-msc | 0 | 0 | 1 | 1 | 0 |
| 20 | h1-npc | 0 | 0 | 1 | 1 | 0 |
| 21 | h1 | 0 | 1 | 0 | 0 | 1 |
| 21 | h1-bmp4 | 0 | 1 | 0 | 1 | 0 |
| 21 | h1-mesendoderm | 0 | 1 | 1 | 0 | 0 |
| 21 | h1-msc | 0 | 1 | 0 | 0 | 1 |
| 21 | h1-npc | 1 | 0 | 0 | 0 | 1 |
| 22 | h1 | 0 | 0 | 1 | 1 | 0 |
| 22 | h1-bmp4 | 1 | 0 | 1 | 0 | 0 |
| 22 | h1-mesendoderm | 0 | 0 | 1 | 1 | 0 |
| 22 | h1-msc | 0 | 0 | 1 | 1 | 0 |
| 22 | h1-npc | 1 | 0 | 0 | 0 | 1 |
| 23 | h1 | 0 | 1 | 1 | 0 | 0 |
| 23 | h1-bmp4 | 0 | 1 | 1 | 0 | 0 |
| 23 | h1-mesendoderm | 0 | 0 | 0 | 1 | 1 |
| 23 | h1-msc | 1 | 0 | 1 | 0 | 0 |
| 23 | h1-npc | 0 | 0 | 1 | 0 | 1 |
| 24 | h1 | 1 | 1 | 0 | 0 | 0 |
| 24 | h1-bmp4 | 1 | 0 | 0 | 0 | 1 |
| 24 | h1-mesendoderm | 0 | 0 | 1 | 0 | 1 |
| 24 | h1-msc | 0 | 1 | 0 | 1 | 0 |
| 24 | h1-npc | 0 | 0 | 0 | 0 | 2 |
| 25 | h1 | 0 | 1 | 0 | 0 | 1 |
| 25 | h1-bmp4 | 0 | 0 | 2 | 0 | 0 |
| 25 | h1-mesendoderm | 0 | 1 | 0 | 1 | 0 |
| 25 | h1-msc | 1 | 0 | 1 | 0 | 0 |
| 25 | h1-npc | 0 | 2 | 0 | 0 | 0 |
| 26 | h1 | 1 | 0 | 0 | 0 | 1 |
| 26 | h1-bmp4 | 0 | 0 | 1 | 0 | 1 |
| 26 | h1-mesendoderm | 0 | 1 | 0 | 0 | 1 |
| 26 | h1-msc | 0 | 1 | 1 | 0 | 0 |
| 26 | h1-npc | 0 | 0 | 0 | 1 | 1 |
| 27 | h1 | 0 | 1 | 1 | 0 | 0 |
| 27 | h1-bmp4 | 0 | 1 | 0 | 0 | 1 |
| 27 | h1-mesendoderm | 0 | 1 | 0 | 1 | 0 |
| 27 | h1-msc | 1 | 0 | 0 | 1 | 0 |
| 27 | h1-npc | 1 | 0 | 0 | 1 | 0 |
| 28 | h1 | 0 | 0 | 1 | 1 | 0 |
| 28 | h1-bmp4 | 1 | 0 | 0 | 0 | 1 |
| 28 | h1-mesendoderm | 0 | 1 | 1 | 0 | 0 |
| 28 | h1-msc | 0 | 0 | 1 | 0 | 1 |
| 28 | h1-npc | 0 | 1 | 1 | 0 | 0 |
| 29 | h1 | 0 | 1 | 1 | 0 | 0 |
| 29 | h1-bmp4 | 0 | 1 | 0 | 1 | 0 |
| 29 | h1-mesendoderm | 1 | 0 | 1 | 0 | 0 |
| 29 | h1-msc | 0 | 1 | 0 | 1 | 0 |
| 29 | h1-npc | 1 | 0 | 0 | 1 | 0 |
| 30 | h1 | 0 | 0 | 0 | 0 | 2 |
| 30 | h1-bmp4 | 0 | 0 | 1 | 0 | 1 |
| 30 | h1-mesendoderm | 0 | 0 | 0 | 1 | 1 |
| 30 | h1-msc | 1 | 0 | 0 | 1 | 0 |
| 30 | h1-npc | 2 | 0 | 0 | 0 | 0 |
| 31 | h1 | 1 | 1 | 0 | 0 | 0 |
| 31 | h1-bmp4 | 1 | 1 | 0 | 0 | 0 |
| 31 | h1-mesendoderm | 0 | 1 | 0 | 0 | 1 |
| 31 | h1-msc | 1 | 1 | 0 | 0 | 0 |
| 31 | h1-npc | 1 | 0 | 0 | 0 | 1 |
| 32 | h1 | 0 | 0 | 1 | 1 | 0 |
| 32 | h1-bmp4 | 0 | 0 | 1 | 1 | 0 |
| 32 | h1-mesendoderm | 1 | 1 | 0 | 0 | 0 |
| 32 | h1-msc | 0 | 1 | 0 | 1 | 0 |
| 32 | h1-npc | 0 | 0 | 1 | 1 | 0 |
| 33 | h1 | 0 | 0 | 2 | 0 | 0 |
| 33 | h1-bmp4 | 1 | 0 | 0 | 0 | 1 |
| 33 | h1-mesendoderm | 0 | 2 | 0 | 0 | 0 |
| 33 | h1-msc | 0 | 0 | 1 | 1 | 0 |
| 33 | h1-npc | 1 | 0 | 0 | 1 | 0 |
| 34 | h1 | 0 | 1 | 1 | 0 | 0 |
| 34 | h1-bmp4 | 0 | 1 | 1 | 0 | 0 |
| 34 | h1-mesendoderm | 0 | 0 | 1 | 1 | 0 |
| 34 | h1-msc | 0 | 0 | 0 | 0 | 2 |
| 34 | h1-npc | 1 | 0 | 1 | 0 | 0 |
| 35 | h1 | 0 | 1 | 1 | 0 | 0 |
| 35 | h1-bmp4 | 1 | 0 | 0 | 0 | 1 |
| 35 | h1-mesendoderm | 1 | 1 | 0 | 0 | 0 |
| 35 | h1-msc | 0 | 0 | 0 | 1 | 1 |
| 35 | h1-npc | 0 | 0 | 0 | 1 | 1 |
| 36 | h1 | 1 | 0 | 0 | 1 | 0 |
| 36 | h1-bmp4 | 0 | 0 | 1 | 1 | 0 |
| 36 | h1-mesendoderm | 1 | 0 | 1 | 0 | 0 |
| 36 | h1-msc | 1 | 0 | 0 | 0 | 1 |
| 36 | h1-npc | 0 | 0 | 0 | 0 | 2 |
| 37 | h1 | 0 | 1 | 0 | 1 | 0 |
| 37 | h1-bmp4 | 1 | 0 | 0 | 1 | 0 |
| 37 | h1-mesendoderm | 0 | 1 | 0 | 0 | 1 |
| 37 | h1-msc | 1 | 0 | 1 | 0 | 0 |
| 37 | h1-npc | 1 | 0 | 0 | 0 | 1 |
| 38 | h1 | 0 | 0 | 2 | 0 | 0 |
| 38 | h1-bmp4 | 1 | 0 | 0 | 0 | 1 |
| 38 | h1-mesendoderm | 1 | 0 | 0 | 1 | 0 |
| 38 | h1-msc | 0 | 0 | 1 | 0 | 1 |
| 38 | h1-npc | 0 | 1 | 0 | 0 | 1 |
| 39 | h1 | 0 | 0 | 0 | 2 | 0 |
| 39 | h1-bmp4 | 0 | 0 | 2 | 0 | 0 |
| 39 | h1-mesendoderm | 2 | 0 | 0 | 0 | 0 |
| 39 | h1-msc | 1 | 0 | 0 | 1 | 0 |
| 39 | h1-npc | 0 | 1 | 1 | 0 | 0 |
| 40 | h1 | 0 | 0 | 2 | 0 | 0 |
| 40 | h1-bmp4 | 0 | 0 | 1 | 1 | 0 |
| 40 | h1-mesendoderm | 0 | 0 | 0 | 0 | 2 |
| 40 | h1-msc | 0 | 1 | 1 | 0 | 0 |
| 40 | h1-npc | 2 | 0 | 0 | 0 | 0 |
| 41 | h1 | 0 | 0 | 0 | 1 | 1 |
| 41 | h1-bmp4 | 0 | 1 | 1 | 0 | 0 |
| 41 | h1-mesendoderm | 0 | 0 | 0 | 1 | 1 |
| 41 | h1-msc | 1 | 0 | 0 | 0 | 1 |
| 41 | h1-npc | 0 | 1 | 1 | 0 | 0 |
| 42 | h1 | 0 | 0 | 1 | 0 | 1 |
| 42 | h1-bmp4 | 0 | 1 | 1 | 0 | 0 |
| 42 | h1-mesendoderm | 1 | 0 | 0 | 0 | 1 |
| 42 | h1-msc | 1 | 0 | 0 | 0 | 1 |
| 42 | h1-npc | 1 | 1 | 0 | 0 | 0 |
| 43 | h1 | 0 | 0 | 0 | 0 | 2 |
| 43 | h1-bmp4 | 1 | 0 | 1 | 0 | 0 |
| 43 | h1-mesendoderm | 0 | 1 | 1 | 0 | 0 |
| 43 | h1-msc | 1 | 1 | 0 | 0 | 0 |
| 43 | h1-npc | 1 | 1 | 0 | 0 | 0 |
| 44 | h1 | 0 | 1 | 0 | 0 | 1 |
| 44 | h1-bmp4 | 0 | 0 | 0 | 2 | 0 |
| 44 | h1-mesendoderm | 0 | 1 | 0 | 1 | 0 |
| 44 | h1-msc | 0 | 1 | 1 | 0 | 0 |
| 44 | h1-npc | 0 | 1 | 0 | 1 | 0 |
| 45 | h1 | 1 | 1 | 0 | 0 | 0 |
| 45 | h1-bmp4 | 1 | 0 | 0 | 0 | 1 |
| 45 | h1-mesendoderm | 0 | 1 | 0 | 0 | 1 |
| 45 | h1-msc | 1 | 0 | 0 | 0 | 1 |
| 45 | h1-npc | 1 | 0 | 0 | 1 | 0 |
| 46 | h1 | 0 | 1 | 0 | 1 | 0 |
| 46 | h1-bmp4 | 1 | 1 | 0 | 0 | 0 |
| 46 | h1-mesendoderm | 1 | 0 | 1 | 0 | 0 |
| 46 | h1-msc | 1 | 0 | 0 | 0 | 1 |
| 46 | h1-npc | 2 | 0 | 0 | 0 | 0 |
| 47 | h1 | 1 | 0 | 0 | 1 | 0 |
| 47 | h1-bmp4 | 0 | 1 | 0 | 0 | 1 |
| 47 | h1-mesendoderm | 0 | 0 | 0 | 0 | 2 |
| 47 | h1-msc | 0 | 0 | 1 | 0 | 1 |
| 47 | h1-npc | 0 | 2 | 0 | 0 | 0 |
| 48 | h1 | 0 | 1 | 0 | 0 | 1 |
| 48 | h1-bmp4 | 1 | 0 | 1 | 0 | 0 |
| 48 | h1-mesendoderm | 1 | 0 | 0 | 0 | 1 |
| 48 | h1-msc | 0 | 1 | 0 | 1 | 0 |
| 48 | h1-npc | 0 | 0 | 1 | 1 | 0 |
| 49 | h1 | 0 | 0 | 1 | 0 | 1 |
| 49 | h1-bmp4 | 1 | 0 | 1 | 0 | 0 |
| 49 | h1-mesendoderm | 0 | 0 | 1 | 1 | 0 |
| 49 | h1-msc | 0 | 1 | 1 | 0 | 0 |
| 49 | h1-npc | 0 | 1 | 0 | 0 | 1 |
| 50 | h1 | 0 | 0 | 1 | 1 | 0 |
| 50 | h1-bmp4 | 1 | 1 | 0 | 0 | 0 |
| 50 | h1-mesendoderm | 1 | 1 | 0 | 0 | 0 |
| 50 | h1-msc | 1 | 0 | 0 | 1 | 0 |
| 50 | h1-npc | 0 | 0 | 0 | 2 | 0 |
| 51 | h1 | 0 | 1 | 0 | 1 | 0 |
| 51 | h1-bmp4 | 0 | 1 | 0 | 1 | 0 |
| 51 | h1-mesendoderm | 1 | 0 | 1 | 0 | 0 |
| 51 | h1-msc | 0 | 0 | 1 | 1 | 0 |
| 51 | h1-npc | 0 | 1 | 0 | 1 | 0 |
| 52 | h1 | 0 | 1 | 1 | 0 | 0 |
| 52 | h1-bmp4 | 0 | 1 | 0 | 0 | 1 |
| 52 | h1-mesendoderm | 0 | 0 | 2 | 0 | 0 |
| 52 | h1-msc | 0 | 1 | 1 | 0 | 0 |
| 52 | h1-npc | 0 | 0 | 0 | 1 | 1 |
| 53 | h1 | 1 | 0 | 0 | 1 | 0 |
| 53 | h1-bmp4 | 0 | 1 | 0 | 0 | 1 |
| 53 | h1-mesendoderm | 0 | 0 | 0 | 1 | 1 |
| 53 | h1-msc | 0 | 0 | 0 | 1 | 1 |
| 53 | h1-npc | 0 | 1 | 1 | 0 | 0 |
| 54 | h1 | 0 | 0 | 1 | 1 | 0 |
| 54 | h1-bmp4 | 0 | 0 | 1 | 0 | 1 |
| 54 | h1-mesendoderm | 1 | 0 | 0 | 0 | 1 |
| 54 | h1-msc | 0 | 1 | 0 | 1 | 0 |
| 54 | h1-npc | 1 | 0 | 0 | 0 | 1 |
| 55 | h1 | 1 | 0 | 0 | 0 | 1 |
| 55 | h1-bmp4 | 1 | 0 | 0 | 1 | 0 |
| 55 | h1-mesendoderm | 1 | 0 | 0 | 1 | 0 |
| 55 | h1-msc | 0 | 1 | 0 | 0 | 1 |
| 55 | h1-npc | 0 | 1 | 0 | 0 | 1 |
| 56 | h1 | 1 | 1 | 0 | 0 | 0 |
| 56 | h1-bmp4 | 1 | 1 | 0 | 0 | 0 |
| 56 | h1-mesendoderm | 1 | 1 | 0 | 0 | 0 |
| 56 | h1-msc | 0 | 0 | 1 | 0 | 1 |
| 56 | h1-npc | 1 | 0 | 0 | 1 | 0 |
| 57 | h1 | 0 | 0 | 1 | 0 | 1 |
| 57 | h1-bmp4 | 0 | 0 | 1 | 0 | 1 |
| 57 | h1-mesendoderm | 0 | 1 | 0 | 0 | 1 |
| 57 | h1-msc | 0 | 0 | 0 | 0 | 2 |
| 57 | h1-npc | 1 | 1 | 0 | 0 | 0 |
| 58 | h1 | 0 | 0 | 0 | 1 | 1 |
| 58 | h1-bmp4 | 0 | 0 | 1 | 1 | 0 |
| 58 | h1-mesendoderm | 0 | 1 | 1 | 0 | 0 |
| 58 | h1-msc | 0 | 2 | 0 | 0 | 0 |
| 58 | h1-npc | 0 | 0 | 0 | 2 | 0 |
| 59 | h1 | 0 | 1 | 0 | 0 | 1 |
| 59 | h1-bmp4 | 0 | 1 | 0 | 1 | 0 |
| 59 | h1-mesendoderm | 0 | 2 | 0 | 0 | 0 |
| 59 | h1-msc | 0 | 1 | 0 | 0 | 1 |
| 59 | h1-npc | 1 | 0 | 0 | 1 | 0 |
| 60 | h1 | 0 | 0 | 0 | 1 | 1 |
| 60 | h1-bmp4 | 0 | 1 | 1 | 0 | 0 |
| 60 | h1-mesendoderm | 1 | 0 | 0 | 1 | 0 |
| 60 | h1-msc | 1 | 1 | 0 | 0 | 0 |
| 60 | h1-npc | 0 | 1 | 0 | 0 | 1 |
| 61 | h1 | 0 | 1 | 1 | 0 | 0 |
| 61 | h1-bmp4 | 0 | 0 | 1 | 0 | 1 |
| 61 | h1-mesendoderm | 0 | 0 | 0 | 1 | 1 |
| 61 | h1-msc | 0 | 1 | 0 | 1 | 0 |
| 61 | h1-npc | 0 | 0 | 1 | 1 | 0 |
| 62 | h1 | 0 | 2 | 0 | 0 | 0 |
| 62 | h1-bmp4 | 1 | 0 | 0 | 0 | 1 |
| 62 | h1-mesendoderm | 0 | 0 | 0 | 1 | 1 |
| 62 | h1-msc | 0 | 1 | 0 | 0 | 1 |
| 62 | h1-npc | 0 | 0 | 0 | 2 | 0 |
| 63 | h1 | 1 | 1 | 0 | 0 | 0 |
| 63 | h1-bmp4 | 0 | 0 | 0 | 1 | 1 |
| 63 | h1-mesendoderm | 1 | 1 | 0 | 0 | 0 |
| 63 | h1-msc | 0 | 0 | 0 | 0 | 2 |
| 63 | h1-npc | 0 | 0 | 0 | 1 | 1 |
| 64 | h1 | 0 | 0 | 1 | 1 | 0 |
| 64 | h1-bmp4 | 0 | 1 | 1 | 0 | 0 |
| 64 | h1-mesendoderm | 1 | 0 | 0 | 1 | 0 |
| 64 | h1-msc | 1 | 0 | 0 | 0 | 1 |
| 64 | h1-npc | 0 | 0 | 1 | 1 | 0 |
| 65 | h1 | 1 | 0 | 0 | 1 | 0 |
| 65 | h1-bmp4 | 1 | 1 | 0 | 0 | 0 |
| 65 | h1-mesendoderm | 0 | 0 | 1 | 1 | 0 |
| 65 | h1-msc | 0 | 0 | 1 | 1 | 0 |
| 65 | h1-npc | 1 | 0 | 0 | 0 | 1 |
| 66 | h1 | 0 | 1 | 0 | 0 | 1 |
| 66 | h1-bmp4 | 0 | 0 | 1 | 1 | 0 |
| 66 | h1-mesendoderm | 1 | 1 | 0 | 0 | 0 |
| 66 | h1-msc | 0 | 0 | 0 | 1 | 1 |
| 66 | h1-npc | 0 | 0 | 1 | 1 | 0 |
| 67 | h1 | 1 | 0 | 0 | 0 | 1 |
| 67 | h1-bmp4 | 0 | 0 | 2 | 0 | 0 |
| 67 | h1-mesendoderm | 1 | 1 | 0 | 0 | 0 |
| 67 | h1-msc | 0 | 0 | 1 | 0 | 1 |
| 67 | h1-npc | 0 | 0 | 1 | 1 | 0 |
| 68 | h1 | 0 | 0 | 1 | 0 | 1 |
| 68 | h1-bmp4 | 0 | 0 | 0 | 1 | 1 |
| 68 | h1-mesendoderm | 0 | 1 | 1 | 0 | 0 |
| 68 | h1-msc | 1 | 1 | 0 | 0 | 0 |
| 68 | h1-npc | 1 | 0 | 0 | 0 | 1 |
| 69 | h1 | 0 | 1 | 0 | 1 | 0 |
| 69 | h1-bmp4 | 0 | 1 | 0 | 0 | 1 |
| 69 | h1-mesendoderm | 0 | 1 | 0 | 0 | 1 |
| 69 | h1-msc | 0 | 0 | 1 | 1 | 0 |
| 69 | h1-npc | 0 | 0 | 2 | 0 | 0 |
| 70 | h1 | 1 | 1 | 0 | 0 | 0 |
| 70 | h1-bmp4 | 0 | 0 | 0 | 1 | 1 |
| 70 | h1-mesendoderm | 0 | 1 | 0 | 0 | 1 |
| 70 | h1-msc | 0 | 0 | 1 | 0 | 1 |
| 70 | h1-npc | 0 | 1 | 0 | 0 | 1 |
| 71 | h1 | 0 | 0 | 1 | 1 | 0 |
| 71 | h1-bmp4 | 0 | 0 | 1 | 1 | 0 |
| 71 | h1-mesendoderm | 0 | 1 | 1 | 0 | 0 |
| 71 | h1-msc | 1 | 0 | 0 | 0 | 1 |
| 71 | h1-npc | 1 | 1 | 0 | 0 | 0 |
| 72 | h1 | 1 | 0 | 0 | 1 | 0 |
| 72 | h1-bmp4 | 1 | 0 | 0 | 0 | 1 |
| 72 | h1-mesendoderm | 0 | 0 | 0 | 2 | 0 |
| 72 | h1-msc | 1 | 0 | 0 | 0 | 1 |
| 72 | h1-npc | 1 | 0 | 1 | 0 | 0 |
| 73 | h1 | 1 | 0 | 0 | 0 | 1 |
| 73 | h1-bmp4 | 0 | 0 | 1 | 1 | 0 |
| 73 | h1-mesendoderm | 1 | 0 | 1 | 0 | 0 |
| 73 | h1-msc | 0 | 0 | 1 | 0 | 1 |
| 73 | h1-npc | 0 | 1 | 0 | 0 | 1 |
| 74 | h1 | 0 | 0 | 0 | 1 | 1 |
| 74 | h1-bmp4 | 0 | 1 | 0 | 0 | 1 |
| 74 | h1-mesendoderm | 0 | 1 | 0 | 1 | 0 |
| 74 | h1-msc | 1 | 0 | 1 | 0 | 0 |
| 74 | h1-npc | 0 | 1 | 0 | 1 | 0 |
| 75 | h1 | 0 | 0 | 1 | 0 | 1 |
| 75 | h1-bmp4 | 0 | 1 | 1 | 0 | 0 |
| 75 | h1-mesendoderm | 0 | 0 | 0 | 0 | 2 |
| 75 | h1-msc | 1 | 0 | 1 | 0 | 0 |
| 75 | h1-npc | 1 | 0 | 1 | 0 | 0 |
| 76 | h1 | 0 | 0 | 0 | 1 | 1 |
| 76 | h1-bmp4 | 0 | 0 | 1 | 1 | 0 |
| 76 | h1-mesendoderm | 0 | 0 | 0 | 1 | 1 |
| 76 | h1-msc | 1 | 0 | 0 | 1 | 0 |
| 76 | h1-npc | 1 | 1 | 0 | 0 | 0 |
| 77 | h1 | 1 | 0 | 0 | 0 | 1 |
| 77 | h1-bmp4 | 1 | 0 | 0 | 1 | 0 |
| 77 | h1-mesendoderm | 0 | 0 | 1 | 1 | 0 |
| 77 | h1-msc | 1 | 1 | 0 | 0 | 0 |
| 77 | h1-npc | 0 | 0 | 2 | 0 | 0 |
| 78 | h1 | 1 | 1 | 0 | 0 | 0 |
| 78 | h1-bmp4 | 0 | 1 | 0 | 1 | 0 |
| 78 | h1-mesendoderm | 0 | 0 | 1 | 1 | 0 |
| 78 | h1-msc | 2 | 0 | 0 | 0 | 0 |
| 78 | h1-npc | 0 | 0 | 1 | 0 | 1 |
| 79 | h1 | 0 | 0 | 1 | 0 | 1 |
| 79 | h1-bmp4 | 1 | 0 | 0 | 0 | 1 |
| 79 | h1-mesendoderm | 0 | 0 | 0 | 0 | 2 |
| 79 | h1-msc | 1 | 0 | 1 | 0 | 0 |
| 79 | h1-npc | 0 | 0 | 0 | 0 | 2 |
| 80 | h1 | 0 | 0 | 0 | 1 | 1 |
| 80 | h1-bmp4 | 1 | 0 | 0 | 0 | 1 |
| 80 | h1-mesendoderm | 0 | 0 | 2 | 0 | 0 |
| 80 | h1-msc | 0 | 0 | 0 | 1 | 1 |
| 80 | h1-npc | 0 | 0 | 1 | 0 | 1 |
| 81 | h1 | 1 | 0 | 1 | 0 | 0 |
| 81 | h1-bmp4 | 1 | 0 | 0 | 1 | 0 |
| 81 | h1-mesendoderm | 1 | 1 | 0 | 0 | 0 |
| 81 | h1-msc | 0 | 0 | 2 | 0 | 0 |
| 81 | h1-npc | 0 | 1 | 0 | 1 | 0 |
| 82 | h1 | 1 | 0 | 0 | 0 | 1 |
| 82 | h1-bmp4 | 0 | 1 | 0 | 1 | 0 |
| 82 | h1-mesendoderm | 1 | 1 | 0 | 0 | 0 |
| 82 | h1-msc | 0 | 0 | 1 | 1 | 0 |
| 82 | h1-npc | 0 | 1 | 1 | 0 | 0 |
| 83 | h1 | 1 | 0 | 1 | 0 | 0 |
| 83 | h1-bmp4 | 0 | 1 | 0 | 0 | 1 |
| 83 | h1-mesendoderm | 0 | 0 | 0 | 1 | 1 |
| 83 | h1-msc | 0 | 0 | 0 | 2 | 0 |
| 83 | h1-npc | 1 | 1 | 0 | 0 | 0 |
| 84 | h1 | 1 | 0 | 0 | 0 | 1 |
| 84 | h1-bmp4 | 0 | 0 | 1 | 0 | 1 |
| 84 | h1-mesendoderm | 0 | 0 | 1 | 0 | 1 |
| 84 | h1-msc | 1 | 0 | 0 | 1 | 0 |
| 84 | h1-npc | 1 | 1 | 0 | 0 | 0 |
| 85 | h1 | 0 | 0 | 1 | 1 | 0 |
| 85 | h1-bmp4 | 0 | 1 | 0 | 0 | 1 |
| 85 | h1-mesendoderm | 1 | 0 | 1 | 0 | 0 |
| 85 | h1-msc | 0 | 1 | 0 | 0 | 1 |
| 85 | h1-npc | 0 | 0 | 1 | 0 | 1 |
| 86 | h1 | 1 | 0 | 1 | 0 | 0 |
| 86 | h1-bmp4 | 1 | 0 | 0 | 0 | 1 |
| 86 | h1-mesendoderm | 0 | 0 | 1 | 0 | 1 |
| 86 | h1-msc | 0 | 0 | 1 | 1 | 0 |
| 86 | h1-npc | 0 | 1 | 0 | 0 | 1 |
| 87 | h1 | 0 | 1 | 0 | 0 | 1 |
| 87 | h1-bmp4 | 1 | 0 | 0 | 1 | 0 |
| 87 | h1-mesendoderm | 1 | 0 | 1 | 0 | 0 |
| 87 | h1-msc | 0 | 1 | 0 | 1 | 0 |
| 87 | h1-npc | 1 | 0 | 0 | 0 | 1 |
| 88 | h1 | 2 | 0 | 0 | 0 | 0 |
| 88 | h1-bmp4 | 0 | 0 | 1 | 1 | 0 |
| 88 | h1-mesendoderm | 1 | 0 | 0 | 0 | 1 |
| 88 | h1-msc | 0 | 0 | 1 | 0 | 1 |
| 88 | h1-npc | 0 | 1 | 0 | 1 | 0 |
| 89 | h1 | 2 | 0 | 0 | 0 | 0 |
| 89 | h1-bmp4 | 1 | 0 | 0 | 1 | 0 |
| 89 | h1-mesendoderm | 1 | 0 | 0 | 0 | 1 |
| 89 | h1-msc | 1 | 0 | 0 | 0 | 1 |
| 89 | h1-npc | 0 | 0 | 0 | 1 | 1 |
| 90 | h1 | 1 | 0 | 1 | 0 | 0 |
| 90 | h1-bmp4 | 1 | 0 | 1 | 0 | 0 |
| 90 | h1-mesendoderm | 1 | 0 | 1 | 0 | 0 |
| 90 | h1-msc | 0 | 1 | 1 | 0 | 0 |
| 90 | h1-npc | 0 | 1 | 1 | 0 | 0 |
| 91 | h1 | 1 | 0 | 0 | 0 | 1 |
| 91 | h1-bmp4 | 0 | 0 | 1 | 0 | 1 |
| 91 | h1-mesendoderm | 1 | 0 | 0 | 0 | 1 |
| 91 | h1-msc | 0 | 0 | 0 | 1 | 1 |
| 91 | h1-npc | 0 | 0 | 1 | 1 | 0 |
| 92 | h1 | 0 | 1 | 0 | 0 | 1 |
| 92 | h1-bmp4 | 1 | 0 | 1 | 0 | 0 |
| 92 | h1-mesendoderm | 0 | 0 | 0 | 0 | 2 |
| 92 | h1-msc | 0 | 0 | 0 | 1 | 1 |
| 92 | h1-npc | 1 | 1 | 0 | 0 | 0 |
| 93 | h1 | 0 | 1 | 0 | 0 | 1 |
| 93 | h1-bmp4 | 0 | 0 | 1 | 1 | 0 |
| 93 | h1-mesendoderm | 1 | 0 | 0 | 1 | 0 |
| 93 | h1-msc | 2 | 0 | 0 | 0 | 0 |
| 93 | h1-npc | 1 | 0 | 0 | 1 | 0 |
| 94 | h1 | 1 | 0 | 0 | 0 | 1 |
| 94 | h1-bmp4 | 2 | 0 | 0 | 0 | 0 |
| 94 | h1-mesendoderm | 1 | 0 | 0 | 0 | 1 |
| 94 | h1-msc | 0 | 0 | 1 | 1 | 0 |
| 94 | h1-npc | 0 | 1 | 1 | 0 | 0 |
| 95 | h1 | 1 | 0 | 0 | 1 | 0 |
| 95 | h1-bmp4 | 0 | 1 | 0 | 1 | 0 |
| 95 | h1-mesendoderm | 0 | 0 | 1 | 1 | 0 |
| 95 | h1-msc | 0 | 0 | 1 | 1 | 0 |
| 95 | h1-npc | 1 | 0 | 1 | 0 | 0 |
| 96 | h1 | 0 | 1 | 1 | 0 | 0 |
| 96 | h1-bmp4 | 1 | 0 | 0 | 0 | 1 |
| 96 | h1-mesendoderm | 0 | 1 | 1 | 0 | 0 |
| 96 | h1-msc | 0 | 1 | 0 | 1 | 0 |
| 96 | h1-npc | 0 | 0 | 1 | 1 | 0 |
| 97 | h1 | 1 | 0 | 1 | 0 | 0 |
| 97 | h1-bmp4 | 0 | 0 | 1 | 0 | 1 |
| 97 | h1-mesendoderm | 1 | 0 | 0 | 1 | 0 |
| 97 | h1-msc | 0 | 1 | 1 | 0 | 0 |
| 97 | h1-npc | 0 | 0 | 0 | 2 | 0 |
| 98 | h1 | 1 | 1 | 0 | 0 | 0 |
| 98 | h1-bmp4 | 0 | 0 | 1 | 0 | 1 |
| 98 | h1-mesendoderm | 1 | 1 | 0 | 0 | 0 |
| 98 | h1-msc | 0 | 0 | 1 | 0 | 1 |
| 98 | h1-npc | 1 | 0 | 1 | 0 | 0 |
| 99 | h1 | 1 | 0 | 1 | 0 | 0 |
| 99 | h1-bmp4 | 1 | 0 | 0 | 1 | 0 |
| 99 | h1-mesendoderm | 0 | 0 | 1 | 1 | 0 |
| 99 | h1-msc | 0 | 0 | 1 | 1 | 0 |
| 99 | h1-npc | 1 | 0 | 0 | 1 | 0 |
| 100 | h1 | 1 | 1 | 0 | 0 | 0 |
| 100 | h1-bmp4 | 0 | 0 | 0 | 1 | 1 |
| 100 | h1-mesendoderm | 0 | 1 | 0 | 1 | 0 |
| 100 | h1-msc | 1 | 0 | 0 | 0 | 1 |
| 100 | h1-npc | 0 | 1 | 0 | 1 | 0 |
The F-statistic cutoff used was 0.005 and type of cutoff used was theoretical. Furthermore, the maximum region (data) gap was set to and the maximum cluster gap was set to 3000.
This analysis was on each chromosome was performed with the following call to analyzeChr() (shown for one chromosome only):
## analyzeChr(chr = opt$chr, coverageInfo = covData, models = models,
## cutoffFstat = 0.005, nPermute = 100, seeds = seq_len(100) +
## 20131212, groupInfo = groupInfo, lowMemDir = file.path(tempdir(),
## opt$chr, "chunksDir"), colsubset = colsubset, adjustF = 1,
## maxClusterGap = 3000, mc.cores = opt$mcores)
The results were merged using the following call to mergeResults():
## mergeResults(prefix = "run4-v1.0.10", genomicState = GenomicState.Hsapiens.UCSC.hg19.knownGene[["fullGenome"]],
## optionsStats = optionsStats)
This report was generated in path /dcs01/lieber/ajaffe/Brain/derRuns/derSoftware/stem/derAnalysis using the following call to derfinderReport():
## derfinderReport(prefix = "run4-v1.0.10", browse = FALSE, nBestClusters = 20,
## fullCov = fullCov, device = "CairoPNG")
Date the report was generated.
## [1] "2014-11-24 17:02:34 EST"
Wallclock time spent generating the report.
## Time difference of 9.443 mins
R session information.
## setting value
## version R version 3.1.1 Patched (2014-10-16 r66782)
## system x86_64, linux-gnu
## ui X11
## language (EN)
## collate en_US.UTF-8
## tz
## package * version date source
## acepack 1.3.3.3 2013-05-03 CRAN (R 3.1.1)
## AnnotationDbi * 1.28.1 2014-10-29 Bioconductor
## base64enc 0.1.2 2014-06-26 CRAN (R 3.1.0)
## BatchJobs 1.5 2014-10-30 CRAN (R 3.1.1)
## BBmisc 1.8 2014-10-30 CRAN (R 3.1.1)
## bibtex 0.3.6 2013-07-29 CRAN (R 3.1.1)
## Biobase * 2.26.0 2014-10-15 Bioconductor
## BiocGenerics * 0.12.1 2014-11-15 Bioconductor
## BiocParallel 1.0.0 2014-10-15 Bioconductor
## biomaRt 2.22.0 2014-10-15 Bioconductor
## Biostrings 2.34.0 2014-10-15 Bioconductor
## biovizBase * 1.14.0 2014-10-15 Bioconductor
## bitops 1.0.6 2013-08-17 CRAN (R 3.1.0)
## brew 1.0.6 2011-04-13 CRAN (R 3.1.0)
## BSgenome 1.34.0 2014-10-15 Bioconductor
## bumphunter 1.6.0 2014-10-15 Bioconductor
## Cairo 1.5.6 2014-06-26 CRAN (R 3.1.0)
## checkmate 1.5.0 2014-10-19 CRAN (R 3.1.1)
## cluster 1.15.3 2014-09-04 CRAN (R 3.1.1)
## codetools 0.2.9 2014-08-21 CRAN (R 3.1.1)
## colorspace 1.2.4 2013-09-30 CRAN (R 3.1.0)
## DBI 0.3.1 2014-09-24 CRAN (R 3.1.1)
## derfinder * 1.0.10 2014-11-23 Bioconductor
## derfinderHelper 1.0.4 2014-11-05 Github (lcolladotor/derfinderHelper@27bcfe6)
## derfinderPlot 1.0.3 2014-11-05 Github (lcolladotor/derfinderPlot@8d076e3)
## devtools 1.6.1 2014-10-07 CRAN (R 3.1.1)
## dichromat 2.0.0 2013-01-24 CRAN (R 3.1.0)
## digest 0.6.4 2013-12-03 CRAN (R 3.1.0)
## doRNG 1.6 2014-03-07 CRAN (R 3.1.0)
## evaluate 0.5.5 2014-04-29 CRAN (R 3.1.0)
## fail 1.2 2013-09-19 CRAN (R 3.1.0)
## foreach 1.4.2 2014-04-11 CRAN (R 3.1.0)
## foreign 0.8.61 2014-03-28 CRAN (R 3.1.1)
## formatR 1.0 2014-08-25 CRAN (R 3.1.1)
## Formula 1.1.2 2014-07-13 CRAN (R 3.1.1)
## GenomeInfoDb * 1.2.3 2014-11-15 Bioconductor
## GenomicAlignments 1.2.1 2014-11-05 Bioconductor
## GenomicFeatures * 1.18.2 2014-10-29 Bioconductor
## GenomicFiles 1.2.0 2014-10-15 Bioconductor
## GenomicRanges * 1.18.3 2014-11-20 Bioconductor
## GGally 0.4.8 2014-08-26 CRAN (R 3.1.1)
## ggbio 1.14.0 2014-11-04 Bioconductor
## ggplot2 * 1.0.0 2014-05-21 CRAN (R 3.1.0)
## graph 1.44.0 2014-10-15 Bioconductor
## gridExtra * 0.9.1 2012-08-09 CRAN (R 3.1.1)
## gtable 0.1.2 2012-12-05 CRAN (R 3.1.0)
## highr 0.4 2014-10-23 CRAN (R 3.1.1)
## Hmisc 3.14.6 2014-11-22 CRAN (R 3.1.1)
## htmltools 0.2.6 2014-09-08 CRAN (R 3.1.1)
## httr 0.5 2014-09-02 CRAN (R 3.1.1)
## IRanges * 2.0.0 2014-10-15 Bioconductor
## iterators 1.0.7 2014-04-11 CRAN (R 3.1.0)
## knitcitations 1.0.4 2014-11-05 Github (cboettig/knitcitations@508de74)
## knitr * 1.8 2014-11-11 CRAN (R 3.1.1)
## knitrBootstrap 1.0.0 2014-11-19 Github (jimhester/knitrBootstrap@76c41f0)
## labeling 0.3 2014-08-23 CRAN (R 3.1.1)
## lattice 0.20.29 2014-04-04 CRAN (R 3.1.1)
## latticeExtra 0.6.26 2013-08-15 CRAN (R 3.1.0)
## locfit 1.5.9.1 2013-04-20 CRAN (R 3.1.0)
## lubridate 1.3.3 2013-12-31 CRAN (R 3.1.1)
## markdown 0.7.4 2014-08-24 CRAN (R 3.1.1)
## MASS 7.3.35 2014-09-30 CRAN (R 3.1.1)
## Matrix 1.1.4 2014-06-15 CRAN (R 3.1.1)
## matrixStats 0.10.3 2014-10-15 CRAN (R 3.1.1)
## memoise 0.2.1 2014-04-22 CRAN (R 3.1.0)
## mgcv * 1.8.3 2014-08-29 CRAN (R 3.1.1)
## mime 0.2 2014-09-26 CRAN (R 3.1.1)
## munsell 0.4.2 2013-07-11 CRAN (R 3.1.0)
## nlme * 3.1.118 2014-10-07 CRAN (R 3.1.1)
## nnet 7.3.8 2014-03-28 CRAN (R 3.1.1)
## OrganismDbi 1.8.0 2014-10-15 Bioconductor
## pkgmaker 0.22 2014-05-14 CRAN (R 3.1.0)
## plyr 1.8.1 2014-02-26 CRAN (R 3.1.0)
## proto 0.3.10 2012-12-22 CRAN (R 3.1.0)
## qvalue 1.40.0 2014-10-15 Bioconductor
## RBGL 1.42.0 2014-10-15 Bioconductor
## RColorBrewer * 1.0.5 2011-06-17 CRAN (R 3.1.0)
## Rcpp 0.11.3 2014-09-29 CRAN (R 3.1.1)
## RCurl 1.95.4.3 2014-07-29 CRAN (R 3.1.1)
## RefManageR 0.8.40 2014-10-29 CRAN (R 3.1.1)
## regionReport * 1.0.4 2014-11-24 Github (lcolladotor/regionReport@ba61191)
## registry 0.2 2012-01-24 CRAN (R 3.1.0)
## reshape 0.8.5 2014-04-23 CRAN (R 3.1.0)
## reshape2 1.4 2014-04-23 CRAN (R 3.1.0)
## RJSONIO 1.3.0 2014-07-28 CRAN (R 3.1.1)
## rmarkdown 0.3.3 2014-09-17 CRAN (R 3.1.1)
## R.methodsS3 1.6.1 2014-01-05 CRAN (R 3.1.0)
## rngtools 1.2.4 2014-03-06 CRAN (R 3.1.0)
## rpart 4.1.8 2014-03-28 CRAN (R 3.1.1)
## Rsamtools 1.18.2 2014-11-12 Bioconductor
## RSQLite 1.0.0 2014-10-25 CRAN (R 3.1.1)
## rstudioapi 0.1 2014-03-27 CRAN (R 3.1.1)
## rtracklayer 1.26.2 2014-11-12 Bioconductor
## S4Vectors * 0.4.0 2014-10-15 Bioconductor
## scales 0.2.4 2014-04-22 CRAN (R 3.1.0)
## sendmailR 1.2.1 2014-09-21 CRAN (R 3.1.1)
## stringr 0.6.2 2012-12-06 CRAN (R 3.1.0)
## survival 2.37.7 2014-01-22 CRAN (R 3.1.1)
## TxDb.Hsapiens.UCSC.hg19.knownGene * 3.0.0 2014-09-29 Bioconductor
## VariantAnnotation 1.12.4 2014-11-16 Bioconductor
## XML 3.98.1.1 2013-06-20 CRAN (R 3.1.0)
## xtable 1.7.4 2014-09-12 CRAN (R 3.1.1)
## XVector * 0.6.0 2014-10-15 Bioconductor
## yaml 2.1.13 2014-06-12 CRAN (R 3.1.1)
## zlibbioc 1.12.0 2014-10-15 Bioconductor
This report was created with regionReport (Collado-Torres, Jaffe, and Leek, 2014) using knitrBootstrap (Hester, 2014) to format the html while knitr (Xie, 2014) and rmarkdown (Allaire, McPherson, Xie, Wickham, et al., 2014) were running behind the scenes.
Citations made with knitcitations (Boettiger, 2014).
[1] J. Allaire, J. McPherson, Y. Xie, H. Wickham, et al. rmarkdown: Dynamic Documents for R. R package version 0.3.3. 2014. URL: http://CRAN.R-project.org/package=rmarkdown.
[2] C. Boettiger. knitcitations: Citations for knitr markdown files. R package version 1.0.4. 2014. URL: https://github.com/cboettig/knitcitations.
[3] L. Collado-Torres, A. C. Frazee, A. E. Jaffe and J. T. Leek. derfinder: Annotation-agnostic differential expression analysis of RNA-seq data at base-pair resolution. https://github.com/lcolladotor/derfinder - R package version 1.0.10. 2014. URL: http://www.bioconductor.org/packages/release/bioc/html/derfinder.html.
[4] L. Collado-Torres, A. E. Jaffe and J. T. Leek. regionReport: Generate HTML reports for exploring a set of regions. https://github.com/lcolladotor/regionReport - R package version 1.0.4. 2014. URL: http://www.bioconductor.org/packages/release/bioc/html/regionReport.html.
[5] J. Hester. knitrBootstrap: Knitr Bootstrap framework. R package version 1.0.0. 2014. URL: https://github.com/jimhester/.
[6] H. Wickham. ggplot2: elegant graphics for data analysis. Springer New York, 2009. ISBN: 978-0-387-98140-6. URL: http://had.co.nz/ggplot2/book.
[7] Y. Xie. “knitr: A Comprehensive Tool for Reproducible Research in R”. In: Implementing Reproducible Computational Research. Ed. by V. Stodden, F. Leisch and R. D. Peng. ISBN 978-1466561595. Chapman and Hall/CRC, 2014. URL: http://www.crcpress.com/product/isbn/9781466561595.
[8] T. Yin, D. Cook and M. Lawrence. “ggbio: an R package for extending the grammar of graphics for genomic data”. In: Genome Biology 13.8 (2012), p. R77.